Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,326,592 C→T intergenic (+167012/+94345) unknown → / ← unknown tRNA‑Val‑GAC/tRNA‑Met‑CAT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,326,5920CT100.0% 193.8 / NA 72intergenic (+167012/+94345)unknown/unknowntRNA‑Val‑GAC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (39/33);  total (39/33)

CGCGATACACGCGTGAACGTGCACCATAATAACCTTTAGCAGCCTTAAGAATTTTCTTATGGCGTGCTCTTGCAATAACACCACGTTTTACACGAGCCATTATTTAATCTCCTATGTAATATTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGCTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTCTGCCTTGTA  >  1/1326350‑1326815
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                               
cgcgATACACGCGTGAACGTGCACCATAATAACCTTTAGCAGCCTTAAGAATTTTCTTATGGCGTGCTCTTGCAATAACACCACGTTTTACACGAGCCATTATTTAATCTCCTATGTAATATTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCt                                                                                                                                                                                                                            <  1:62163/248‑1 (MQ=255)
                                ccTTTAGCAGCCTTAAGAATTTTCTTATGGCGTGCTCTTGCAATAACACCACGTTTTACACGAGCCATTATTTAATCTCCTATGTAATATTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACg                                                                                                                                                                                          >  1:879442/1‑250 (MQ=255)
                                         gcCTTAAGAATTTTCTTATGGCGTGCTCTTGCAATAACACCACGTTTTACACGAGCCATTATTTAATCTCCTATGTAATATTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAacca                                                                                                                                                                                >  1:723638/1‑251 (MQ=255)
                                                     ttCTTATGGCGTGCTCTTGCAATAACACCACGTTTTACACGAGCCATTATTTAATCTCCTATGTAATATTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCt                                                                                                                                                                                        <  1:584016/231‑1 (MQ=255)
                                                            ggCGTGCTCTTGCAATAACACCACGTTTTACACGAGCCATTATTTAATCTCCTATGTAATATTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGa                                                                                                                                                             >  1:872293/1‑251 (MQ=255)
                                                                  ctctTGCAATAACACCACGTTTTACACGAGCCATTATTTAATCTCCTATGTAATATTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACg                                                                                                                                                         >  1:492946/1‑249 (MQ=255)
                                                                        cAATAACACCACGTTTTACACGAGCCATTATTTAATCTCCTATGTAATATTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTagca                                                                                                                                                  <  1:4629/250‑1 (MQ=255)
                                                                           aaaCACCACGTTTTACACGAGCCATTATTTAATCTCCTATGTAATATTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCAc                                                                                                                                              <  1:281312/250‑1 (MQ=255)
                                                                                    gTTTTACACGAGCCATTATTTAATCTCCTATGTAATATTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTg                                                                                                                                        >  1:106495/1‑248 (MQ=255)
                                                                                    gTTTTACACGAGCCATTATTTAATCTCCTATGTAATATTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTg                                                                                                                                        >  1:686094/1‑248 (MQ=255)
                                                                                    gTTTTACACGAGCCATTATTTAATCTCCTATGTAATATTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTg                                                                                                                                        >  1:670732/1‑248 (MQ=255)
                                                                                                     attTAATCTCCTATGTAATATTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTa                                                                                                                                                                                            <  1:408543/179‑1 (MQ=255)
                                                                                                     attTAATCTCCTATGTAATATTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGc                                                                                                                                                                        >  1:290566/1‑199 (MQ=255)
                                                                                                      tttAATCTCCTATGTAATATTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCAc                                                                                                                                              >  1:392911/1‑224 (MQ=255)
                                                                                                       ttAATCTCCTATGTAATATTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCAc                                                                                                                                              <  1:95388/223‑1 (MQ=255)
                                                                                                         aaTCTCCTATGTAATATTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCt                                                                                                                <  1:575917/251‑1 (MQ=255)
                                                                                                              ccTATGTAATATTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCtaataa                                                                                                           <  1:147226/251‑1 (MQ=255)
                                                                                                               cTATGTAATATTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAAc                                                                                                          <  1:236990/251‑1 (MQ=255)
                                                                                                                 aTGTAATATTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTg                                                                                                                   <  1:2218/240‑1 (MQ=255)
                                                                                                                 aTGTAATATTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACt                                                                                                         >  1:847096/1‑250 (MQ=255)
                                                                                                                 aTGTAATATTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACt                                                                                                         >  1:84928/1‑250 (MQ=255)
                                                                                                                 aTGTAATATTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTc                                                                                                        <  1:423449/251‑1 (MQ=255)
                                                                                                                      atatTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCAt                                                                                                   <  1:319639/251‑1 (MQ=255)
                                                                                                                        atTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTagcagc                                                                                                                                                <  1:364561/204‑1 (MQ=255)
                                                                                                                        atTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGc                                                                                                                       <  1:502812/229‑1 (MQ=255)
                                                                                                                        atTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCtaat                                                                                                             <  1:801161/239‑1 (MQ=255)
                                                                                                                                tAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAac                                                                                         <  1:399920/251‑1 (MQ=255)
                                                                                                                                         cTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTagc                                                                                                                                                   >  1:358707/1‑184 (MQ=255)
                                                                                                                                           gACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCtaataa                                                                                                           <  1:288176/222‑1 (MQ=255)
                                                                                                                                           gACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCtaat                                                                                                             <  1:387853/220‑1 (MQ=255)
                                                                                                                                           gACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTc                                                                                                        <  1:360008/225‑1 (MQ=255)
                                                                                                                                           gACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGCGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACg                                                                               >  1:327236/1‑250 (MQ=255)
                                                                                                                                             cgtacgtTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTg                                                                                                                                                                                                <  1:695687/135‑1 (MQ=255)
                                                                                                                                             cgtacgtTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCtaat                                                                                                             >  1:144051/1‑218 (MQ=255)
                                                                                                                                             cgtacgtTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGc                                                                              >  1:299400/1‑249 (MQ=255)
                                                                                                                                                 cgtTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTagcagc                                                                                                                                                >  1:162049/1‑179 (MQ=255)
                                                                                                                                                 cgtTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTAt                                                                        >  1:863051/1‑251 (MQ=255)
                                                                                                                                                   ttGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATc                                                                       <  1:200842/250‑1 (MQ=255)
                                                                                                                                                     gtgCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAAc                                                                                                          <  1:437155/213‑1 (MQ=255)
                                                                                                                                                     gtgCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAAc                                                                                                          <  1:557854/213‑1 (MQ=255)
                                                                                                                                                     gtgCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGcc                                                                             >  1:658437/1‑242 (MQ=255)
                                                                                                                                                       gCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAat                                                                                                                                                                                                                  >  1:390756/1‑107 (MQ=255)
                                                                                                                                                       gCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCt                                                                                                                                                                                        <  1:863797/133‑1 (MQ=255)
                                                                                                                                                        cTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTaaa                                                                 >  1:135429/1‑251 (MQ=255)
                                                                                                                                                          tATGCGTATGGCAAGCACGCGTCTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTCTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGc                                                               <  1:453193/251‑1 (MQ=255)
                                                                                                                                                          tATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCtaataa                                                                                                           >  1:661799/1‑207 (MQ=255)
                                                                                                                                                            tGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGAt                                                                                                                                                                                                  <  1:191075/118‑1 (MQ=255)
                                                                                                                                                            tGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGa                                                             >  1:745018/1‑251 (MQ=255)
                                                                                                                                                                 aTGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATtact                                                        <  1:91152/251‑1 (MQ=255)
                                                                                                                                                                         cACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTaa                                                 <  1:183334/250‑1 (MQ=255)
                                                                                                                                                                          aCGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAAc                                               <  1:479021/251‑1 (MQ=255)
                                                                                                                                                                             cgACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCg                                             >  1:494682/1‑250 (MQ=255)
                                                                                                                                                                                 tactaatactaaGTCGGACTTAGCAACCATAGCTTTATGGCGTAGGTTACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTCTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCa                                        >  1:741088/1‑251 (MQ=255)
                                                                                                                                                                                 tactaatactaaGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCa                                        >  1:286464/1‑251 (MQ=255)
                                                                                                                                                                                  actaatactaaGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCa                                        >  1:363800/1‑250 (MQ=255)
                                                                                                                                                                                  actaatactaaGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCAc                                       <  1:283263/251‑1 (MQ=255)
                                                                                                                                                                                   ctaatactaaGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAAc                                               >  1:598940/1‑242 (MQ=255)
                                                                                                                                                                                       tactaaGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATc                                                                       >  1:576362/1‑214 (MQ=255)
                                                                                                                                                                                           aaGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCt                                                                                                                                                                                        <  1:620665/97‑1 (MQ=255)
                                                                                                                                                                                           aaGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCAc                                                                                                                                              >  1:706493/1‑139 (MQ=255)
                                                                                                                                                                                                 gACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCa                          >  1:566149/1‑249 (MQ=255)
                                                                                                                                                                                                          aCCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAAc                                               >  1:434856/1‑219 (MQ=255)
                                                                                                                                                                                                          aCCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAg                >  1:570947/1‑250 (MQ=255)
                                                                                                                                                                                                           ccATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCtaataa                                                                                                           <  1:260882/158‑1 (MQ=255)
                                                                                                                                                                                                           ccATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCtaataa                                                                                                           >  1:538038/1‑158 (MQ=255)
                                                                                                                                                                                                            cATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCgg             <  1:838083/251‑1 (MQ=255)
                                                                                                                                                                                                                gATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCAc                                                                                                                                              >  1:796274/1‑118 (MQ=255)
                                                                                                                                                                                                                gATTTATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTACCACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGtttg         >  1:438051/1‑248 (MQ=255)
                                                                                                                                                                                                                  tttATGGCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGc        >  1:576091/1‑250 (MQ=255)
                                                                                                                                                                                                                        gCGTAGGTGACGTTTACGTTTTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACTCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTTTGCCTTGTa  >  1:6636/1‑250 (MQ=255)
                                                                                                                                                                                                                                  cgtttacgtttTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATtac                                                         >  1:815849/1‑185 (MQ=255)
                                                                                                                                                                                                                                         gtttTGTTGTTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAac                                                                                         >  1:116403/1‑146 (MQ=255)
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                               
CGCGATACACGCGTGAACGTGCACCATAATAACCTTTAGCAGCCTTAAGAATTTTCTTATGGCGTGCTCTTGCAATAACACCACGTTTTACACGAGCCATTATTTAATCTCCTATGTAATATTTTAACTAAAATGAACTGACGTACGTTGTGCTTATGCGTATGGCAAGCACGCGACTACTAATACTAAGTCGGACTTAGCAACCATAGATTTATGGCGTAGGTGACGTTTACGTTTTGTTGCTTTCTTAGTCAAAATATGACGTAAGTGAGATTGTTTACGCTTGAAACCACCGGAAGCAGTTTTTTTGAAACGCTTAGCAGCACCGCGTGCTGTTTTAATTTTAGGCATTGTCTAATAACTCCGCATTGTTTTTAACACTAATCACGCCTTTATCTTTAAAGCGATTACTACGTTAAACCGCTTCACCGTGCAAATTGCACTGTCTTCAGCGGTCTGCCTTGTA  >  1/1326350‑1326815

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑