Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,326,806 C→T intergenic (+167226/+94131) unknown → / ← unknown tRNA‑Val‑GAC/tRNA‑Met‑CAT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,326,8060CT100.0% 148.5 / NA 55intergenic (+167226/+94131)unknown/unknowntRNA‑Val‑GAC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (25/30);  total (25/30)

TTTATGGCGTAGGTGACGTTTACGTTTTGTTGCTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTCTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATAATGGCTTGGCGACCTTCCAATTTACCCGGTGCAGATTCCACCACGGCAATTTCGGCTAAATCATTTTTAACACGCTCTAACACGTCCAAACCGAT  >  1/1326560‑1327046
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                
tttATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGc                                                                                                                                                                                                                                               >  1:576091/1‑250 (MQ=255)
      gCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACTCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTa                                                                                                                                                                                                                                         >  1:6636/1‑250 (MQ=255)
                                         tCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAaataat                                                                                                                                                                                                     <  1:644013/251‑1 (MQ=255)
                                          cAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATc                                                                                                                                                                                                    <  1:885730/251‑1 (MQ=255)
                                             aaTATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATc                                                                                                                                                                                                              >  1:457288/1‑238 (MQ=255)
                                                   aCGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTAc                                                                                                                                                                                                                                        <  1:124158/206‑1 (MQ=255)
                                                   aCGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTc                                                                                                                                                                                                                                      <  1:711236/208‑1 (MQ=255)
                                                   aCGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATa                                                                                                                                                                                           >  1:264944/1‑251 (MQ=255)
                                                      tAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCt                                                                                                                                                                                                                                             >  1:322550/1‑198 (MQ=255)
                                                       aaGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAg                                                                                                                                                                                       >  1:17184/1‑251 (MQ=255)
                                                                 gTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATcac                                                                                                                                                                                                            <  1:129072/220‑1 (MQ=255)
                                                                      cGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATc                                                                                                                                                                                                    >  1:5253/1‑223 (MQ=255)
                                                                        cTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGc                                                                                                                                                                                                                    <  1:535744/205‑1 (MQ=255)
                                                                        cTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAaca                                                                                                                                                                       >  1:586063/1‑250 (MQ=255)
                                                                                                    aaaCGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACt                                                                                                                                          <  1:756178/251‑1 (MQ=255)
                                                                                                         cTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGaaa                                                                                                                                     >  1:321573/1‑251 (MQ=255)
                                                                                                           tAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTTTAATAACTCCGCAATGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGATAAACCGATTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATc                                                                                                                                                                                                                            <  1:726168/162‑1 (MQ=255)
                                                                                                           tAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATg                                                                                                                                   >  1:174136/1‑251 (MQ=255)
                                                                                                             gcagcaCCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATc                                                                                                                                                                                                    >  1:387600/1‑184 (MQ=255)
                                                                                                                   ccGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTc                                                                                                                                                                                                                                      <  1:818439/144‑1 (MQ=255)
                                                                                                                                            ttGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAg                                                                                                                                                                                       <  1:557093/166‑1 (MQ=255)
                                                                                                                                            ttGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCAGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCAt                                                                                                  >  1:438703/1‑251 (MQ=255)
                                                                                                                                              gTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTc                                                                                                                      <  1:629871/229‑1 (MQ=255)
                                                                                                                                              gTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATaa                                                                                                >  1:172658/1‑251 (MQ=255)
                                                                                                                                               tCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTa                                                                                                                                            <  1:671554/206‑1 (MQ=255)
                                                                                                                                                 taataaCTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATAATgg                                                                                             <  1:875858/251‑1 (MQ=255)
                                                                                                                                                  aataaCTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATAATGGc                                                                                            <  1:781341/251‑1 (MQ=255)
                                                                                                                                                      aCTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATAATGGCTTgg                                                                                        >  1:44337/1‑251 (MQ=255)
                                                                                                                                                                        cacTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATAATGGCTTGGCGACCTTCCAATTTAccc                                                                      <  1:146756/251‑1 (MQ=255)
                                                                                                                                                                            aaTCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATc                                                                                                                                                                                                                            >  1:212332/1‑97 (MQ=255)
                                                                                                                                                                            aaTCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGt                                                                                                                                              <  1:417496/175‑1 (MQ=255)
                                                                                                                                                                            aaTCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATAATGGCTTGGCGACCTTCCAATTTACCCGGTg                                                                  >  1:466427/1‑251 (MQ=255)
                                                                                                                                                                             aTCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATAATGGCTTGGCGACCTTCCAATTTACCCGGTGc                                                                 <  1:580133/251‑1 (MQ=255)
                                                                                                                                                                                 cGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTAc                                                                                                                                                                                                                                        >  1:791439/1‑80 (MQ=255)
                                                                                                                                                                                   ccTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATAAt                                                                                               <  1:566026/215‑1 (MQ=255)
                                                                                                                                                                                   ccTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATAATGGCTTGGCGACCTTCCAATTTACCCGGTGCAGAtt                                                            <  1:563063/250‑1 (MQ=255)
                                                                                                                                                                                         tCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATAATGGCTTGGCGACCTTCCAATTTAcc                                                                       <  1:481299/233‑1 (MQ=255)
                                                                                                                                                                                         tCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATAATGGCTTGGCGACCTTCCAATTTACCCGGTGCAGATTccacca                                                      >  1:197543/1‑250 (MQ=255)
                                                                                                                                                                                                aGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATAATGGCTTGGCGACCTTCCAATTTAccc                                                                      <  1:573373/227‑1 (MQ=255)
                                                                                                                                                                                                          acGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTc                                                                                                                                                                                                                                      <  1:367301/57‑1 (MQ=255)
                                                                                                                                                                                                          acGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATc                                                                                                                                                                                                    <  1:641801/91‑1 (MQ=255)
                                                                                                                                                                                                           cGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATAATGGCTTGGCGACCTTCCAATTTACCCGGTGCAGATTCCACCACGGCAATTTCGGCTAAAt                                    >  1:198733/1‑250 (MQ=255)
                                                                                                                                                                                                                  ccGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAAt                                                                                                                                    >  1:838387/1‑147 (MQ=255)
                                                                                                                                                                                                                  ccGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTc                                                                                                                      <  1:898912/161‑1 (MQ=255)
                                                                                                                                                                                                                  ccGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATAATGGCTTGGCGACCTTCCAAtt                                                                           <  1:279770/204‑1 (MQ=255)
                                                                                                                                                                                                                  ccGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATAATGGCTTGGCGACCTTCCAATTTACCCGGTGCAGATTCCACCACGTCAATTTCGGCTAAATCATTTTTa                            >  1:679248/1‑251 (MQ=255)
                                                                                                                                                                                                                               cAAATTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATAATGGCTTGGCGACCTTCCAATTTACCCGGTGCAGATTCCACCACGGCAATTTCGGCTAAATCATTTTTAACACGCTCTAac                <  1:241521/250‑1 (MQ=255)
                                                                                                                                                                                                                                aaaTTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATAATGGCTTGGCGACCTTCCAATTTACCCGGTGCAGATTCCACCACGGCAATTTCGGCTAAATCATTTTTAACACGCTCTAacac              <  1:570566/251‑1 (MQ=255)
                                                                                                                                                                                                                                aaaTTGCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATAATGGCTTGGCGACCTTCCAATTTACCCGGTGCAGATTCCACCACGGCAATTTCGGCTAAATCATTTTTAACACGCTCTAacac              <  1:140965/251‑1 (MQ=255)
                                                                                                                                                                                                                                     gCACTGTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATAATGGCTTGGCGACCTTCCAATTTACCCGGTGCAGATTCCACCACGGCAATTTCGGCTAAATCATTTTTAACACGCTCTAacac              <  1:302411/246‑1 (MQ=255)
                                                                                                                                                                                                                                          gTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATaa                                                                                                >  1:776582/1‑159 (MQ=255)
                                                                                                                                                                                                                                          gTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATAATGGCTTGGCGACCTTCCAATTTACCCGGTGCAGATTCCACCACGGCAATTTCGGCTAAATCATTTTTAACACGCTCTAacac              >  1:892474/1‑241 (MQ=255)
                                                                                                                                                                                                                                          gTCTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATAATGGCTTGGCGACCTTCCAATTTACCCGGTGCAGATTCCACCACGGCAATTTCGGCTAAATCATTTTTAACACGCTCTAACACGTCCAAACCg    >  1:590527/1‑251 (MQ=255)
                                                                                                                                                                                                                                            cTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATAATGGCTTGGCGACCTTCCAATTTAcc                                                                       <  1:877625/182‑1 (MQ=255)
                                                                                                                                                                                                                                            cTTCAGCGGTTTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATAATGGCTTGGCGACCTTCCAATTTACCCGGTGCAGATTCCACCACGGCAATTTCGGCTAAATCATTTTTAACACGCTCTAACACGTCCAAACCGat  >  1:512541/1‑251 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                
TTTATGGCGTAGGTGACGTTTACGTTTTGTTGCTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTCTGCCTTGTACTCACTTTAAATCTAAAAGGCTCTATCACAAATAATCAGGCGAATAAAAGTGCGGTTGAAAAAACACTTGGAATTTTCACCGCACTTTTGTTACTTGAAATGCACTGATTATTTCTTTTTCGGAGCAAGCACCATAATGGCTTGGCGACCTTCCAATTTACCCGGTGCAGATTCCACCACGGCAATTTCGGCTAAATCATTTTTAACACGCTCTAACACGTCCAAACCGAT  >  1/1326560‑1327046

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑