Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,364,815 G→A intergenic (+205235/+56122) unknown → / ← unknown tRNA‑Val‑GAC/tRNA‑Met‑CAT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,364,8150GA100.0% 224.0 / NA 81intergenic (+205235/+56122)unknown/unknowntRNA‑Val‑GAC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (41/40);  total (41/40)

ATCTACCGCCACGCCCACATTGATGTATTTTTTCAGGATCAAACGTTGGGCATCTTCGGTAATGGAGCTGTTGAAACGCGGGAAGGCTTCCAACGCTTTGGCAACGGCTTTCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAGTTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCTTGAATATCTTCTTTTAAAATACGACCCTTACGACCTGTGCCTTTTACTTTATCCAGGTT  >  1/1364569‑1365054
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                               
aTCTACCGCCACGCCCACATTGATGTATTTTTTCAGGATCAAACGTTGGACATCTTCGGTAATGGAGCTGTTGAAACGCGGGAAGGCTTCCAACGCTTTGGCAACGGCTTTCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTa                                                                                                                                                                                                                                              >  1:731043/1‑250 (MQ=255)
aTCTACCGCCACGCCCACATTGATGTATTTTTTCAGGATCAAACGTTGGACATCTTCGGTAATGGAGCTGTTGAAACGCGGGAAGGCTTCCAACGCTTTGGCAACGGCTTTCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTAc                                                                                                                                                                                                                                             <  1:564643/251‑1 (MQ=255)
aTCTACCGCCACGCCCACATTGATGTATTTTTTCAGGATCAAACGTTGGACATCTTCGGTAATGGAGCTGTTGAAACGCGGGAAGGCTTCCAACGCTTTGGCAACGGCTTTCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTAc                                                                                                                                                                                                                                             <  1:290779/251‑1 (MQ=255)
aTCTACCGCCACGCCCACATTGATGTATTTTTTCAGGATCAAACGTTGGACATCTTCGGTAATGGAGCTGTTGAAACGCGGGAAGGCTTCCAACGCTTTGGCAACGGCTTTCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTAc                                                                                                                                                                                                                                             <  1:500227/251‑1 (MQ=255)
 tCTACCGCCACGCCCACATTGATGTATTTTTTCAGGATCAAACGTTGGACATCTTCGGTAATGGAGCTGTTGAAACGCGGGAAGGCTTCCAACGCTTTGGCAACGGCTTTCATAATGAAGACCACAGGGGTGATTTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTa                                                                                                                                                                                                                                              >  1:509736/1‑250 (MQ=255)
          aCGCCCACATTGATGTATTTTTTCAGGATCAAACGTTGGACATCTTCGGTAATGGAGCTGTTGAAACGCGGGAAGGCTTCCAACGCTTTGGCAACGGCTTTCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAAtt                                                                                                                                                                                                                                   <  1:654609/251‑1 (MQ=255)
            gCCCACATTGATGTATTTTTTCAGGATCAAACGTTGGACATCTTCGGTAATGGAGCTGTTGAAACGCGGGAAGGCTTCCAACGCTTTGGCAACGGCTTTCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCg                                                                                                                                                                                                                                 >  1:578395/1‑251 (MQ=255)
            gCCCACATTGATGTATTTTTTCAGGATCAAACGTTAGACATCTTCGGTAATGGAGCTGTTGAAACGCGGGAAGGCTTCCAACGCTTTGGCAACGGCTTTCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAAtt                                                                                                                                                                                                                                   >  1:894696/1‑249 (MQ=255)
                     gATGTATTTTTTCAGGATCAAACGTTGGACATCTTCGGTAATGGAGCTGTTGAAACGCGGGAAGGCTTCCAACGCTTTGGCAACGGCTTTCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGaaa                                                                                                                                                                                                                        >  1:496932/1‑251 (MQ=255)
                             ttttCAGGATCAAACGTTGGACATCTTCGGTAATGGAGCTGTTGAAACGCGGGAAGGCTTCCAACGCTTTGGCAACGGCTTTCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCttgttg                                                                                                                                                                                                                <  1:695732/251‑1 (MQ=255)
                             ttttCAGGATCAAACGTTGGACATCTTCGGTAATGGAGCTGTTGAAACGCGGGAAGGCTTCCAACGCTTTGGCAACGGCTTGCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCttgttg                                                                                                                                                                                                                <  1:430092/251‑1 (MQ=255)
                                   ggATCAAACGTTGGACATCTTCGGTAATGGAGCTGTTGAAACGCGGGAAGGCTTCCAACGCTTTGGCAACGGCTTTCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGa                                                                                                                                                                                                          >  1:872096/1‑251 (MQ=255)
                                    gATCAAACGTTGGACATCTTCGGTAATGGAGCTGTTGAAACGCGGGAAGGCTTCCAACGCTTTGGCAACGGCTTTCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGa                                                                                                                                                                                                          >  1:486206/1‑250 (MQ=255)
                                          aCGTTGGACATCTTCGGTAATGGAGCTGTTGAAACGCGGGAAGGCTTCCAACGCTTTGGCAACGGCTTTCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAAtt                                                                                                                                                                                                   >  1:845721/1‑251 (MQ=255)
                                           cGTTGGACATCTTCGGTAATGGAGCTGTTGAAACGCGGGAAGGCTTCCAACGCTTTGGCAACGGCTTTCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTc                                                                                                                                                                                                  <  1:598071/251‑1 (MQ=255)
                                             ttGGACATCTTCGGTAATGGAGCTGTTGAAACGCGGGAAGGCTTCCAACGCTTTGGCAACGGCTTTCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCa                                                                                                                                                                                                >  1:597969/1‑251 (MQ=255)
                                                        cGGTAATGGAGCTGTTGAAACGCGGGAAGGCTTCCAACGCTTTGGCAACGGCTTTCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTa                                                                                                                                                                                                                                              >  1:182989/1‑194 (MQ=255)
                                                        cGGTAATGGAGCTGTTGAAACGCGGGAAGGCTTCCAACGCTTTGGCAACGGCTTTCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAAtt                                                                                                                                                                                                                                   >  1:231559/1‑205 (MQ=255)
                                                          gTAATGGAGCTGTTGAAACGCGGGAAGGCTTCCAACGCTTTGGCAACGGCTTTCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGAttt                                                                                                                                                                                    >  1:182501/1‑250 (MQ=255)
                                                                   cTGTTGAAACGCGGGAAGGCTTCCAACGCTTTGGCAACGGCTTTCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAAt                                                                                                                                                                            <  1:337769/249‑1 (MQ=255)
                                                                     gTTGAAACGCGGGAAGGCTTCCAACGCTTTGGCAACGGCTTTCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAAtttt                                                                                                                                                                         >  1:740742/1‑250 (MQ=255)
                                                                     gTTGAAACGCGGGAAGGCTTCCAACGCTTTGGCAACGGCTTTCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAAtttt                                                                                                                                                                         >  1:727982/1‑250 (MQ=255)
                                                                         aaaCGCGGGAAGGCTTCCAACGCTTTGGCAACGGCTTTCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGaa                                                                                                                                                                    >  1:226414/1‑251 (MQ=255)
                                                                                              gCTTTGGCAACGGCTTTCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTaa                                                                                                                                               >  1:160119/1‑251 (MQ=255)
                                                                                                        cGGCTTTCATAATGAAGACCACAGGGGCGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGCTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTaaa                                                                                                                                     >  1:164305/1‑251 (MQ=255)
                                                                                                         ggCTTTCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGcc                                                                                                                                         >  1:421313/1‑246 (MQ=255)
                                                                                                              tCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATa                                                                                                                                                                                                             >  1:402968/1‑173 (MQ=255)
                                                                                                               cATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCAc                                                                                                                              <  1:865014/251‑1 (MQ=255)
                                                                                                                  aaTGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGcc                                                                                                                                                      <  1:686938/224‑1 (MQ=255)
                                                                                                                   aTGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATc                                                                                                                                                                                                                      >  1:643757/1‑159 (MQ=255)
                                                                                                                   aTGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTc                                                                                                                                                                                                  <  1:587876/179‑1 (MQ=255)
                                                                                                                     gAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTcg                                                                                                                        >  1:157521/1‑251 (MQ=255)
                                                                                                                      aaGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTcgc                                                                                                                       <  1:782225/251‑1 (MQ=255)
                                                                                                                        gACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACtt                                                                                                                                                                                                       >  1:898818/1‑169 (MQ=255)
                                                                                                                        gACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTcgccg                                                                                                                     >  1:334214/1‑251 (MQ=255)
                                                                                                                          ccACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGcc                                                                                                                                                      >  1:899024/1‑216 (MQ=255)
                                                                                                                          ccACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCAc                                                                                                                              <  1:760110/240‑1 (MQ=255)
                                                                                                                               ggggTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCAc                                                                                                                              >  1:558211/1‑235 (MQ=255)
                                                                                                                                   tGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGcc                                                                                                          <  1:365915/251‑1 (MQ=255)
                                                                                                                                                 cAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCttt                                                                                             >  1:90142/1‑251 (MQ=255)
                                                                                                                                                   gtttttgtttttCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTc                                                                                            >  1:887023/1‑250 (MQ=255)
                                                                                                                                                       ttgtttttCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCAc                                                                                                   <  1:659282/239‑1 (MQ=255)
                                                                                                                                                                          ttttGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTcac                                                                    <  1:729435/251‑1 (MQ=255)
                                                                                                                                                                          ttttGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTcac                                                                    <  1:226478/251‑1 (MQ=255)
                                                                                                                                                                            ttGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACAt                                                                  <  1:59230/251‑1 (MQ=255)
                                                                                                                                                                             tGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATa                                                                 <  1:20745/251‑1 (MQ=255)
                                                                                                                                                                                tctTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGc                                                              <  1:566822/251‑1 (MQ=255)
                                                                                                                                                                                 ctTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACaa                                                                                                                                            <  1:639336/172‑1 (MQ=255)
                                                                                                                                                                                 ctTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAAcc                                                                                                                                   <  1:24243/181‑1 (MQ=255)
                                                                                                                                                                                 ctTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCt                                                             <  1:74745/251‑1 (MQ=255)
                                                                                                                                                                                   ttACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCAcgg                                                                              >  1:577227/1‑232 (MQ=255)
                                                                                                                                                                                     aCGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACaa                                                                                                                                            >  1:215000/1‑168 (MQ=255)
                                                                                                                                                                                      cGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCTTGAat                                                        <  1:574/251‑1 (MQ=255)
                                                                                                                                                                                      cGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCTTGAat                                                        <  1:513153/251‑1 (MQ=255)
                                                                                                                                                                                        gAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCTTGAatat                                                      >  1:613146/1‑251 (MQ=255)
                                                                                                                                                                                         aaTGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCTTGAatat                                                      <  1:244279/250‑1 (MQ=255)
                                                                                                                                                                                           tGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCTTGAATAtctt                                                   <  1:271894/251‑1 (MQ=255)
                                                                                                                                                                                            gCTTCCAACTCGGTGATGTCCGCTTTATTGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCTTGAATAtctt                                                   >  1:457590/1‑250 (MQ=255)
                                                                                                                                                                                            gCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTcaca                                                                   <  1:347456/234‑1 (MQ=255)
                                                                                                                                                                                               tCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCTTGAATATCTTCttt                                               <  1:863887/251‑1 (MQ=255)
                                                                                                                                                                                                 cAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCTTGAATATCTTCTTTTa                                             >  1:483839/1‑251 (MQ=255)
                                                                                                                                                                                                   aCTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTAAAATCCACTTTCGGCCACGGTAACAAGcc                                                                                                                                         >  1:454325/1‑157 (MQ=255)
                                                                                                                                                                                                    cTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCAc                                                                                                                              >  1:302765/1‑167 (MQ=255)
                                                                                                                                                                                                        gTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCTTGAATATCTTCTTTTAAAATAc                                       <  1:524975/250‑1 (MQ=255)
                                                                                                                                                                                                        gTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCTTGAATATCTTCTTTTAAAATACg                                      >  1:413061/1‑251 (MQ=255)
                                                                                                                                                                                                           aTGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCTTGAATATCTTCTTTTAAAATACGAc                                    >  1:570418/1‑250 (MQ=255)
                                                                                                                                                                                                               ccGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCTTGAATATCTTCTTTTAAAATACGACCCTTa                               <  1:28934/251‑1 (MQ=255)
                                                                                                                                                                                                                    ttATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACaa                                                                                                                                            <  1:399747/137‑1 (MQ=255)
                                                                                                                                                                                                                    ttATCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCTTGAATATCTTCTTTTAAAATACGACCCTTACGAcc                          <  1:106883/251‑1 (MQ=255)
                                                                                                                                                                                                                      aTCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCTTGAat                                                        <  1:77869/219‑1 (MQ=255)
                                                                                                                                                                                                                      aTCGAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCTTGAATATCTTCTTTTAAAATACGACCCTTACGAcc                          <  1:473419/249‑1 (MQ=255)
                                                                                                                                                                                                                         gAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCTTGAatat                                                      >  1:50472/1‑218 (MQ=255)
                                                                                                                                                                                                                         gAAATGGGTAACATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCTTGAat                                                        <  1:629393/216‑1 (MQ=255)
                                                                                                                                                                                                                                    cATGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGc                                                                                                <  1:313540/165‑1 (MQ=255)
                                                                                                                                                                                                                                     aTGCGGAATCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCTTGAATATCTTCTTTTAAAATACGACCCTTACGACCTGTGCCTTTTACTTTAt         >  1:631809/1‑251 (MQ=255)
                                                                                                                                                                                                                                            aTCATGACCCAATTACGATGTAAATTCGCACCCGAAATCttgttg                                                                                                                                                                                                                >  1:461057/1‑45 (MQ=255)
                                                                                                                                                                                                                                            aTCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCTTGAATATCTTCTTTTAAAATACGACCCTTACGACCTGTGCCTTTTACTTTATCCAGGtt  <  1:771803/251‑1 (MQ=255)
                                                                                                                                                                                                                                            aTCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCTTGAATATCTTCTTTTAAAATACGACCCTTACGACCTGTGCCTTTTACTTTATCCAGGtt  <  1:760726/251‑1 (MQ=255)
                                                                                                                                                                                                                                            aTCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCTTGAATATCTTCTTTTAAAATACGACCCTTACGACCTGTGCCTTTTACTTTATCCAGGtt  >  1:371327/1‑251 (MQ=255)
                                                                                                                                                                                                                                            aTCATGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCTTGAATATCTTCTTTTAAAATACGACCCTTACGACCTGTGCCTTTTACTTTATCCAGGtt  <  1:521458/251‑1 (MQ=255)
                                                                                                                                                                                                                                                tGACCCAATTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCTTGAATATCTTCTTTTAAAATACGACCCTTACGAcc                          >  1:843077/1‑223 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                               
ATCTACCGCCACGCCCACATTGATGTATTTTTTCAGGATCAAACGTTGGGCATCTTCGGTAATGGAGCTGTTGAAACGCGGGAAGGCTTCCAACGCTTTGGCAACGGCTTTCATAATGAAGACCACAGGGGTGA‑TTTTCACGCCCAGTTTTTGTTTTTCAGACAAGGCGTTTTGCTCTTTACGGAATGCTTCCAACTCGGTGATGTCCGCTTTATCGAAATGGGTAACATGCGGAATCATGACCCAGTTACGATGTAAATTCGCACCCGAAATCTTGTTGATACGACTTAATTCCACTTCTTCGATTTCGCCGAATTTTCTGAAATCCACTTTCGGCCACGGTAACAAGCCTAAACCGGCACCATTCGCCGCGCCTGTTGCCGCAGCACCGCTTTCCAAAGCTTTCACGGCGGCTTTCACATAGGCTTGAATATCTTCTTTTAAAATACGACCCTTACGACCTGTGCCTTTTACTTTATCCAGGTT  >  1/1364569‑1365054

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑