| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,374,832 | A→G | intergenic (+215252/+46105) | unknown → / ← unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,374,832 | 0 | A | G | 98.7% | 185.2 / NA | 76 | intergenic (+215252/+46105) | unknown/unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (29/46); minor base C (1/0); total (30/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.34e-01 | |||||||||||
CCATTAACAATGTGGCGGAGGTCATCAATAACGACAAAGCCATGAAAGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCAAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACAAACAGATGTTTAAACTGATGCTGGACAGCCTGTTGAAGCATGACCCGTTCCTTGTACTTGCGGATTTCGACAG > 1/1374596‑1375067 | ccATTAACAATGTGGCGGAGGTCATCAATAACGACAAAGCCATGAAAGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGGAAAAAAACCCCCCGCACCGGCAAAATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGGGCGAATGTGGGAAACGCCGAAAAGGTGGGGgaa > 1:375416/1‑251 (MQ=255) aTTAACAATGTGGCGGAGGTCATCAATAACGACAAAGCCATGAAAGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTgaaga < 1:134425/251‑1 (MQ=255) aTTAACAATGTGGCGGAGGTCATCAATAACGACAAAGCCATGAAAGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAAAAACCCCCCGCCCCCGCAAAACGAAACGGGGGCTCAACCGCGCACTGACCCTAAGCACATTGGAACGCGCGCATGGGGGAATCGCCCGAAAGGTGGGGgaaga > 1:179305/1‑251 (MQ=255) ttAACAATGTGGCGGAGGTCATCAATAACGACAAAGCCATGAAAGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGG‑AAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTGAAAAAGGCCCCGGCACCCGCAACATGGAGCTGGGGCCCCACGGCCCAATGACCCTAGGCACAATTGACGGCGCGGATGTGGAAAACGCCGAAAAGGGGGGGGAAGaaa > 1:710250/1‑251 (MQ=255) tAACAATGTGGCGGAGGTCATCAATAACGACAAAGCCATGAAAGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGCCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGaaa < 1:643674/251‑1 (MQ=255) cAATGTGGCGGAGGTCATCAATAACGACAAAGCCATGAAAGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAAAAACCTCCGGCACCGGCAACATGAAGCTGGCGCTCCACGGGGCATTGACCTTAGGCACATTGGACGGCGCGAATGGGGGAAACGCCGAAAAGGGGGGGGAAGaaaaag > 1:485105/1‑249 (MQ=255) gCGGAGGTCATCAATAACGACAAAGCCATGAAAGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAACCTCCCGCACCGGCAACAAGAAACTGGCGCTCAACGGCGCATTTACCTTAGGCACATTGGACGGCGCGAATGTGGGAATCGCCGAAAAGGGGGGGGGAGAAAACGTGTTTAt > 1:339510/1‑251 (MQ=255) ggTCATCAATAACGACAAAGCCATGAAAGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGGAAAAAAACCTCCCGCACCGGCAACATGAAGCCGGCGCCCAACCGCGCCTTGACCTTAGGCACATTTGACGGCGCGAATGTGGGAAACGCCGAAAAGGGGGGGGAAGaaa > 1:613742/1‑236 (MQ=255) gTCATCAATAACGACAAAGCCATGAAAGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGaaaa < 1:65811/236‑1 (MQ=255) gTCATCAATAACGACAAAGCCATGAAAGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAAAAACCTCCCGCACCGGCAACATGAAACTGGCGCCCAAAGGCGCATTGACCCTAGGCACACTGGACGGCGCGAAAGGGGAAATCGCCGAAAAGGGGGGGGGAGAAAAAGGGTTTAtttttgg > 1:659513/1‑248 (MQ=255) aaTAACGACAAAGCCATGAAAGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAAAAGCCTCCGGCACCCGCAACATGAAACCGGCGCTCAACGGCGCCTTGCCCTTAGGCACAATGGACGGCGCGAAAGTGGAAAACGCCGAAATTGTGGGGGAAAAAAACGTGGTTATTTTCGGCcaca > 1:249182/1‑250 (MQ=255) aTAACGACAAAGCCATGAAAGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGGCCCCCGCCCCGGCAACAAGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACACTGGAAGGCGCGAATGTGGAAAACGCCGAAAAGGGGGGGGGAGAAAAAGCGGTTATTTTTGGCCacac > 1:664750/1‑250 (MQ=255) cGACAAAGCCATGAAAGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAg < 1:409934/251‑1 (MQ=255) aCAAAGCCATGAAAGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGTGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGaa < 1:18658/251‑1 (MQ=255) cAAAGCCATGAAAGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGaaa < 1:252913/251‑1 (MQ=255) aaaGCCATGAAAGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAg < 1:525537/251‑1 (MQ=255) aaaGCCATGAAAGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAg < 1:280472/251‑1 (MQ=255) aaaGCCATGAAAGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAg < 1:283549/251‑1 (MQ=255) gCCATGAAAGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTga < 1:464970/212‑1 (MQ=255) gCCATGAAAGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCacac < 1:126806/239‑1 (MQ=255) gCCATGAAAGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGGAAAAAAACCTCCGGCACCGGCAACATGAAACTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAAACGCCGAAATGGTGGGGGAAGAAAACGTGTTTATTTTTTGGCACACCGTAGaaaacgg > 1:296354/1‑247 (MQ=255) ccATGAAAGATCGCCTGCAAGTGGCGTTCCTGCGGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCg < 1:176543/249‑1 (MQ=255) ccATGAAAGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCg < 1:577758/249‑1 (MQ=255) aTGAAAGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAACCTCCCGCACCGGCAACATGAAGCTGGCGCTCCACGGCGCATTGACCTTTGGCACATTGGACGGCGCGAATGTGGAAAACGCCGAAATGGGGGGGGGAGAAAAAGGGTTTTTTTTCGGCCACCCCGTAGAAAGCGGgcg > 1:193787/1‑251 (MQ=255) aaGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAAAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGGGGGGGAAGAAAAAGGGTTTATTTTTGGCCACACCGTAGAAAACGGGCGCGAg > 1:108164/1‑251 (MQ=255) ccTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAg < 1:134496/251‑1 (MQ=255) cGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTAc < 1:399371/251‑1 (MQ=255) ttCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACaa < 1:405349/251‑1 (MQ=255) ccTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAAc < 1:433121/251‑1 (MQ=255) ccTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAAc < 1:781709/251‑1 (MQ=255) ccTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAAc < 1:360820/251‑1 (MQ=255) gATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAAAAGCCTCCCGCACCGGCCACATGAAGCTGGCGCTCCACGGCGCATTGACCTTTAGCCCACTGGACGGCGCGAAAGTGGAAAACGCCGAAATGGGGGGGGAAGAAAAAGGGGTTTTTTTCGGCCACACCGTAGAAAGCGGGCGGGAGGTATTAGCGAAAGGCTACAAACcccgcgg > 1:218780/1‑250 (MQ=255) aGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAAAAACCCCCGGCACCGGCAACATGAAACTGGCGCTCAAAGGCGCCTTGACCTTTGGCACATTGGACGGCGCGAATGTGGGAATCGCCGCAATTGGGGGGGAAGAAAACGGGTTTATTTTTGGCCACACCGTAGAAAGCGGGCGCGAGGTTTTATCGAAAGGCTACAAACCGCGCGATTACTACaaaag > 1:815128/1‑249 (MQ=255) ccTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACg < 1:146663/249‑1 (MQ=255) ccTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACg < 1:38541/249‑1 (MQ=255) ccTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACg < 1:574028/249‑1 (MQ=255) ccTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGc < 1:576668/250‑1 (MQ=255) gAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCCGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTTACCTTAGGCACATTGGACGGCGCGAAAGTGGAAAACGCCGAAATGGGGGGTGAAGAAAACGGGTTTATTTTCGGCCACACCGTAGAAAGCGTGGGCGAGTTATTAGCGAAAAGGTACAAACCGCCCGCTTACTACAAACGCAATcccgg > 1:806981/1‑248 (MQ=255) tCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTaaaa < 1:247587/251‑1 (MQ=255) tCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTaaaa < 1:786685/251‑1 (MQ=255) tCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACATTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTaaaa < 1:414839/251‑1 (MQ=255) aTTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAg < 1:163136/251‑1 (MQ=255) tCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAAc < 1:862877/251‑1 (MQ=255) cGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCa < 1:476583/251‑1 (MQ=255) gAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAg < 1:484028/178‑1 (MQ=255) gAGCAGATTTCCATGGCGGGTAAAAAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACCGCGCATTTACCTTAGGCACATTGGACGGCGCGGATGTGGAAATCGCCGAAATGGGGGGGGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAAGCTACAAACCGCGCGATTACTACAAACGCAATCCGGGGTTTAAAAGCGCTATTGATTTCTTTACCaa > 1:729706/1‑251 (MQ=255) aGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAAc < 1:164431/189‑1 (MQ=255) aTTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGc < 1:532518/249‑1 (MQ=255) ggCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACcgcg > 1:635396/1‑183 (MQ=255) gggTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCAATg > 1:478211/1‑251 (MQ=255) gTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATgg < 1:880763/219‑1 (MQ=255) cggcaACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACAAACAGATGTTTAAAc < 1:455266/251‑1 (MQ=255) cATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACAAAc < 1:196651/233‑1 (MQ=255) cATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACAAACAGATGTTTAAACTGATGc < 1:526297/251‑1 (MQ=255) gcgcTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACAAACAGATGTTTAAACTGATGCTGGACAGc > 1:451290/1‑249 (MQ=255) cAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACAAACAGATGTTTAAACTGATGCTGGACAGCCTGTTGa < 1:884081/251‑1 (MQ=255) cAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACAAACAGATGTTTAAACTGATGCTGGACAGCCTGTTGa < 1:488749/251‑1 (MQ=255) aCGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACaaa < 1:817116/215‑1 (MQ=255) gcgcATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACAAACAGATGTTTAAACTGATGCTGGACAGCCTGTTGAAGCa < 1:334763/250‑1 (MQ=255) gcgcATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACAAACAGATGTTTAAACTGATGCTGGACAGCCTGTTGAAGCa < 1:317880/250‑1 (MQ=255) gcgcATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACAAACAGATGTTTAAACTGATGCTGGACAGCCTGTTGAAGCa < 1:267859/250‑1 (MQ=255) gcATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACAAACAGATGTTTAAACTGATGCTGGACAGCCTGTTGAAGCATGa > 1:849446/1‑251 (MQ=255) aCCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACAAACAGATGTTTAAACTGATGCTGGACAGCCTGTTGAAGCATGACCCGtt > 1:42122/1‑251 (MQ=255) ccTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATgg > 1:680445/1‑165 (MQ=255) acaTTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACAAACAGATGTTTAAACTGATGCTGGACAGCCTGTTGa > 1:295863/1‑229 (MQ=255) acaTTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACAAACAGATGTTTAAACTGATGCTGGACAGCCTGTTGAAGCATGAcc < 1:219562/238‑1 (MQ=255) acaTTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACAAACAGATGTTTAAACTGATGCTGGACAGCCTGTTGAAGCATGACCCGTTCCt < 1:40127/245‑1 (MQ=255) acaTTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACAAACAGATGTTTAAACTGATGCTGGACAGCCTGTTGAAGCATGACCCGTTCCTTGTa > 1:116491/1‑249 (MQ=255) caTTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACAAACAGATGTTTAAAc < 1:786992/207‑1 (MQ=255) caTTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACAAACAGATGTTTAAACTGATGCTGGACAGCCTGTTGAAg > 1:622911/1‑230 (MQ=255) caTTGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACAAACAGATGTTTAAACTGATGCTGGACAGCCTGTTGAAGCATGACCCGTTCCTTGTACtt > 1:868335/1‑251 (MQ=255) ttGGACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACAAACAGATGTTTAAACTGATGCTGGACAGCCTGTTGAAGCATGACCCGTTCCTTGTACTTg > 1:667711/1‑250 (MQ=255) gACGGCGCGAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACAAACAGATGTTTAAACTGATGCTGGACAGCCTGTTGAAGCATGACCCGTTCCTTGTACTTGCgg < 1:104337/250‑1 (MQ=255) gAATGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACAAACAGATGTTTAAACTGATGCTGGACAGCCTGTTGAAGCATGACCCGTTCCTTGTACTTGCGGATTTCGACa > 1:426094/1‑251 (MQ=255) aaTGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACAAACAGATGTTTAAACTGATGCTGGACAGCCTGTTGAAGCATGACCCGTTCCTTGTACTTGCGGATTTCGACAg > 1:291894/1‑251 (MQ=255) aaTGTGGAAATCGCCGAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACAAACAGATGTTTAAACTGATGCTGGACAGCCTGTTGAAGCATGACCCGTTCCTTGTACTTGCGGATTTCGACAg > 1:462661/1‑251 (MQ=255) | CCATTAACAATGTGGCGGAGGTCATCAATAACGACAAAGCCATGAAAGATCGCCTGCAAGTGGCGTTCCTGCCGGATTATCGCGTCAGCCTGGCGGAAAAAATCATTCCGGCGGCGGACGTGTCCGAGCAGATTTCCATGGCGGGTAAAGAAGCCTCCGGCACCGGCAACATGAAGCTGGCGCTCAACGGCGCATTGACCTTAGGCACATTGGACGGCGCGAATGTGGAAATCGCCAAAATGGTGGGTGAAGAAAACGTGTTTATTTTCGGCCACACCGTAGAAAGCGTGCGCGAGTTATTAGCGAAAGGCTACAAACCGCGCGATTACTACAAACGCAATCCGGTGTTAAAAAGCGCTATGGATTTCTTAACCAAAGGCAAAGTCTGCCATGGCGACAAACAGATGTTTAAACTGATGCTGGACAGCCTGTTGAAGCATGACCCGTTCCTTGTACTTGCGGATTTCGACAG > 1/1374596‑1375067 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |