Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,286,610 T→C intergenic (+127030/+134327) unknown → / ← unknown tRNA‑Val‑GAC/tRNA‑Met‑CAT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,286,6100TC100.0% 148.0 / NA 52intergenic (+127030/+134327)unknown/unknowntRNA‑Val‑GAC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (22/30);  total (22/30)

TCTCATCGGCTTTTGCCGCTTCGGCAGTCGCCGGTGCTGATTGTGTTTGGGCTGCCGCTTCCGGTTTTGCATCCGGCGCTTTGTCTGCCGGTTTATCACAAGCAGTCAAGAAAAGAGCAAATAAAGCAGTTGCACTGATTTTAGTAAATTTGTTCATATTAAAATCCTTTATGAGTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGTCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTTACGGCCACTTCTTTTTCATCAATCACTAGCGTAATCACGTCGGAATAGAAAGTATCGTGCACTTGTGCATTGTTTACATCATCAT  >  1/1286393‑1286851
                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                 
tctcATCGGCTTTTGCCGCTTCGGCAGTCGCCGGTGCTGATTGTGTTTGGGCTGCCGCTTCCGGTTTTGCATCCGGCGCTTTGTCTACCGGTTTATCACAAGCAGTCAAGAAAAGAGCAAATAAAGCAGTTGCACTGATTTTAGTAAATTTGTTCATATTAAAATCCTTTATGAGTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAAc                                                                                                                                                                                                                  <  1:116857/251‑1 (MQ=255)
                       gCAGTCGCCGGTGCTGATTGTGTTTGGGCTGCCGCTTCCGGTTTTGCATCCGGCGCTTTGTCTACCGGTTTATCACAAGCAGTCAAGAAAAGAGCAAATAAAGCAGTTGCACTGATTTTAGTAAATTTGTTCATATTAAAATCCTTTATGAGTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGaaaaa                                                                                                                                                                                            <  1:403765/250‑1 (MQ=255)
                                                    tGCCGCTTCCGGTTTTGCATCCGGCGCTTTGTCTAACGGTTTATCACAAGCAGTCAAGAAAAGAGCAAATAAAGCAGTTGCACTGATTTTAGTAAATTTGTTCATATTAAAAACCTTTATGAGTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAGCCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTatcaatc                                                                                                                                                              <  1:659409/251‑1 (MQ=255)
                                                                     cATCCGGCGCTTTGTCTACCGGTTTATCACAAGCAGTCAAGAATAGAGCAAATAAAGCAGTTGCACTGATTTTAGTAAATTTGTTCATATTAAAATCCTTTATGAGTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAg                                                                                                                                             <  1:600911/251‑1 (MQ=255)
                                                                     cATCCGGCGCTTTGTCTACCGGTTTATCACAAGCAGTCAAGAAAAGAGCAAATAAAGCAGTTGCACTGATTTTAGTAAATTTGTTCATATTAAAATCCTTTATGAGTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAg                                                                                                                                             <  1:802951/251‑1 (MQ=255)
                                                                                         ggTTTATCACAAGCAGTCAAGAAAAGAGCAAATAAAGCAGTTGCACTGATTTTAGTAAATTTGTTCATATTAAAATCCTTTATGAGTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTgg                                                                                                                         >  1:723915/1‑251 (MQ=255)
                                                                                          gTTTATCACAAGCAGTCAAGAAAAGAGCAAATAAAGCAGTTGCACTGATTTTAGTAAATTTGTTCATATTAAAATCCTTTATGAGTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAacac                                                                                                                                                     <  1:262731/222‑1 (MQ=255)
                                                                                          gTTTATCACAAGCAGTCAAGAAAAGAGCAAATAAAGCAGTTGCACTGATTTTAGTAAATTTGTTCATATTAAAATCCTTTATGAGTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAAtgt                                                                                                                                      >  1:316764/1‑237 (MQ=255)
                                                                                              aTCACAAGCAGTCAAGAAAAGAGCAAATAAAGCAGTTGCACTGATTTTAGTAAATTTGTTCATATTAAAATCCTTTATGAGTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAAtg                                                                                                                                       <  1:211820/232‑1 (MQ=255)
                                                                                                        gTCAAGAAAAGAGCAAATAAAGCAGTTGCACTGATTTTAGTAAATTTGTTCATATTAAAATCCTTTATGAGTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAACCTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACg                                                                                                          >  1:435726/1‑251 (MQ=255)
                                                                                                        gTCAAGAAAAGAGCAAATAAAGCAGTTGCACTGATTTTAGTAAATTTGTTCATATTAAAATCCTTTATGAGTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTc                                                                                                                                                                                        >  1:58870/1‑173 (MQ=255)
                                                                                                        gTCAAGAAAAGAGCAAATAAAGCAGTTGCACTGATTTTAGTAAATTTGTTCATATTAAAATCCTTTATGAGTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACg                                                                                                          >  1:517525/1‑251 (MQ=255)
                                                                                                          cAAGAAAAGAGCAAATAAAGCAGTTGCACTGATTTTAGTAAATTTGTTCATATTAAAATCCTTTATGAGTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAAc                                                                                                                                                                                          >  1:891133/1‑169 (MQ=255)
                                                                                                                                gTTGCACTGATTTTAGTAAATTTGTTCATATTAAAATCCTTTATGAGTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAg                                                                                                                                             <  1:811136/192‑1 (MQ=255)
                                                                                                                                        gATTTTAGTAAATTTGTTCATATTAAAATCCTTTATGAGTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCActtctt                                                                          >  1:742958/1‑251 (MQ=255)
                                                                                                                                            ttAGTAAATTTGTTCATATTAAAATCCTTTATGAGTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTtc                                                                      <  1:388785/251‑1 (MQ=255)
                                                                                                                                                       gTTCATATTAAAATCCTTTATGAGTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTc                                                                                                                                           <  1:766346/171‑1 (MQ=255)
                                                                                                                                                        ttCATATTAAAATCCTTTATGAGTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAg                                                          <  1:225945/251‑1 (MQ=255)
                                                                                                                                                          cATATTAAAATCCTTTATGAGTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAGCg                                                        <  1:520463/251‑1 (MQ=255)
                                                                                                                                                            tatTAAAATCCTTTATGAGTTTATGGATAAGTATTGATCCGAAAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAGCg                                                        >  1:880934/1‑249 (MQ=255)
                                                                                                                                                             atTAAAATCCTTTATGAGTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAACTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAGCGTaa                                                     >  1:621935/1‑251 (MQ=255)
                                                                                                                                                                aaaaTCCTTTATGAGTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAGCGTAATCa                                                  <  1:335932/251‑1 (MQ=255)
                                                                                                                                                                     ccTTTATGAGTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAGCGTAATCACGTCg                                             >  1:316596/1‑251 (MQ=255)
                                                                                                                                                                             aGTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAGCg                                                        >  1:781236/1‑232 (MQ=255)
                                                                                                                                                                              gTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTg                                                                                                                                                                                                                          >  1:707536/1‑69 (MQ=255)
                                                                                                                                                                              gTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAg                                                                                                                                             <  1:133821/146‑1 (MQ=255)
                                                                                                                                                                              gTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTg                                                                                                  <  1:675291/189‑1 (MQ=255)
                                                                                                                                                                              gTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCActtct                                                                           <  1:379374/212‑1 (MQ=255)
                                                                                                                                                                              gTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAGCGTAATCACGTCGGAATAGaaa                                    >  1:114312/1‑251 (MQ=255)
                                                                                                                                                                              gTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAGCGTAATCACGTCGGAATAGaaa                                    >  1:301097/1‑251 (MQ=255)
                                                                                                                                                                              gTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAGCGTAATCACGTCGGAATAGaa                                     <  1:421497/250‑1 (MQ=255)
                                                                                                                                                                                  aTGGATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAGCGTAATCACGTCGGAATAGAAAGTAt                                <  1:252494/251‑1 (MQ=255)
                                                                                                                                                                                     gATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCAt                                                                                                    <  1:509488/180‑1 (MQ=255)
                                                                                                                                                                                     gATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAGCGTAATCACGTCGGAATAGAAAGTATCGt                             >  1:206413/1‑251 (MQ=255)
                                                                                                                                                                                     gATAAGTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAGCGTAATCACGTCGGAATAGAAAGTATCGt                             >  1:856159/1‑251 (MQ=255)
                                                                                                                                                                                          gTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGaa                                                                                                                                                                                               <  1:134718/84‑1 (MQ=255)
                                                                                                                                                                                          gTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACg                                                                                                                                                    <  1:488924/127‑1 (MQ=255)
                                                                                                                                                                                          gTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTc                                                                                                                                           <  1:637161/136‑1 (MQ=255)
                                                                                                                                                                                          gTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTgg                                                                                                                         >  1:139462/1‑154 (MQ=255)
                                                                                                                                                                                          gTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAGCGTAATCa                                                  >  1:371512/1‑225 (MQ=255)
                                                                                                                                                                                          gTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAGCGTAATCa                                                  <  1:528643/225‑1 (MQ=255)
                                                                                                                                                                                          gTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAGCGTAATCACGTCGGAATAGaa                                     <  1:617701/238‑1 (MQ=255)
                                                                                                                                                                                          gTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAGCGTAATCACGTCGGAATAGAAAGTATCGTGCa                          >  1:353264/1‑249 (MQ=255)
                                                                                                                                                                                          gTATTGATCCGATAAACGGACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAGCGTAATCACGTCGGAATAGAAAGTATCGTGCa                          >  1:547683/1‑249 (MQ=255)
                                                                                                                                                                                                            gACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAGCGTAATCACGTCGGAAt                                         <  1:822756/216‑1 (MQ=255)
                                                                                                                                                                                                            gACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAGCGTAATCACGTCGGAATAGAAAGTATCGTGCAc                         <  1:265732/232‑1 (MQ=255)
                                                                                                                                                                                                            gACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAGCGTAATCACGTCGGAATAGAAAGTATCGTGCACTTGTGCATTGTTTAcatc       <  1:32881/250‑1 (MQ=255)
                                                                                                                                                                                                            gACAAAACATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAGCGTAATCACGTCGGAATAGAAAGTATCGTGCACTTGTGCATTGTTTAcatc       <  1:643838/250‑1 (MQ=255)
                                                                                                                                                                                                                aaaCATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAGCGt                                                       <  1:888315/198‑1 (MQ=255)
                                                                                                                                                                                                                aaaCATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAGCGTAATCACGTCGGAATAGAAAGTATCGTGCACTTGTGCATTGTTTAcatcatcat  <  1:16221/251‑1 (MQ=255)
                                                                                                                                                                                                                  aCATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAGCGTAATc                                                   >  1:589253/1‑200 (MQ=255)
                                                                                                                                                                                                                  aCATGGGCCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTCACGGCCACTTCTTTTTCATCAATCACTAGCGTAATCACGTCGGAATAGAAAGTATCGTGCACTTGTGCATTGTTTAcatc       >  1:112331/1‑244 (MQ=255)
                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                 
TCTCATCGGCTTTTGCCGCTTCGGCAGTCGCCGGTGCTGATTGTGTTTGGGCTGCCGCTTCCGGTTTTGCATCCGGCGCTTTGTCTGCCGGTTTATCACAAGCAGTCAAGAAAAGAGCAAATAAAGCAGTTGCACTGATTTTAGTAAATTTGTTCATATTAAAATCCTTTATGAGTTTATGGATAAGTATTGATCCGATAAACGGACAAAACATGGGTCTTAGACAGAAAATTAAATTATTTGTTCCTAACCTTATTTCCGCCTAAAGAAAAAACTCCGGCAATAACCGGAGTTTTATCAATCATTAAACACGTTTGAAGTCAATGTGAACCAATTTTGGTTTGAACGGGTGACGTTGCATTGCCTGCACTTTTACGGCCACTTCTTTTTCATCAATCACTAGCGTAATCACGTCGGAATAGAAAGTATCGTGCACTTGTGCATTGTTTACATCATCAT  >  1/1286393‑1286851

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑