Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,305,436 C→T intergenic (+145856/+115501) unknown → / ← unknown tRNA‑Val‑GAC/tRNA‑Met‑CAT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,305,4360CT100.0% 181.6 / NA 65intergenic (+145856/+115501)unknown/unknowntRNA‑Val‑GAC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (30/35);  total (30/35)

TCCGAATTACGTGAATGGTTAACCGCTGCAAATACCGAAAAAAATTCCCAACTCTCTATTTTACAAGCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGT‑CCCCCTAAGTTATAGGGTGATTATTTTTCAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCGACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTAGTGAGTGCCGATGCTTTATGTAAAACACCACCGCACTTTTACCATTCCCGTAAACTATTTGCTAATACTATCCACCCACTGAAACAACTCATCCAAATCATAATCCCCCGCATG  >  1/1305193‑1305665
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                     
tCCGAATTACGTGAATGGTTAACCGCTGCAAATACCGAAAAAAATTCCCAACTCTCTATTTTACAAGCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGGGAAACAACCCCGCCTTTGTGTTTTGCATACAACGGTGCTTTATGAAAAATGCCGTTTTTGGTTTTTTA‑TGTCCCCCCTAAGTTATAGGGGGATTATTTTTTAacca                                                                                                                                                                                                                                  >  1:663718/1‑250 (MQ=255)
  cGAATTACGTGAATGGTTAACCGCTGCAAATACCGAAAAAAATTCCCAACTCTCTATTTTACAAGCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGGTTTTATTCCGTAAAAAAATAAAGTGAAAAAACCGCGCTTATGTGTTTTGCATATAACGGGGCTTTATGAAAAATGCCGTTTTTGCTTTTATATTTT‑CCCCCCCAGTTATAGGGCGATTATTTTTTAaccacc                                                                                                                                                                                                                                >  1:373112/1‑250 (MQ=255)
        aCGTGAATGGTTAACCGCTGCAAATACCGAAAAAAATTCCCAACTCTCTATTTTACAAGCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGt                                                                                                                                                                                                                         <  1:519149/251‑1 (MQ=255)
        aCGTGAATGGTTAACCGCTGCAAATACCGAAAAAAATTCCCAACTCTCTATTTTACAAGCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGt                                                                                                                                                                                                                         <  1:637152/251‑1 (MQ=255)
        aCGTGAATGGTTAACCGCTGCAAATACCGAAAAAAATTCCCAACTCTCTATTTTACAAGCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGt                                                                                                                                                                                                                         <  1:822429/251‑1 (MQ=255)
               tGGTTAACCGCTGCAAATACCGAAAAAAATTCCCAACTCTCTATTTTACAAGCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACAt                                                                                                                                                                                                                  <  1:653941/251‑1 (MQ=255)
               tGGTTAACCGCTGCAAATACCGAAAAAAATTCCCAACTCTCTATTTTACAAGCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACAt                                                                                                                                                                                                                  <  1:258241/251‑1 (MQ=255)
               tGGTTAACCGCTGCAAATACCGAAAAAAATTCCCAACTCTCTATTTTACAAGCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACAt                                                                                                                                                                                                                  <  1:196035/251‑1 (MQ=255)
               tGGTTAACCGCTGCAAATACCGAAAAAAATTCCCAACTCTCTATTTTACAAGCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACAt                                                                                                                                                                                                                  <  1:881628/251‑1 (MQ=255)
                 gTTAACCGCTGCAAATACCGAAAAAAATTCCCAACTCTCTATTTTACAAGCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACAtt                                                                                                                                                                                                                 <  1:343099/250‑1 (MQ=255)
                      ccGCTGCAAATACCGAAAAAAATTCCCAACTCTCTATTTTACAAGCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTAc                                                                                                                                                                                                                    <  1:829818/242‑1 (MQ=255)
                       cGCTGCAAATACCGAAAAAAATTCCCAACTCTCTATTTTACAAGCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTAttt                                                                                                                                                                                                          <  1:357647/251‑1 (MQ=255)
                        gCTGCAAATACCGAAAAAAATTCCCAACTCTCTATTTTACAAGCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACAt                                                                                                                                                                                                                  >  1:859366/1‑242 (MQ=255)
                         cTGCAAATACCGAAAAAAATTCCCAACTCTCTATTTTACAAGCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTTCCTAAAAAAATAATGTCAAACAACCCCGCCTATCGGTTTTGCACTCAAAAGTGCTTTCTGAAAACAGCCGATTTTGCCTTTATA‑TGTGCCCCCTCACATATAGGGGGATTATTTTTTAAACACCCTTAGGTATTACCTTGCTATTTCa                                                                                                                                                                                                        >  1:98581/1‑251 (MQ=255)
                         cTGCAAATACCGAAAAAAATTCCCAACTCTCTATTTTACAAGCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGAGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGGGATTATTTTTTAACCACCCTTAGGt                                                                                                                                                                                                                         >  1:230673/1‑234 (MQ=255)
                               aTACCGAAAAAAATTCCCAACTCTCTATTTTACAAGCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTccc                                                                                                                                                                                                  <  1:761879/251‑1 (MQ=255)
                                       aaaaaTTCCCAACTCTCTATTTTACAAGCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAAc                                                                                                                                                                                          <  1:718884/251‑1 (MQ=255)
                                                   ctctctATTTTACAAGCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTTTTATTCCGTAAAAAAAAAATGTGAAACAACCGCGCCTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGGGATTATTTTTTTACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGtt                                                                                                                                                                              >  1:84241/1‑251 (MQ=255)
                                                    tctctATTTTACAAGCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTTGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCCAAGTTATAGGGTGATTATTTTTTAACCACCCTTATGTATTACATTGCTATTTTATGTCCCAGTGGAACAGGCCCAATGttt                                                                                                                                                                             >  1:335381/1‑251 (MQ=255)
                                                     ctctATTTTACAAGCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGtttt                                                                                                                                                                            <  1:767749/251‑1 (MQ=255)
                                                       ctATTTTACAAGCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTAc                                                                                                                                                                                                                    <  1:865999/209‑1 (MQ=255)
                                                        tATTTTACAAGCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGAt                                                                                                                                                                         <  1:791119/251‑1 (MQ=255)
                                                                  gCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTAt                                                                                                                                                                                                                       <  1:310722/195‑1 (MQ=255)
                                                                  gCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGa                                                                                                                                                                  >  1:380543/1‑248 (MQ=255)
                                                                       atatAACGTAATTCAGGCCGAAAAAGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGt                                                                                                                                                                                                                         <  1:822580/188‑1 (MQ=255)
                                                                       atatAACGTAATTCAGGCCCAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGCTTTTGCTTTTTTA‑TGTCCCCCCTAAGTTATAGGGGGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTcca                                                                                                                                                           >  1:104248/1‑248 (MQ=255)
                                                                            aCGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGt                                                                                                                                                                                                                         <  1:24276/183‑1 (MQ=255)
                                                                                                   gTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGct                                                                                                                                                     <  1:128865/228‑1 (MQ=255)
                                                                                                          gTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTACGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTAc                                                                                                                        <  1:426891/250‑1 (MQ=255)
                                                                                                            tCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACagt                                                                                                                     <  1:113416/251‑1 (MQ=255)
                                                                                                              tATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACagtag                                                                                                                   <  1:339541/251‑1 (MQ=255)
                                                                                                              tATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACagtag                                                                                                                   <  1:176779/251‑1 (MQ=255)
                                                                                                                   cGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTagtgagt                                                                                                              <  1:884981/251‑1 (MQ=255)
                                                                                                                     ggTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTagtgagtg                                                                                                             >  1:571240/1‑250 (MQ=255)
                                                                                                                     ggTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTagtgagtg                                                                                                             >  1:23074/1‑250 (MQ=255)
                                                                                                                     ggTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTagtga                                                                                                                >  1:171454/1‑247 (MQ=255)
                                                                                                                                  tAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTAGTGAGTGCCGATGCTTTATGt                                                                                               <  1:273729/251‑1 (MQ=255)
                                                                                                                                            atGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTAGTGAGTGCCGATGCTTTATGTAAAAcacca                                                                                      >  1:283220/1‑250 (MQ=255)
                                                                                                                                              gtgAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTagtg                                                                                                                 >  1:264137/1‑221 (MQ=255)
                                                                                                                                              gtgAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTAGTGAGTGCCGATGCTTTATGTAAAACACCACCg                                                                                   >  1:782896/1‑251 (MQ=255)
                                                                                                                                                          cgcTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTAGTGAGTGCCGATGCTTTATGTAAAACACCACCGCACTTTTACCa                                                                        <  1:380791/250‑1 (MQ=255)
                                                                                                                                                                  tgtTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATg                                                                                                                                                                                >  1:470347/1‑138 (MQ=255)
                                                                                                                                                                   gtTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTAGTGAGTGCCGATGCTTTATGTAAAACACCACCGCACTTTTACCATTCCCGTaaa                                                              >  1:752418/1‑251 (MQ=255)
                                                                                                                                                                    tttAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTAGTGAGTGCCGATGCTTTATGTAAAACACCACCGCACTTTTACCATTCCCGTAAAc                                                             <  1:330502/251‑1 (MQ=255)
                                                                                                                                                                    tttAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTAGTGAGTGCCGATGCTTTATGTAAAACACCACCGCACTTTTACCATTCCCGTAAAc                                                             <  1:656798/251‑1 (MQ=255)
                                                                                                                                                                    tttAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTAGTGAGTGCCGATGCTTTATGTAAAACACCACCGCACTTTTACCATTCCCGTAAAc                                                             <  1:556398/251‑1 (MQ=255)
                                                                                                                                                                        gCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAAc                                                                                                                                                                                          >  1:225490/1‑122 (MQ=255)
                                                                                                                                                                        gCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTAGTGAGTGCCGATGCTTTATGTAAAACACCACCGCACTTTTACCATTCCCGTAAACTAtt                                                         >  1:439410/1‑251 (MQ=255)
                                                                                                                                                                               aCGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTa                                                                                                                                                                                                             >  1:128001/1‑96 (MQ=255)
                                                                                                                                                                                  gTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTAGTGAGTGCCGATGCTTTATGTAAAACACCACCGCACTTTTACCATTCCCGTAAACTATTTGCTAATAc                                                <  1:142350/250‑1 (MQ=255)
                                                                                                                                                                                      tttATGAAAAGTGCCGTTTTTGCTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTAGTGAGTGCCGATGCTTTATGTAAAACACCACCGCACTTTTACCATTCCCGTAAACTATTTGCTAATACTATcc                                           <  1:770002/251‑1 (MQ=255)
                                                                                                                                                                                                            cTTTTATA‑TGTCCCCCCTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGt                                                                                                                                                                                                                         >  1:429007/1‑55 (MQ=255)
                                                                                                                                                                                                                    atgtccccccTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTAGTGAGTGCCGATGCTTTATGTAAAACACCACCGCACTTTTACCATTCCCGTAAACTATTTGCTAATACTATCCACCCACTGAAACAACTCATCCAAATCATa              >  1:789671/6‑251 (MQ=255)
                                                                                                                                                                                                                      gtccccccTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACAt                                                                                                                                                                                                                  >  1:449500/4‑53 (MQ=255)
                                                                                                                                                                                                                        ccccccTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTAGTGAGTGCCGATGCTTTATGTAAAACACCACCGCACTTTTACCATTCCCGTAAACTATTTGCTAATACTATCCACCCACTGAAACAACTCATCCAAATCATAATcc          <  1:586145/250‑1 (MQ=255)
                                                                                                                                                                                                                         cccccTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTAGTGAGTGCCGATGCTTTATGTAAAACACCACCGCACTTTTACCATTCCCGTAAACTATTTGCTAATACTATCCACCCACTGAAACAACTCATCCAAATCATAATcc          >  1:683426/1‑250 (MQ=255)
                                                                                                                                                                                                                          ccccTAAGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTAGTGAGTGCCGATGCTTTATGTAAAACACCACCGCACTTTTACCATTCCCGTAAACTATTTGCTAATACTATCCACCCACTGAaac                               <  1:613032/228‑1 (MQ=255)
                                                                                                                                                                                                                               aaGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACagtag                                                                                                                   >  1:582456/1‑139 (MQ=255)
                                                                                                                                                                                                                               aaGTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTAGTGAGTGCCGATGCTTTATGTAAAACACCACCGCACTTTTACCATTCCCGTAAACTATTTGCTAATACTATCCACCCACTGAAACAACTTATCCAAATCATAATCCCCCGCAt   >  1:863007/1‑251 (MQ=255)
                                                                                                                                                                                                                                 gTTATAGGGTGATTATTTTTTAACCACCCTTAGGt                                                                                                                                                                                                                         <  1:680032/35‑1 (MQ=255)
                                                                                                                                                                                                                                 gTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCa                                                                                                                                                                                                        >  1:519853/1‑52 (MQ=255)
                                                                                                                                                                                                                                 gTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTAGTGAGTGCCGATGCTTTATGTAAAACACCACCGCACTTTTACCATTCCCGTAAAc                                                             >  1:786870/1‑191 (MQ=255)
                                                                                                                                                                                                                                 gTTATAGGGTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTAGTGAGTGCCGATGCTTTATGTAAAACACCACCGCACTTTTACCATTCCCGTAAACTATTTGCTAATACTATCCACCCACTGAAACAACTCATCCAAATCATAATCCCCCGCATg  >  1:858190/1‑250 (MQ=255)
                                                                                                                                                                                                                                       gggTGATTATTTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTAGTGAGTGCCGATGCTTTATGTAAAACACCACCGCACTTTTACCATTCCCGTAAACTATTTGCTAATACTATCCACCCACTGAAACAACTCATCCAAATCATAATcc          >  1:615348/1‑236 (MQ=255)
                                                                                                                                                                                                                                               attTTTTAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCCACAAGCTCTGACT‑AAGCTCAACGATCGTCCTCTACAGTAGTGAGTGCCGATGCTTTATGTAAAACACCACCGCACTTTTCCCATTCCCGTAAACTATTTGCTAATAc                                                <  1:435402/189‑1 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                     
TCCGAATTACGTGAATGGTTAACCGCTGCAAATACCGAAAAAAATTCCCAACTCTCTATTTTACAAGCCAAATATAACGTAATTCAGGCCGAAAATGCGGTTTACAGTTCTATGGCGGGTTATTATTCCGTAAAAAAATAATGTGAAACAACCGCGCTTATGTGTTTAGCATACAACGGTGCTTTATGAAAAGTGCCGTTTTTGCTTTTATA‑TGT‑CCCCCTAAGTTATAGGGTGATTATTTTTCAACCACCCTTAGGTATTACATTGCTATTTCATGTCCCAGTGGAACAGGCCCAATGTTTTGATAGCCAGAAGCTCGACAAGCTCTGACTCAAGCTCAACGATCGTCCTCTACAGTAGTGAGTGCCGATGCTTTATGTAAAACACCACCGCACTTTTACCATTCCCGTAAACTATTTGCTAATACTATCCACCCACTGAAACAACTCATCCAAATCATAATCCCCCGCATG  >  1/1305193‑1305665

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑