| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 298,588 | T→C | intergenic (‑31228/+46017) | unknown ← / ← unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 298,588 | 0 | T | C | 100.0% | 225.2 / NA | 81 | intergenic (‑31228/+46017) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (46/35); total (46/35) | |||||||||||
ATCCAGCGCAACGGTGCGAGAAAAAGTCCTGAAAACCCGTGCCATTCAACTTCAGCGCGCCGGCAAAATTAATGCCCATTTAAATAGCAAAGAAATCGAACGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGTGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGTTTCGGCGGAATAACCTTTTCATTACGCCATAAACTGCCCATAGAGACCAACTGCACATCCGACGGC > 1/298344‑298827 | aTCCAGCGCAACGGTGCGAGAAAAAGTCCTGAAAACCCGTGCCATTCAACTTCAGCGCGCCGGCAAAATTAATGCCCATTTAAATAGCAAAGAAATCGAACGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCAt > 1:457884/1‑250 (MQ=255) cAGCGCAACGGTGCGAGAAAAAGTCCTGAAAACCCGTGCCATTCAACTTCAGCGCGCCGGCAAAATTAATGCCCATTTAAATAGCAAAGAAATCGAACGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTgg > 1:733378/1‑251 (MQ=255) ccTGAAAACCCGTGCCATTCAACTTCAGCGCGCCGGCAAAATTAATGCCCATTTAAATAGCAAAGAAATCGAACGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCaa > 1:87479/1‑251 (MQ=255) ccTGAAAACCCGTGCCATTCAACTTCAGCGCGCCGGCAAAATTAATGCCCATTTAAATAGCAAAGAAATCGAACGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCaa > 1:237310/1‑251 (MQ=255) aaaCCCGTGCCATTCAACTTCAGCGCGCCGGCAAAATTAATGCCCATTTAAATAGCAAAGAAATCGAACGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGTTTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGAc < 1:860705/251‑1 (MQ=255) aaaCCCGTGCCATTCAACTTCAGCGCGCCGGCAAAATTAATGCCCATTTAAATAGCAAAGAAATCGAACGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGAc < 1:578989/251‑1 (MQ=255) aaaCCCGTGCCATTCAACTTCAGCGCGCCGGCAAAATTAATGCCCATTTAAATAGCAAAGAAATCGAACGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGAc < 1:421450/251‑1 (MQ=255) aaCCCGTGCCATTCAACTTCAGCGCGCCGGCAAAATTAATGCCCATTTAAATAGCAAAGAAATCGAACGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACa > 1:727997/1‑251 (MQ=255) cccGTGCCATTCAACTTCAGCGCGCCGGCAAAATTAATGCCCATTTAAATAGCAAAGAAATCGAACGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAgg < 1:216659/251‑1 (MQ=255) aTTCAACTTCAGCGCGCCGGCAAAATTAATGCCCATTTAAATAGCAAAGAAATCGAACGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCa > 1:693765/1‑251 (MQ=255) ttCAACTTCAGCGCGCCGGCAAAATTAATGCCCATTTAAATAGCAAAGAAATCGAACGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCaa > 1:371896/1‑251 (MQ=255) aaCTTCAGCGCGCCGGCAAAATTAATGCCCATTTAAATAGCAAAGAAATCGAACGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCaaaaa < 1:795102/251‑1 (MQ=255) aCTTCAGCGCGCCGGCAAAATTAATGCCCATTTAAATAGCAAAGAAATCGAACGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAgg > 1:280432/1‑238 (MQ=255) aCTTCAGCGCGCCGGCAAAATTAATGCCCATTTAAATAGCAAAGAAATCGAACGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAAt > 1:187091/1‑251 (MQ=255) aTTAATGCCCATTTAAATAGCAAAGAAATCGAACGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTa > 1:881550/1‑251 (MQ=255) aTTAATGCCCATTTAAATAGCAAAGAAATCGAACGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTa > 1:601976/1‑251 (MQ=255) aaTGCCCATTTAAATAGCAAAGAAATCGAACGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATg < 1:623658/251‑1 (MQ=255) cATTTAAATAGCAAAGAAATCGAACGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGc < 1:292136/179‑1 (MQ=255) cATTTAAATAGCAAAGAAATCGAACGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGt > 1:604791/1‑192 (MQ=255) aTAGCAAAGAAATCGAACGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTaa < 1:281564/251‑1 (MQ=255) tAGCAAAGAAATCGAACGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAg < 1:314362/251‑1 (MQ=255) aaTCGAACGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCAcaccac < 1:662913/251‑1 (MQ=255) aaCGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGt < 1:67876/251‑1 (MQ=255) aaCGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGCACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAg < 1:434597/250‑1 (MQ=255) ggACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCAcaccac < 1:551971/242‑1 (MQ=255) ggACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAgg > 1:556684/1‑251 (MQ=255) aCTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAggg < 1:236919/250‑1 (MQ=255) aCTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAggg < 1:199525/250‑1 (MQ=255) tGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGcac < 1:275637/251‑1 (MQ=255) tGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGcac < 1:398036/251‑1 (MQ=255) aaaCTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATATTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACAtt < 1:434319/251‑1 (MQ=255) aaCCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGATGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCAt > 1:780161/1‑251 (MQ=255) aaCCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGc < 1:743681/232‑1 (MQ=255) ccGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGATTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACAttt > 1:423582/1‑245 (MQ=255) gTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGAc > 1:498658/1‑151 (MQ=255) gTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAg < 1:876170/216‑1 (MQ=255) gTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGt > 1:170513/1‑217 (MQ=255) gTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCg > 1:704336/1‑251 (MQ=255) gTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCg > 1:531315/1‑251 (MQ=255) gTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCg > 1:166229/1‑251 (MQ=255) gTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCg > 1:57664/1‑251 (MQ=255) tCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGt < 1:518310/251‑1 (MQ=255) gAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAggg < 1:114069/215‑1 (MQ=255) cccTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTc < 1:686545/250‑1 (MQ=255) cTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACt < 1:610841/251‑1 (MQ=255) gACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGAc > 1:841113/1‑133 (MQ=255) gACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTaa > 1:127587/1‑251 (MQ=255) ttCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACg > 1:209360/1‑251 (MQ=255) tCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACgg < 1:655406/251‑1 (MQ=255) ccGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGt > 1:34449/1‑251 (MQ=255) gTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGttt > 1:734673/1‑251 (MQ=255) gAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGTTTcgg > 1:542070/1‑250 (MQ=255) accGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGTTTCGGCGGAATAAc > 1:664265/1‑250 (MQ=255) aTACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGTTTCGGCGGAATAACCtttt > 1:650717/1‑250 (MQ=255) tACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGaa > 1:232611/1‑220 (MQ=255) cTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAggg > 1:324727/1‑164 (MQ=255) aaGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGTTTCGGCGGAATAACCTTTTCATTACg > 1:727152/1‑250 (MQ=255) aaGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGTTTCGGCGGAATAACCTTTTCATTACGc < 1:623542/251‑1 (MQ=255) gtCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGTTTCGGCGGAATAACCTTTTCATTACGCCATa > 1:275599/1‑251 (MQ=255) gtCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGTTTCGGCGGAATAACCTTTTCATTACGCCATa > 1:276284/1‑251 (MQ=255) gtCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGTTTCGGCGGAATAACCTTTTCATTACGCCATa > 1:754081/1‑251 (MQ=255) gtCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGTTTCGGCGGAATAACCTTTTCATTACGCCATa > 1:779934/1‑251 (MQ=255) gtCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAAGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGTTTCGGCGGAATAACCTTTTCATTACGCCATa > 1:428040/1‑251 (MQ=255) ccGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGTTTCGGCGGAATAACCTTTTCATTACGCCATAAAc < 1:562635/251‑1 (MQ=255) ccGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGTTTCGGCGGAATAACCTTTTCATTACGCCATAAAc < 1:839584/251‑1 (MQ=255) cACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGTTTCGGCGGAATAACCTTTTCATTACGCCATAAACTg > 1:686691/1‑250 (MQ=255) gATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAg < 1:366563/166‑1 (MQ=255) gATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGTTTCGGCGGAATAACCTTTTCATTACGCCATAAACTGCCCATAgaga > 1:393295/1‑250 (MQ=255) gATTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGTTTCGGCGGAATAACCTTTTCATTACGCCATAAACTGCCCATAgaga > 1:376800/1‑250 (MQ=255) aTTTAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGc < 1:806960/172‑1 (MQ=255) tAGATGGAGAACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGTTTCGGCGGAATAACCTTTTCATTACGCCATAAACTGCCCATAGAGACCAAc < 1:653026/251‑1 (MQ=255) gagaACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGTTTCGGCGGAATAACCTTTTCATTACGCCATAAACTGCCCATAGAGACCAACTGcac < 1:681441/250‑1 (MQ=255) gaACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGTTTCGGCGGAATAACCTTTTCATTACGCCATAAACTGCCCATAGAGACCAACTGCACAt > 1:189510/1‑250 (MQ=255) gaACAACACATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGTTTCGGCGGAATAACCTTTTCATTACGCCATAAACTGCCCATAGAGACCAACTGCACAt > 1:898430/1‑250 (MQ=255) caacaCATCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGTTTCGGCGGAATAACCTTTTCATTACGCCATAAACTGCCCATAGAGACCAACTGCACATCCGa > 1:13217/1‑251 (MQ=255) acaTCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGgt > 1:438693/1‑54 (MQ=255) acaTCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAgg > 1:534228/1‑136 (MQ=255) acaTCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGTTTCGGCGGAATAACCTTTTCATTACGCCATAAAc < 1:550231/219‑1 (MQ=255) acaTCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGTTTCGGCGGAATAACCTTTTCATTACGCCATAAACTGCCCATAGAGACCAACTGCACATCCGACgg > 1:450958/1‑250 (MQ=255) acaTCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGTTTCGGCGGAATAACCTTTTCATTACGCCATAAACTGCCCATAGAGACCAACTGCACATCCGACGGc < 1:896564/251‑1 (MQ=255) caTCAACCAGCGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATa < 1:285917/170‑1 (MQ=255) | ATCCAGCGCAACGGTGCGAGAAAAAGTCCTGAAAACCCGTGCCATTCAACTTCAGCGCGCCGGCAAAATTAATGCCCATTTAAATAGCAAAGAAATCGAACGGGACTGCAAACTAACCGACAAAGACGCACAGTTCCTGGAAAATGCCCTGACTAAACTGGGGCTTTCCGTACGAGCGTACCACCGCATACTGAAAGTGTCCCGCACCATTGCCGATTTAGATGGAGAACAACACATCAACCAGTGCCATCTGGCCGAAGCTCTGGGTTATCGGGCAATGGACAGGTTGTTGCAAAAATTGGCGAAAAACTCGGCGTAATGCGCAAAATTTTAAGGCACACCACGCAGTAAGGGCACATTTTCATAAGGTGGGACGGAAGTCGGTGCAGCGGCTTCACTAAATAAGAAAATAAACGGTTTCGGCGGAATAACCTTTTCATTACGCCATAAACTGCCCATAGAGACCAACTGCACATCCGACGGC > 1/298344‑298827 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |