| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,373,207 | C→A | intergenic (+213627/+47730) | unknown → / ← unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,373,207 | 0 | C | A | 87.9% | 124.5 / ‑5.4 | 58 | intergenic (+213627/+47730) | unknown/unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base A (17/34); minor base G (7/0); total (24/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.15e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGCTTATGGCAAACCTGCAGCGAAAAAAAGCGGTCGCCATGTGAATTATCTTTCCATGGAATTTTTAATCGGTCGAATCACCGGCAATAATTTGATGAATCTCGGTTACTACGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGCGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTACCCATGGCACCGTTATAACCCGTCCAAAACGCAAAATATCGGCTTCGGCGGTAAAATCACGCCGATTAAAGGCGACAAATACGCTTGGGAGCCGAAACTCATCATTCAAGGCAAAGCCTTTGATTTG > 1/1372965‑1373448 | ggCTTATGGCAAACCTGCAGCGAAAAAAAGCGGTCGCCATGTGAATTATCTTTCCATGGAATTTTTAATCGGTCGAATCACCGGCAATAATTTGATGAATCTCGGTTACTACGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCGGCGGGGTTTTTTGATTTCCTGGCGGGGCTCGGa > 1:895895/1‑250 (MQ=255) ccTGCAGCGAAAAAAAGCGGTCGCCATGTGAATTATCTTTCCATGGAATTTTTAATCGGTCGAATCACCGGCAATAATTTGATGAATCTCGGTTACTACGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTTGGGCGTTTTGGGGCGGGGTTTTTTGGTTTCATGGCGGGGGTCGGACaaaaacccccccg > 1:730996/1‑242 (MQ=255) gTCGCCATGTGAATTATCTTTCCATGGAATTTTTAATCGGTCGAATCACCGGCAATAATTTGATGAATCTCGGTTACTACGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCt < 1:395096/240‑1 (MQ=255) cATGTGAATTATCTTTCTATGGAATTTTTGATCGGTCGAATCACCGGCAATAATTTGATGAATCTCGGTTACTACGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑gg < 1:342647/251‑1 (MQ=255) cATGTGAATTATCTTTCCATGGAATTTTTAATCGGTCGAATCACCGGCAATAATTTGATGAATCTCGGTTACTACGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑gg < 1:53832/251‑1 (MQ=255) cATGTGAATTATCTTTCCATGGAATTTTTAATCGGTCGAATCACCGGCAATAATTTGATGAATCTCGGTTACTACGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑gg < 1:881078/251‑1 (MQ=255) gtgAATTATCTTTCCATGGAATTTTTAATCGGTCGAATCACCGGCAATAATTTGATGAATCTCGGTTACTACGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTTGGGCGGTTGGCGGGGTGCTTTTTTGGTTTCATGGCGGGGCTCGGGCAAAAAG‑CCACCGGCGACGGCGTTCATTTCCAAA‑AC‑gggtt > 1:380047/1‑248 (MQ=255) cTTTCCATGGAATTTTTAATCGGTCGAATCACCGGCAATAATTTGATGAATCTCGGTTACTACGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAAGTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACa < 1:631167/251‑1 (MQ=255) tCCATGGAATTTTTAATCGGTCGAATCACCGGCAATAATTTGATGAATCTCGGTTACTACGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATc < 1:456889/251‑1 (MQ=255) aaTTTTTAATCGGTCGAATCACCGGCAATAATTTGATGAATCTCGGTTACTACGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCTGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGa < 1:342964/250‑1 (MQ=255) tttttAATCGGTCGAATCACCGGCAATAATTTGATGAATCTCGGTTACTACGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑gg < 1:390343/227‑1 (MQ=255) ttttAATCGGTCGAATCACCGGCAATAATTTGATGAATCTCGGTTACTACGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGAc < 1:753800/251‑1 (MQ=255) tCGGTCGAATCACCGGCAATAATTTGATGAATCTCGGTTACTACGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATg < 1:241272/251‑1 (MQ=255) gTCGAATCACCGGCAATAATTTGATGAATCTCGGTTACTACGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTTGCGGCGTGCTTTTTGGGTTCCATGGCGGAGCTCGGGCAAAAAG‑CCACCGGCTACGGcc > 1:217919/1‑200 (MQ=255) gTCGAATCACCGGCAATAATTTGATGAATCTCGGTTACTACGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCa < 1:273611/250‑1 (MQ=255) tCGAATCACCGGCAATAATTTGATGAATCTCGGTTACTACGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCaa < 1:157450/250‑1 (MQ=255) aaTCACCGGCAATAATTTGATGAATCTCGGTTACTACGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGa < 1:884862/234‑1 (MQ=255) cAATAATTTGATGAATCTCGGTTACTACGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTTGGTCGTTTTGGGGCGTGCTTTTTTGATTCCCTGGCGGAGCCCGGGCAAAAAC‑CCCCCCGCCACGGCTTTCATTACCAAA‑AA‑GGTTTATTTTAAAAAAATTTTTTAGACGGTATGCaaaaaaaaaaaa > 1:863612/1‑246 (MQ=255) aatTTGATGAATCTCGGTTACTACGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTTGG‑GGTTTGGGGGGGGGCTTTTTGGGTTCCCTGGGGGGGGTCGGGCCAAAAG‑CCACCCGCTCCGGCTTGCATTACCCAT‑ACGGGTTTTTTTAAA‑AATCTTTTTAAGACgggaatcaaaaaaaaaaaacctatttt > 1:358468/1‑226 (MQ=255) gaATCTCGGTTACTACGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAAGGCGTTTTGGGGCGGGCGTTTTGGTTTCCATGGGGGAGGTCCGGCAAAAAGACCA‑CGGCTACGGCTTGCATTACCAAT‑AC‑GGGTTTTTTTAACAAACTTTTGAAAACGGGATGCAAAAAAAAAAAGCTGATCTTTGGTcg > 1:62107/1‑250 (MQ=255) cGGTTACTACGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTTGGGCGTTTGGGGGGGGGGTTTTTTGGTTTCATGGCGGGGCTCGGGCAAAAAG‑CCACCCGCTACGGCTTGCCTTACCAAT‑AA‑GGGTTTTTTTAACAATATTTTTAAAACGGGATGTAAAAAAAAAAAACTGATCTGTTGTTGCG‑Caaaa > 1:521405/1‑249 (MQ=255) cGGTTACTACGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTgg < 1:295819/241‑1 (MQ=255) tactacGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGGCGTTTTGGGGCGGGCTTTTTGGGTTCCATGGCGGGGCTCGGGCAAAACG‑CCCCCGGCTACGGCCTGCATTTCCAAA‑ACGGGTTTTTTTAAA‑AATCTTTTTAAGACGGTATGCAAAAAGAAAAAGCTGATc > 1:752034/1‑232 (MQ=255) tacGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTAccc < 1:443384/251‑1 (MQ=255) cgacgaCATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGGTCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTACCCAt < 1:669402/251‑1 (MQ=255) cATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑Ac < 1:371498/169‑1 (MQ=255) cTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTACCCATGGCACCGTTATAAcc < 1:705198/251‑1 (MQ=255) cTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTACCCATGGCACCGTTATAAcc < 1:496552/251‑1 (MQ=255) cTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTACCCATGGCACCGTTATAAcc < 1:897954/251‑1 (MQ=255) cTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGGCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTACCCATGGCACCGTTATAAcc < 1:445689/251‑1 (MQ=255) cAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTACCCATGGCACCGTTATAACCCGTCCaa < 1:391241/250‑1 (MQ=255) cAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTACCCATGGCACCGTTATAACCCGTCCaa < 1:649724/250‑1 (MQ=255) aTGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTTGGTCGTTTTGCGGCGGGCTTTTTTGATTTCATGGCGGAGCTCGGACAAAACG‑CCACCCGCTACGGCTTTCATTACCAAT‑AC‑GGGTTTTTTAAACAATCTTTTTAAGACGGGATGCAAAAAAAAAAAACTGATCTGTGGGCGCG‑CAACAGCTACCCACGGCACCGTTATAAACCGTCCAAAACGCaaaaa > 1:719362/1‑250 (MQ=255) gtgGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGa < 1:118331/164‑1 (MQ=255) gAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTTGGTCGTTTTGCGGCGGGCTTTTTTGGTTCCATGGCGGAGCTCGGGCAAAAAG‑CCACCCGCCACGGCTTGCATTTCCAAT‑AC‑GGGTTTTTTTAACAAACTTTTTTAAACGGTATGCAAAAAAAAAAAACTGATCTGTGGGCGCG‑CAACAACTACCCCTGGCACCCTTATaaaccctccca > 1:750149/1‑227 (MQ=255) gAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTTGGGCGTTTTGGGGCGGGCTTTTTTGGTTCCATGGCGGAGGTCGGACAAAACA‑CCCCCCGCCACCGCCTGCATTACCAATAAG‑GGTTTTTTTAAA‑AAACTTTTTAAAACGGGATGCAAAAAAAAAAAACTGATCTGTGGGCGCGCCAAAACCAACCC‑TGGCACCGGTATAAACCCTCCAAAACGCaaaaaaacgg > 1:881860/1‑245 (MQ=255) ggTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGGCGGTTTGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAAAG‑CCACCGGCCACGGCTTTCATTACCCAT‑AC‑GGGTTATTTAAACAAACTTTTGAAGACGGGATGCAAGAAAAAAAAGCTGATCTGTGGTCGCG‑CAACAACCACCCCTGGCACCGTTATAAACCGTCCCAAACGCAAAAAATccgcctcg > 1:444174/1‑244 (MQ=255) ggAGCGGGATCCCGCATTAGGTAACGGCGGTTTTTGGCGTTTGGGGGCGGGGTTTTTTGATTTCATGGCGGGGCTCGGGCAAAAAG‑CCACCGGCTACGGCTTGCATTACCAAT‑AA‑GGTTTTTTTTAAAAAACTTTTTAAGACGGGATGCAAAAAAAAAAAGCTGATCTGTGGGCGCG‑CAAAAGCTACCCAAGGCAACGTTATAAACCGTCCCAAAAGCAAAATATCGGGTTCGGCGGGAAAAACACGcccg > 1:867426/1‑249 (MQ=255) ggAGCGGGATCCCGCATTAGGTAACGGCGGTTTTGGTCGTTTTGCGGCGTGCTTTTTGGGTTTCCTTGCGGAGCTCGGACAAAAAG‑CCCCCGGCTACGGCTTGCCTTACCAAT‑AC‑GGGTTTTTTTAACAATCTTTTTAAAACGGGATGCAAAAAAAAAACCCTGATCTGTGGGCGCG‑CAACAACTACCCCTGGCACCGCTATAAACCCCCCAAAAAGCAAAAAATccgccttggcggggaaaaatgtct > 1:688986/1‑226 (MQ=255) aTCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTACCCATGGCACCGTTATAACCCGTCCAAAACGCAAAATATCGGCTTCGGCGGTAAAATCACGCCGATTAAAgg < 1:112499/250‑1 (MQ=255) gTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTACCCATGGCACCGTTATAACCCGTCCAAAACGCAAAATATCGGCTTCGGCGGTAAAATCACGCCGATTAAAGGCGACAAATACGc < 1:242196/250‑1 (MQ=255) aaCGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTACCCATGGCACCGTTATAACCCGTCCAAAACGCAAAATATCGGCTTCGGCGGTAAAATCACGCCGATTAAAGGCGACAAATACGCTTg < 1:680728/251‑1 (MQ=255) cggcggTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTACCCATGGCACCGTTATAAcc < 1:107964/182‑1 (MQ=255) cggcggTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAAAG‑CCACCGGCTACGGCTTGCATTACCCAT‑AC‑GGGTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTgg > 1:500790/1‑148 (MQ=255) ggTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCa < 1:227488/83‑1 (MQ=255) ggTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTACCCATGGCACCGTTATAACCCGTCCAAAACGCAAAATATCGGCTTCGGCGGTAAAATCACGCCGATTAAAGGCGACAAATACGCTTGGGAGc > 1:338073/1‑250 (MQ=255) gTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTACCCATGGCACCGTTATAACCCGTCCAAAACGCAAAATATCGGCTTCGGCGGTAAAAt > 1:814847/1‑205 (MQ=255) ttGGCGGCGTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTACCCATGGCACCGTTATAACCCGTCCAAAACGCAAAATATCGGCTTCGGCGGTAAAATCACGCCGATTAAAGGCGACAAATACGCTTGGGAGCCGAAACTcatcat > 1:723550/1‑251 (MQ=255) cgTGCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTACCCATGGCACCGTTATAACCCGTCCAAAACGCAAAATATCGGCTTCGGCGGTAAAATCACGCCGATTAAAGGCGACAAATACGCTTGGGAGCCGAAACTCATCATTCAAGGc < 1:216181/251‑1 (MQ=255) gCTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTACCCATGGCACCGTTATAACCCGTCCAAAACGCAAAATATCGGCTTCGGCGGTAAAATCACGCCGATTAAAGGCGACAAAAACGCTTGGGAGCCGAAACTCATCATTCAAGGCaaa > 1:542106/1‑251 (MQ=255) cTTTTTGGATTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑Ac < 1:491821/64‑1 (MQ=255) aTTCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTACCCATGGCACCGTTATAACCCGTCCAAAACGCAAAATATCGGCTTCGGCGGTAAAATCACGCCGATTAAAGGCGACAAATACGCTTGGGAGCCGAAACTCATCATTCAAGGCAAAGCCTTTGAt < 1:114081/251‑1 (MQ=255) ttCCATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTACCCATGGCACCGTTATAACCCGTCCAAAACGCAAAATATCGGCTTCGGCGGTAAAATCACGCCGATTAAAGGCGACAAATACGCTTGGGAGCCGAAACTCATCATTCAAGGCAAAGCCTTTGAtt > 1:105940/1‑251 (MQ=255) ccATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTAccc < 1:85862/127‑1 (MQ=255) ccATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTACCCATGGCACCGTTATAACCCGTCCAAAACGCAAAATATCGGCTTCGGCGGTAAAATCACGCCGATTAAAGGCGACAAATACGc < 1:828906/208‑1 (MQ=255) ccATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTACCCATGGCACCGTTATAACCCGTCCAAAACGCAAAATATCGGCTTCGGCGGTAAAATCACGCCGATTAAAGGCGACAAATACGCTTGGGAGCCGAAACTCATCATTCAAGGCAAAGCCTTTGa > 1:354804/1‑247 (MQ=255) ccATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTACCCATGGCACCGTTATAACCCGTCCAAAACGCAAAATATCGGCTTCGGCGGTAAAATCACGCCGATTAAAGGCGACAAATACGCTTGGGAGCCGAAACTCATCATTCAAGGCAAAGCCTTTGATTTg > 1:839858/1‑251 (MQ=255) ccATGGCGGAGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTACCCATGGCACCGTTATAACCCGTCCAAAACGCAAAATATCGGCTTCGGCGGTAAAATCACGCCGATTAAAGGCGACAAATACGCTTGGGAGCCGAAACTCATCATTCAAGGCAAAGCCTTTGATTTg > 1:152555/1‑251 (MQ=255) | GGCTTATGGCAAACCTGCAGCGAAAAAAAGCGGTCGCCATGTGAATTATCTTTCCATGGAATTTTTAATCGGTCGAATCACCGGCAATAATTTGATGAATCTCGGTTACTACGACGACATTAAAGCCTATTTGGCAAAATACGATGTGGAACTGGTAGATGTGTTGGAACAGGAGCGGGATCCCGCATTAGGTAACGGCGGTTTAGGTCGTTTGGCGGCGTGCTTTTTGGATTCCATGGCGGCGCTCGGACAAAACG‑CCACCGGCTACGGCTTGCATTACCAAT‑AC‑GGTTTATTTAAACAATCTTTTGAAGACGGTATGCAAAAAGAAAACGCTGATCTGTGGTCGCG‑CAACAGCTACCCATGGCACCGTTATAACCCGTCCAAAACGCAAAATATCGGCTTCGGCGGTAAAATCACGCCGATTAAAGGCGACAAATACGCTTGGGAGCCGAAACTCATCATTCAAGGCAAAGCCTTTGATTTG > 1/1372965‑1373448 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |