| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,306,632 | T→C | intergenic (+147052/+114305) | unknown → / ← unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,306,632 | 0 | T | C | 100.0% | 158.3 / NA | 58 | intergenic (+147052/+114305) | unknown/unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (26/32); total (26/32) | |||||||||||
CGTGCTCCAAATTGGTAATCGGACAATAGGCAGAAACCGCAAAAATTGCATCACTCGCTTCTGCCGCGCCCGCGTGTTTTAAATAATGGGCATAATCCGGATTATCGCCGCTCGCCCCTAACAAGGCGGACAACGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCTGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATCCGGTTCAAGCGGCTGCTGCACATACACAATCTTCTCAAAAGCACGGAATTTCACGGTTTCCCCGTTCACCTTCGCCTCCAAAGTGCGGTAGGTTTTCGGCGAGAATTGCAAATCATAGCCG > 1/1306388‑1306862 | cGTGCCCCAATTTGGTAATCGGACAATAGGCAAAAACCGCAAAAATTGCATCACTCGCTTCTGCCCCGCCCGCGTGTTTTAAATAATGGCCAAAACCCGTATTATCGCCGCTCGCCCCTAAAAAGGCGAACACCGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGgcgc < 1:612407/250‑1 (MQ=255) cTCCAAATTGGTAATCGGACAATAGGCAGAAACCGCAAAAATTGCATCACTCGCTTCTGCCGCGCCCGCGTGTTTTAAATAATGGGCATAATCCGGATTATCGCCGCTCGCCCCTAACAAGGCGGACAACGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTg > 1:711058/1‑250 (MQ=255) ggaaatcgaaaaatgggCAGAACCCGCAAAAATGGCATCACTCGCTTCTGCCGCGCCGGCGTGTTTAAAATAATGGGCATAACCCGGATTATCGCCGCTCGCCCCAAACAAGGCGGACACCGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTatat < 1:657216/235‑1 (MQ=255) ggaaaccgaaaaaagggCAAAAACCGCAAAAATGGCATCACTCGCTTCGGCCGCGCCCGCGTGTTTTAAATAAGGGGCATAACCCGGATTATCGCCGCTCGCCCCTAACAAGGCGGACAACGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTatat < 1:357828/235‑1 (MQ=255) ggTAATCGGACAATAGGCAGAAACCGCAAAAATTGCATCACTCGCTTCTGCCGCGCCCGCGTGTTTTAAATAATGGGCATAATCCGGATTATCGCCGCTCGCCCCTAACAAGGCGGACAACGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATAtt > 1:477830/1‑251 (MQ=255) ggCAGAAACCGCAAAAATTGCATCACTCGCTTCTGCCGCGCCCGCGTGTTTTAAATAATGGGCATAATCCGGATTATCGCCGCTCGCCCCTAACAAGGCGGACAACGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGt > 1:503591/1‑242 (MQ=255) cAGAAACCGCAAAAATTGCATCCCTCGCTTCTGCCGCGCCCTCGTTTTTTAAATAATGGGCATAATCCGGATTATCGCCGCTCGCCCCTAACAGGGCGGACACCGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAg < 1:500675/250‑1 (MQ=255) cctcccTTCTGCCGCGCCCGCGTGTTTTAAATAAGGGGCATAATCCGGATTACCGCCGCTCGCCCCTAACAAGGCGGACAACGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCacac < 1:86724/246‑1 (MQ=255) cctcccTTCTGCCCCGCCCGCGTGTTTAAAATAAGGGGAATAATCCGAATTACCCCCCCCCCCCCCAAAAAAGGCGGACAACGCCCCGCCGGCCCTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCacac < 1:745694/246‑1 (MQ=255) cTTCTGCCGCGCCCGCGTGTTTTAAATAATGGGCATAATCCGGATTATCGCCGCTCGCCCCTAACAAGGCGGACAACGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGc > 1:17817/1‑250 (MQ=255) cTGCCGCGCCCGCGTGTTTTAAATAAGGGGCATAACCCGGATTACCGCCGCTCGCCCCTAACAAGGCGGACAACGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAg < 1:324645/220‑1 (MQ=255) ccGCGCCCGCGTTTTTTAAATAAGGGGCATAATCCGGTTTATCGCCGCTCGCCCCTAACAAGGCGGACAACGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCcaccac < 1:89445/250‑1 (MQ=255) cccGCGTTTTTAAAATAAGGGCCATAATCCGGTTCATCGCCCCCCGCCCCAAAAAGGGCGGACACCCCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGcc < 1:273975/251‑1 (MQ=255) ttttttAAATAATGGGCATAATCCGGATTATCGCCGCTCGCCCCTAACAAGGCGGACAACGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGa < 1:105569/249‑1 (MQ=255) tttttaaaaTAAGGGGCATAACCCGGTTTATCGCCGCCCGCCCCTAACAGGGCGGACAACGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGa < 1:475843/245‑1 (MQ=255) ttttaaaaaaaggggCATAACCCGGATTACCGCCCCTCGCCCCTAACAAGGCGGACAACGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGaa < 1:495833/239‑1 (MQ=255) gtTTTAAATAATGGGCATAATCCGGATTATCGCCGCTCGCCCCTAACAAGGAGGACAACGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGaa > 1:250784/1‑251 (MQ=255) ttttAAATAATGGGCATAACCCGGATTATCGCCGCTCGCCCCTAACAAGGCGGACACCGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGaa < 1:480438/250‑1 (MQ=255) aaaTAATGGGCATAATCCGGATTATCGCCGCTCGCCCCTAACAAGGCGGACAACGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTg > 1:669730/1‑250 (MQ=255) ggCATAATCCGGATTATCGCCGCTCGCCCCTAACAAGGCGGACAACGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCcaccac > 1:643240/1‑225 (MQ=255) ggCATAATCCGGATTATCGCCGCTCGCCCCTAACAAGGCGGACAACGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGaa > 1:330942/1‑238 (MQ=255) ccATAATCCGGATTATCGCCGCTCGCCCCTAACAAGGCGGACACCGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATc < 1:599991/250‑1 (MQ=255) aaTAACCCGGTTTATCGCCGCTCGCCCCTAACAGGGCGGACACCGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATc < 1:51792/249‑1 (MQ=255) acccGGATTACCGCCGCTCGCCCCTAACAAGGCGGACACCGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGaa < 1:496267/230‑1 (MQ=255) aTCGCCGCTCGCCCCTAACAAGGCGGACACCGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCa < 1:247215/233‑1 (MQ=255) aTCGCCGCTCGCCCCTAACAAGGCGGACAACGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAAt > 1:817979/1‑250 (MQ=255) cGCCCCTAACAAGGCGGACAACGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATCCGGTTCAAg > 1:678214/1‑251 (MQ=255) ccccTAACAAGGCGGCCAACGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATCCGGTTCAAGCg > 1:516288/1‑251 (MQ=255) ccccTAACAAGGCGGACAACGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATACTCGCCGCCGGCGCCTTGCCGGCATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATCCGGTTCAAGCg > 1:69925/1‑251 (MQ=255) caccGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATACCGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATCCGGTTCAAGCGGCTGCTGCACATacac < 1:368287/248‑1 (MQ=255) aCGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATCCGGTTCAAGCGGCTGCTGCACATACACaa < 1:27025/251‑1 (MQ=255) cccccGCCGGCACTGGTGCCATTAAAAATAATTTTATTGGCATCGCCCGGCATCCCCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATCCGGTTCAAGCGGCTGCTGCACATACACAAtc < 1:783148/250‑1 (MQ=255) ccgccgGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTcc > 1:663792/1‑141 (MQ=255) cgccgGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGccacc > 1:802029/1‑173 (MQ=255) cgccgGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGaa < 1:539841/188‑1 (MQ=255) gccgGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATc > 1:863257/1‑215 (MQ=255) ccgGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATCCGGTTCAAGCGGCTGCTGCACATACACAATCTTCTCa < 1:320743/251‑1 (MQ=255) cACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATCCGGTTCAAGCGGCTGCTGCACATACACAATCTTCTCAAAAg < 1:689097/251‑1 (MQ=255) ggTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATCCGGTTCAAGCGGCTGCTGCACATACACAATCTTCTCAAAAGCACg > 1:202177/1‑251 (MQ=255) aGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATCCGGTTCAAGCGGCTGCTGCACATACACAATCTTCTCAAAAGCACGGAATTTCa > 1:515841/1‑250 (MQ=255) tATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGaa < 1:160925/158‑1 (MQ=255) tATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATCCGGTTCAAGCGGCTGCTGCACATACACAAtcttc > 1:626656/1‑220 (MQ=255) ggCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATCCGGTTCAAGCGGCTGCTGCACATACACAAtc > 1:663839/1‑203 (MQ=255) ggCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATCCGGTTCAAGCGGCTGCTGCACATACACAATCTTCTCa < 1:535033/209‑1 (MQ=255) ggCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATCCGGTTCAAGCGGCTGCTGCACATACACAATCTTCTCAAAAGCACGGAATTTCACGGTTTCCCCGTTCACCTTCGCCTc > 1:36581/1‑250 (MQ=255) gCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATCCGGTTCAAGCGGCTGCTGCACATACACAATCTTCTCAAAAGCACGGAATTTCACGGTTTccc < 1:238761/233‑1 (MQ=255) gCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATCCGGTTCAAGCGGCTGCTGCACATACACAATCTTCTCAAAAGCACGGAATTTCACGGTTTCCCCGTTCACCTTCGCCTCCa > 1:694325/1‑251 (MQ=255) cATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGcc > 1:361363/1‑124 (MQ=255) ccTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATCCGGTTCAAGCGGCTGCTGCACAt < 1:666767/188‑1 (MQ=255) ccTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATCCGGTTCAAGCGGCTGCTGCACATACACAATCTTATCa < 1:678143/202‑1 (MQ=255) catcatTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGcc < 1:448280/59‑1 (MQ=255) catcatTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATCCGGTTCAAGCGGCTGCTGCACATACACAATCTTCTCaaa < 1:330303/201‑1 (MQ=255) tcatTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATGGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATCCGGTTCAAGCGGCTGCTGCACATACACAAtc < 1:539965/191‑1 (MQ=255) aTGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATCCGGTTCAAGCGGCTGCTGCACATACACAATCTTCTCAAAAGCACGGAATTTCACGGTTTccc > 1:685521/1‑214 (MQ=255) aaaTAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATCCGGTTCAAGCGGCTGCTGCACGTACACAATCTTCTCAAAAGCACGGAATTTCACGGTTTCCCCGTTCACCTTCGCCTCCAAAGTGCGGTAGGTTTTCGGCgag > 1:443476/1‑251 (MQ=255) tAACGCACCGCCGATTTCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGcc > 1:782512/1‑110 (MQ=255) ttCAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATCCGGTTCAAGCGGCTGCTGCACATACACAATCTTCTCAAAAGCACGGAATTTCACGGTTTCCCCGTTCACCTTCGCCTCCAAAGTGCGGTAGGTTTTCGGCGAGAATTGCAAATCATAGCCg < 1:191643/251‑1 (MQ=255) cAAATCGATAATCGCCGCCGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGcc > 1:103872/1‑82 (MQ=255) | CGTGCTCCAAATTGGTAATCGGACAATAGGCAGAAACCGCAAAAATTGCATCACTCGCTTCTGCCGCGCCCGCGTGTTTTAAATAATGGGCATAATCCGGATTATCGCCGCTCGCCCCTAACAAGGCGGACAACGCCCCGCCGGCACTGGTGCCATTAGAAATAATTTTATTGGCATCGCCCGGCATCACCTCATCATTAAAATGCAAATAACGCACCGCCGATTTCAAATCGATAATCGCCGCTGGCGCCTTGCCGGTATATTTTCCGTCTTTCTCCAGCGTCCGCCCGCGTGCGCCCACACTCGCCACCACATAGCCTTTAGAAAGTGCGGTCAAATCAGCGTTTGATAATCCGGTTCAAGCGGCTGCTGCACATACACAATCTTCTCAAAAGCACGGAATTTCACGGTTTCCCCGTTCACCTTCGCCTCCAAAGTGCGGTAGGTTTTCGGCGAGAATTGCAAATCATAGCCG > 1/1306388‑1306862 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |