| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,307,035 | T→G | intergenic (+147455/+113902) | unknown → / ← unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,307,035 | 0 | T | G | 100.0% | 91.8 / NA | 34 | intergenic (+147455/+113902) | unknown/unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (14/20); total (14/20) | |||||||||||
TTTCCCCGTTCACCTTCGCCTCCAAAGTGCGGTAGGTTTTCGGCGAGAATTGCAAATCATAGCCGTTACCCGTTTTATTAAAATAAGGTGCCTCCGCCAACGGATCCTGCGCCTGCGGCGGATTCGCCCACACCGTTCCTGAAATCACCAACCCCACCAAAGAAGCCAACCATGTTTTTGTGTGCATAAGATTTTCCTGTTTAAAAGATATACTGTTGATTAGATGAGCGTATCGTCTATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAACATCAAGTCAATATCACTTGAAAATGTAACTCGTTTTACTAAAATTTACGTATTATTTTCATTTTATGGATGTAAAACACCGAACAAAATGAGAAAAAGGAATAAACTAGGGAGAATGTTGAATCAAGCGGGAATAAGTGGAACAAAACCAATGAAAACAAGGGCG > 1/1306798‑1307265 | cacggaatttcacggtttccccgttcaccttcgcctccaaagtgcggtaggttttcggcgagaattgcaaatcatagccgttacccgttttattaaaataaggtgcctGCGCCTGCGGCGGATTCGCCCACACCGTTCCTGAAATCACCAACCCCACCAAAGAAGCCAACCATGTTTTTGTGTGCATAAGATTTTCCTGTTTAAAAGATATACTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGt < 1:283347‑M2/141‑1 (MQ=255) gtttccccgttcaccttcgcctccaaagtgcggtaggttttcggcgagaattgcaaatcatagccgttacccgttttattaaaataaggtgcctGCGCCTGCGGCGGATTCGCCCACACCGTTCCTGAAATCACCAACCCCACCAAAGAAGCCAACCATGTTTTTGTGTGCATAAGATTTTCCTGTTTAAAAGATATACTGTTGATTAGATGAGCGTATCGTCGATGAGtt > 1:758760‑M2/95‑231 (MQ=255) ttccccgttcaccttcgcctccaaagtgcggtaggttttcggcgagaattgcaaatcatagccgttacccgttttattaaaataaggtgcctGCGCCTGCGGCGGATTCGCCCACACCGTTCCTGAAATCACCAACCCCACCAAAGAAGCCAACCATGTTTTTGTGTGCATAAGATTTTCCTGTTTAAAAGATATACTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTg < 1:168986‑M2/159‑1 (MQ=255) accttcgcctccaaagtgcggtaggttttcggcgagaattgcaaatcatagccgttacccgttttattaaaataaggtgcctGCGCCTGCGGCGGATTCGCCCACACCGTTCCTGAAATCACCAACCCCACCAAAGAAGCCAACCATGTTTTTGTGTGCATAAGATTTTCCTGTTTAAAAGATATACTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACaa < 1:124049‑M2/152‑1 (MQ=255) ttcgcctccaaagtgcggtaggttttcggcgagaattgcaaatcatagccgttacccgttttattaaaataaggtgcctGCGCCTGCGGCGGATTCGCCCACACCGTTCCTGAAATCACCAACCCCACCAAAGAAGCCAACCATGTTTTTGTGTGCATAAGATTTTCCTGTTTAAAAGATATACTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCa > 1:722309‑M2/80‑251 (MQ=255) tgcaaatcatagccgttacccgttttattaaaataaggtgcctGCGCCTGCGGCGGATTCGCCCACACCGTTCCTGAAATCACCAACCCCACCAAAGAAGCCAACCATGTTTTTGTGTGCATAAGATTTTCCTGTTTAAAAGATATACTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAACATCAAGTCAatat < 1:533493‑M2/208‑1 (MQ=255) tgcaaatcatagccgttacccgttttattaaaataaggtgcctGCGCCTGCGGCGGATTCGCCCACACCGTTCCTGAAATCACCAACCCCACCAAAGAAGCCAACCATGTTTTTGTGTGCATAAGATTTTCCTGTTTAAAAGATATACTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAACATCAAGTCAatat < 1:48318‑M2/208‑1 (MQ=255) tgcaaatcatagccgttacccgttttattaaaataaggtgcctGCGCCTGCGGCGGATTCGCCCACACCGTTCCTGAAATCACCAACCCCACCAAAGAAGCCAACCATGTTTTTGTGTGCATAAGATTTTCCTGTTTAAAAGATATACTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAACATCAAGTCAatat < 1:405638‑M2/208‑1 (MQ=255) caaatcatagccgttacccgttttattaaaataaggtgcctGCGCCTGCGGCGGATTCGCCCACACCGTTCCTGAAATCACCAACCCCACCAAAGAAGCCAACCATGTTTTTGTGTGCATAAGATTTTCCTGTTTAAAAGATATACTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAACATCAAGTCAATATc < 1:568517‑M2/209‑1 (MQ=255) tcatagccgttacccgttttattaaaataaggtgcctGCGCCTGCGGCGGATTCGCCCACACCGTTCCTGAAATCACCAACCCCACCAAAGAAGCCAACCATGTTTTTGTGTGCATAAGATTTTCCTGTTTAAAAGATATACTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAACATCAAGTCAatat < 1:335341‑M2/208‑1 (MQ=255) tcatagccgttacccgttttattaaaataaggtgcctGCGCCTGCGGCGGATTCGCCCACACCGTTCCTGAAATCACCAACCCCACCAAAGAAGCCAACCATGTTTTTGTGTGCATAAGATTTTCCTGTTTAAAAGATATACTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAACATCAAGTCAatat < 1:688096‑M2/208‑1 (MQ=255) ataaggtgcctGCGCCTGCGGCGGATTCGCCCACACCGTTCCTGAAATCACCAACCCCACCAAAGAAGCCAACCATGTTTTTGTGTGCATAAGATTTTCCTGTTTAAAAGATATACTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAACATCAAGTCAATATCACTTGAAAATGTAACt < 1:352115‑M2/225‑1 (MQ=255) taaggtgcctGCGCCTGCGGCGGATTCGCCCACACCGTTCCTGAAATCACCAACCCCACCAAAGAAGCCAACCATGTTTTTGTGTGCATAAGATTTTCCTGTTTAAAAGATATACTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAAc < 1:235887‑M2/195‑1 (MQ=255) acacCGTTCCTGAAATCACCAACCCCACCAAAGAAGCCAACCATGTTTTTGTGTGCATAAGATTTTCCTGTTTAAAAGATATACTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAACATCAAGTCAATATCACTTGAAAATGTAACTCGTTTTACTAAAATTTACATATTATTTTCATTTTATGGATGTAAAac < 1:147877/251‑1 (MQ=255) ccaccaAAGAAGCCAACCATGTTTTTGTGTGCATAAGATTTTCCTGTTTAAAAGATATACTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAACATCAAGTCAatat < 1:827749/163‑1 (MQ=255) ccATGTTTTTGTGTGCATAAGATTTTCCTGTTTAAAAGATATACTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAACATCAAGTCAatat > 1:112045/1‑147 (MQ=255) ccATGTTTTTGTGTGCATAAGATTTTCCTGTTTAAAAGATATACTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAACATCAAGTCAATATCACTTGAAAATGTAACTCGTTTTACTAAAATTTACATATTATTTTCATTTTATGGATGTAAAACACCGAACa > 1:764738/1‑219 (MQ=255) gtgtgCATAAGATTTTCCTGTTTAAAAGATATACTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACaaaa < 1:700908/83‑1 (MQ=255) gtgCATAAGATTTTCCTGTTTAAAAGATATACTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAg > 1:405246/1‑70 (MQ=255) gCATAAGATTTTCCTGTTTAAAAGATATACTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAACATCAAGTCAATATCACTTGAAAATGTaa > 1:234226/1‑148 (MQ=255) ccTGTTTAAAAGATATACTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAACATCAAGTCAATATCACTTGAAAATGTAACTCGTTTTACTAAAATTTACATATTATTTTCATTTTATGGATGTAAAACACCGAACAAAATGAGAAAAAGGAATAAACTAGGGAGAATGTTGAATCAAGCGGGAATAAGTGGAAc < 1:664625/251‑1 (MQ=255) aaGATATACTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAACATCAAGTCAATATCACTTGAAAATGTAACTCGTTTTACTAAAATTTACATATTATTTTCATTTTATGGATGTAAAACACCGAACAAAATGAGAAAAAGGAATAAACTAGGGAGAATGTTGAATCAAGCGGGAATAAGTGGAACAAAAcc > 1:768109/1‑248 (MQ=255) aaGATATACTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAACATCAAGTCAATATCACTTGAAAATGTAACTCGTTTTACTAAAATTTACATATTATTTTCATTTTATGGATGTAAAACACCGAACAAAATGAGAAAAAGGAATAAACTAGGGAGAATGTTGAATCAAGCGGGAATAAGTGGAACAAAACCAAt > 1:730142/1‑251 (MQ=255) aaGATATACTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAACATCAAGTCAATATCACTTGAAAATGTAACTCGTTTTACTAAAATTTACATATTATTTTCATTTTATGGATGTAAAACACCGAACAAAATGAGAAAAAGGAATAAACTAGGGAGAATGTTGAATCAAGCGGGAATAAGTGGAACAAAACCAAt > 1:809627/1‑251 (MQ=255) gATATACTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACaa < 1:515466/54‑1 (MQ=255) taCTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCACACTTAAAAATCATATAAACATCAAGTCAATATCACTTGAAAATGTAACTCGTTTTACTAAAATTTTCATATTATTTTCATTTTATGGATGTAAAACACCGAGCAAAATGAGAAAAAGGAATAAACTAGGGAGAATGTTGAATCAAGCGGGAATAAGTGGAACAAAACCAATGAAAAc < 1:832206/251‑1 (MQ=255) cTGTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAACATCAAGTCAATATCACTTGAAAATGTAACTCGTTTTACTAAAATTTACATATTATTTTCATTTTATGGATGTAAAACACCGAACAAAATGAGAAAAAGGAATAAACTAGGGAGAATGTTGAATCAAGCGGGAATAAGTGGAACAAAAcc < 1:312579/240‑1 (MQ=255) gTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCAc > 1:62965/1‑72 (MQ=255) gTTGATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAACATCAAGTCAATATCACTTGAAAATGTAACTCGTTTTACTAAAATTTACATATTATTTTCATTTTATGGATGTAAAACACCGAACAAAATGAGAAAAAGGAATAAACTAGGGAGAAt > 1:900721/1‑205 (MQ=255) gATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAACATCAAGTCAATATCACTTGAAAATGTAACTCGTTTTACTAAAATTTACATATTATTTTCATTTTATGGATGTAAAac < 1:707265/163‑1 (MQ=255) gATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAACATCAAGTCAATATCACTTGAAAATGTAACTCGTTTTACTAAAATTTACATATTATTTTCATTTTATGGATGTAAAACACCGAACAAAATGAGAAAAAGGAATAAACTAGGGAGAATGTTGAAt < 1:139164/209‑1 (MQ=255) gATTAGATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAACATCAAGTCAATATCACTTGAAAATGTAACTCGTTTTACTAAAATTTACATATTATTTTCATTTTATGGATGTAAAACACCGAACAAAATGAGAAAAAGGAATAAACTAGGGAGAATGTTGAATCAAGCGGGAATAAGTGGAACAAAACCAATGAAAACAAGGgcg > 1:641532/1‑251 (MQ=255) gATGAGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAAc > 1:474431/1‑81 (MQ=255) aGCGTATCGTCGATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAACATCAAGTCAATATCACTTGAAAATGTAACTCGTTTTACTAAAATTTACATATTATTTTCATTTTATGGATGTAAAACACCGAACAAAATGAGAAAAAGGAATAAACTAggg > 1:715202/1‑188 (MQ=255) | TTTCCCCGTTCACCTTCGCCTCCAAAGTGCGGTAGGTTTTCGGCGAGAATTGCAAATCATAGCCGTTACCCGTTTTATTAAAATAAGGTGCCTCCGCCAACGGATCCTGCGCCTGCGGCGGATTCGCCCACACCGTTCCTGAAATCACCAACCCCACCAAAGAAGCCAACCATGTTTTTGTGTGCATAAGATTTTCCTGTTTAAAAGATATACTGTTGATTAGATGAGCGTATCGTCTATGAGTTCGGTAGGTGTAACAAAAAAGTGCGGTTGATTTTCACCGCACTTAAAAATCATATAAACATCAAGTCAATATCACTTGAAAATGTAACTCGTTTTACTAAAATTTACGTATTATTTTCATTTTATGGATGTAAAACACCGAACAAAATGAGAAAAAGGAATAAACTAGGGAGAATGTTGAATCAAGCGGGAATAAGTGGAACAAAACCAATGAAAACAAGGGCG > 1/1306798‑1307265 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |