Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,263,836 G→A intergenic (+104256/+157101) unknown → / ← unknown tRNA‑Val‑GAC/tRNA‑Met‑CAT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,263,8360GA100.0% 190.7 / NA 71intergenic (+104256/+157101)unknown/unknowntRNA‑Val‑GAC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (36/35);  total (36/35)

TTCCGGGGATAAAAACTGGAAAACCGAATTAAACCAATTCTTCAAAGACTTCTCGACCCAATTGACCAAAGCGG‑AATTAGATGAATTGGAGGGCGGTATGCGCCCGAATAATTTGG‑TTGAGACGGATATTTGTTGCCCGACTT‑GCGGTCGCAATATGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTGGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATATTTGCGGCAATAACCCGAATTGTGACGGCTATTTAGTCGAAGAAGGTAAGTTTAAGATTAAAGGTTATGACGGCCCAATCGTTGAATGCGATAAATGCGGCGGTGATATGCAC  >  1/1263590‑1264082
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                      
tcccgggaaaaaaaaCGGAAAAACCAAATAAAACAAATTCTAAAAAGACTTCCCGACCAAATTGACAAAAGGGG‑AATAAGAGGAATGGGGGGGGGGTAGGCGCCCAAATATTTTGG‑TGGAGAGGGATTTTTGTGCCCCGATTG‑GGGGCCGAAATAGGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTc                                                                                                                                                                                                                                                    <  1:14590/241‑1 (MQ=255)
                     aacagAATTAACCCAATTCTAAAAAGACTTCTCGACCCAATTGACCAAAGCGA‑AATAAGATGATTTGGAGGGCGGTATGCCCCCAAATAATTTGG‑TTGAAGGGGATATTTGTTGCCCGACTT‑GCGGTCGAAATATGGCGATAAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAAtg                                                                                                                                                                                                                               <  1:642079/247‑1 (MQ=255)
                      aCCGAATAAAACCAATTCTACAAAGCCTTCTCGCCCAAATGGACCAAAGCGA‑AATTAGATGAATGGGAGGGGGGTATGCGCCCGAATATTTTGG‑TTGAGACGGATTTTTGTTCCCCGCCTT‑GGGGTCGAAATATGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAAtgt                                                                                                                                                                                                                              <  1:120171/251‑1 (MQ=255)
                             aaacccAATTCTTAAAAGCCTTCCCGACCCAATTGACAAAGGGGG‑AATTAGATGAATGGGGGGGGGGTAGGCGCCCAAATATTTTGG‑TTGAGACGGATTTTTTTTGCCCGTTTT‑GCGGTCGCAATAGGGCGATCAAAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGgac                                                                                                                                                                                                                       <  1:270638/247‑1 (MQ=255)
                                           aaaGACTTCTCGACCCAATTGACCAAAGCGG‑AATTAGATGAATTGGAGGGCGGTATGCGCCCGAATAATTTGG‑TTGAGACGGATATTTGTTGCCCGACTT‑GCGGTCGCAATATGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGaaa                                                                                                                                                                                                          >  1:760050/1‑250 (MQ=255)
                                                         ccAATTG‑CCAAAGGGGAAATTAGATGATTGGGGGGGGGGTATGCGCCCGAATATTTTGG‑TTGAGACGAATTTTTGTTCCCCGACTT‑GCGGTCGAAATATGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATgg                                                                                                                                                                                           <  1:245562/251‑1 (MQ=255)
                                                          cAATTGACCAAAGCGG‑AATTAGATGAATTGGAGGGCGGTATGCGCCCGAATAATTTGG‑TTGAGACGGATATTTGTTGCCCGACTT‑GCGGTCGCAATATGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGa                                                                                                                                                                                          >  1:233940/1‑251 (MQ=255)
                                                            aTTGACCAAAGCGG‑AATTAGATGAATTGGAGGGCGGTATGCGCCCGAATAATTTGG‑TTGAGACGGATATTTGTTGCCCGACTT‑GCGGTCGCAATATGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGaa                                                                                                                                                                                         >  1:766951/1‑250 (MQ=255)
                                                                         g‑AATTAGATGAATTGGAGGGCGGTATGCGCCCGAATAATTTGG‑TTGAGACGGATATTTGTTGCCCGACTT‑GCGGTCGCAATATGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGcc                                                                                                                                                                            >  1:560731/1‑250 (MQ=255)
                                                                          aaaTTAGATGATTGGGGGGGGGGTAGGCCCCCGAAT‑ATTTGGTTTGAGCGGGATTTTTGTTCCCCG‑CTTGGGGGTCGCAATAGGGCGATAAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCt                                                                                                                                                                                                                                                  <  1:414160/179‑1 (MQ=255)
                                                                           aaTTAGATGATTGGGGGGGCGGTATGCCCCGGAATAATTTGG‑TGGAGACGGATATTTGTTGCCCGACTT‑GGGGTGGCATTAGGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCg                                                                                                                                                                          <  1:175252/251‑1 (MQ=255)
                                                                                gATGAATTGGAGGGCGGTATGCGCCCGAATAATTTGG‑TTGAGACGGATATTTGTTGCCCGACTT‑GCGGTCGCAATATGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATg                                                                                                                                                                     >  1:98575/1‑251 (MQ=255)
                                                                                 aTGAATTGGAGGGGGGTATGCCCCCGAATAATTTGG‑TTGAGACGAATTTTTGTTCCCCGACTT‑GCGGCCGCAATATGGCGATCAAAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATg                                                                                                                                                                     <  1:352930/250‑1 (MQ=255)
                                                                                 aTGAATGGGAGGGCGGTATGCGCCAAAATAATTTGG‑TGGAGACGGATTTTTGTTGCCCGATTT‑GCGGTCGAAATAGGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAAt                                                                                                                                                                      <  1:686981/249‑1 (MQ=255)
                                                                                      aaaggcggaggtgtgccccaaaatattTTGG‑TTGAGACGGTTTTTTGTTGCCCGCCTT‑GCGGTCGAAATATGGCGAACAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTAc                                                                                                                                                               <  1:600985/230‑1 (MQ=255)
                                                                                            gggggtaggccccgaaatattTTGG‑TGGAGAGGGATTTTTGTGGCCCGCCTG‑GCGGCCGAAATGGGGCGATAAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGa                                                                                                                                                          <  1:811389/235‑1 (MQ=255)
                                                                                             gCGGTATGCGCCCGAATAATTTGG‑TTGAGACGGATATTTGTTGCCCGACTT‑GCGGTCGCAATATGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATg                                                                                                                                                        >  1:117221/1‑251 (MQ=255)
                                                                                                gTATGCGCCCGAATAATTTGG‑TTGAGACGGATATTTGTTGCCCGACTT‑GCGGTCGCAATATGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGaa                                                                                                                                                                                                                                               >  1:97204/1‑161 (MQ=255)
                                                                                                gTATGCGCCCGAATAATTTGG‑TTGAGACGGATATTTGTTGCCCGACTT‑GCGGTCGCAATATGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAAtg                                                                                                                                                                                                                               >  1:864938/1‑177 (MQ=255)
                                                                                                gTATGCGCCCGAATAATTTGG‑TTGAGACGGATATTTGTTGCCCGACTT‑GCGGTCGCAATATGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGa                                                                                                                                                      >  1:846750/1‑250 (MQ=255)
                                                                                                gTATGCGCCCGAATAATTTGG‑TTGAGACGGATATTTGTTGCCCGACTT‑GCGGTCGCAATATGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGa                                                                                                                                                      >  1:97432/1‑250 (MQ=255)
                                                                                                 tATGCGCCAGAATATTTTGG‑TTGAGACGGATTTTTGTTGCCCGACTT‑GCGGTCGAAATATGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGAc                                                                                                                                                     <  1:58458/250‑1 (MQ=255)
                                                                                                     cgcCCGAATAATTTGG‑TTGAGACGGATATTTGTTGCCCGACTT‑GCGGTCGCAATATGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTta                                                                                                                                                >  1:390924/1‑251 (MQ=255)
                                                                                                       cccGAATAATTTGG‑TTGAGACGGATATTTGTTGCCCGACTT‑GCGGTCGCAATATGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTtata                                                                                                                                              >  1:362027/1‑251 (MQ=255)
                                                                                                          gAATAATTTGG‑TTGAGACGGATATTTGTTGCCCGACTT‑GCGGTCGCAATATGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTAtatta                                                                                                                                           >  1:8171/1‑251 (MQ=255)
                                                                                                          aaatatttggg‑TTGAGGCGGATTTTTGTTGCCCGTCTT‑GCGGTCGAAATAGGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTAtatta                                                                                                                                           <  1:545226/242‑1 (MQ=255)
                                                                                                          aaatattTTGG‑TGGAGGCGGATTTTTTTTGCCCGACTT‑GCGGTCGCAATATGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTAtatta                                                                                                                                           <  1:570621/250‑1 (MQ=255)
                                                                                                           aataatTGGG‑TGGAGAGGGATTTTTGTTGCCCGATTT‑GCGGTCGCAATGTGGCGATAAGACCCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTAtattat                                                                                                                                          <  1:143714/251‑1 (MQ=255)
                                                                                                           aaatatttgggtggagaggaatatTGGTTGCCCGACTG‑GCGGCCGAAAGAGGGCGATCAGACCCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTatatat                                                                                                                                           <  1:368666/231‑3 (MQ=255)
                                                                                                               atTTGG‑TTGAGACGGATATTTGTTGCCCGACTT‑GCGGTCGCAATATGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGa                                                                                                                                                          >  1:753614/1‑231 (MQ=255)
                                                                                                               atTTGG‑TTGAGACGGATATTTGTTGCCCGACTT‑GCGGTCGCAATATGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGAt                                                                                                                                      >  1:540066/1‑251 (MQ=255)
                                                                                                                             ggATATTTGTTGCCCGACTT‑GCGGTCGCAATATGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTAtatta                                                                                                                                           >  1:22290/1‑233 (MQ=255)
                                                                                                                              gATATTTGTTGCCCGACTT‑GCGGTCGCAATATGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTAtattat                                                                                                                                          >  1:315625/1‑233 (MQ=255)
                                                                                                                                  tttGTTGCCCGACTT‑GCGGTCGCAATATGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACat                                                                                                                    >  1:55008/1‑251 (MQ=255)
                                                                                                                                      ttgCCCG‑CTTGGCGGTCGCAATATGGCGATCAAAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATAtt                                                                                                                 <  1:487831/250‑1 (MQ=255)
                                                                                                                                                    ggTCGCAATATGGCGACCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATATTTGCGGCAATAAcc                                                                                                    <  1:513536/250‑1 (MQ=255)
                                                                                                                                                         cAATATGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATATTTGCGGCAATAACCCGAAtt                                                                                              >  1:834083/1‑251 (MQ=255)
                                                                                                                                                         aaatggggCGATAAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGgac                                                                                                                                                                                                                       <  1:85303/124‑1 (MQ=255)
                                                                                                                                                                    aaaGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATATTTGCGGCAATAACCCGAATTGTGACGGCTAt                                                                                   <  1:408298/249‑1 (MQ=255)
                                                                                                                                                                           cGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTatat                                                                                                                                             <  1:761678/186‑1 (MQ=255)
                                                                                                                                                                           cGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAAc                                                                                                                         >  1:16030/1‑206 (MQ=255)
                                                                                                                                                                                gTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGc                                                                                                                                                                                >  1:11017/1‑146 (MQ=255)
                                                                                                                                                                                gTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATATTTGCGGCAATAACCCGAATTGTGACGGCTATTTAGTCgaaga                                                                        >  1:101521/1‑250 (MQ=255)
                                                                                                                                                                                     ggCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGTAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTAtatta                                                                                                                                           <  1:738274/178‑1 (MQ=255)
                                                                                                                                                                                     ggCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTatat                                                                                                                                             >  1:786904/1‑176 (MQ=255)
                                                                                                                                                                                     ggCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATATTTg                                                                                                               <  1:682417/206‑1 (MQ=255)
                                                                                                                                                                                     ggCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGC‑AAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTAtatta                                                                                                                                           >  1:854578/1‑177 (MQ=255)
                                                                                                                                                                                       cGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCCCCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATATTTGCGGCAATAACCCGAATTGTGACGGCTATTTAGTCGAAGAAGGTAAGt                                                                <  1:594888/251‑1 (MQ=255)
                                                                                                                                                                                          aTTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATATTTGCGGCAATAACCCGAATTGTGACGGCTATTTAGTCGAAGAAGGTAAGTTTa                                                             >  1:40468/1‑251 (MQ=255)
                                                                                                                                                                                           ttCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAAtgtg                                                                                                                                                                                                                             <  1:443854/90‑1 (MQ=255)
                                                                                                                                                                                           ttCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTatat                                                                                                                                             >  1:708896/1‑170 (MQ=255)
                                                                                                                                                                                           ttCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATATTTGCGGCAATAACCCGAATTGTGACGGCTATTTAGTCGAAGAAGGTAAGTTTaa                                                            >  1:687561/1‑251 (MQ=255)
                                                                                                                                                                                           ttCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATATTTGCGGCAATAACCCGAATTGTGACGGCTATTTAGTCGAAGAAGGTAAGTTTaa                                                            >  1:898894/1‑251 (MQ=255)
                                                                                                                                                                                           ttCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATATTTGCGGCAATAACCCGAATTGTGACGGCTATTTAGTCGAAGAAGGTAAGTTTaa                                                            >  1:443817/1‑251 (MQ=255)
                                                                                                                                                                                           ttCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATATTTGCGGCAATAACCCGAATTGTGACGGCTATTTAGTCGAAGAAGGTAAGTTTaa                                                            >  1:525820/1‑251 (MQ=255)
                                                                                                                                                                                              ttAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATATTTGCGGCAATAACCCGAATTGTGACGGCTATTTAGTCGAAGAAGGTAAGTTTAAGAt                                                         <  1:566075/251‑1 (MQ=255)
                                                                                                                                                                                              ttAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATATTTGCGGCAATAACCCGAATTGTGACGGCTATTTAGTCGAAGAAGGTAAGTTTAAGAt                                                         <  1:156929/251‑1 (MQ=255)
                                                                                                                                                                                                aGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGa                                                                                                                                                                                                                                                <  1:856392/66‑1 (MQ=255)
                                                                                                                                                                                                aGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTAc                                                                                                                                                               <  1:33643/147‑1 (MQ=255)
                                                                                                                                                                                                aGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATATTTGCGGCAATAACCCGAATTGTGACGGCTATTTAGTCGAAGAAGGTAAGTTTAAGATTa                                                       >  1:817496/1‑251 (MQ=255)
                                                                                                                                                                                                          ggCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATATTTGCGGCAATAACCCGAATTGTGACGGCTATTTAGt                                                                              <  1:347011/218‑1 (MQ=255)
                                                                                                                                                                                                          ggCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATATTTGCGGCAATAACCCGAATTGTGACGGCTATTTAGTCGAAGAAGGTAAGTTTAAGATTAAAGGTTATGa                                             >  1:10527/1‑251 (MQ=255)
                                                                                                                                                                                                           gCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATATTTGCGGCAATAACCCGAATTGTGACGGCTATTTAGTCGAAGAAGGTAAGTTTAAGATTAAAGGTTATGa                                             <  1:444506/250‑1 (MQ=255)
                                                                                                                                                                                                            cTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATATTTGCGGCAATAACCCGAATTGTGACGGCTATTTAGTCGAAGAAGGTAAGTTTAAGATTAAAGGTTATGAc                                            <  1:500518/250‑1 (MQ=255)
                                                                                                                                                                                                              aTGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTta                                                                                                                                                >  1:484787/1‑148 (MQ=255)
                                                                                                                                                                                                                                      gCAAAACCACCATTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATATTTGCGGCAATAACCCGAATTGTGACGGCTATTTAGTCGAAGAAGGTAAGTTTAAGAt                                                         <  1:175306/211‑1 (MQ=255)
                                                                                                                                                                                                                                               ccaTTAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATATTTGCGGCAATAACCCGAATTGTGACGGCTATTTAGTCGAAGAAGGTAAGTTTAAGATTAAAGGTTATGACGGCCCAATCGTTGAATGCGATAAATGCGGCGGTGat        >  1:187144/1‑251 (MQ=255)
                                                                                                                                                                                                                                                  ttAACCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATATTTGCGGCAATAACCCGAATTGTGACGGCTATTTAGTCGAAGAAGGTAAGTTTAAGATTAAAGGTTATGACGGCCCAATCGTTGAATGCGATAAATGCGGCGGTGATATg     >  1:734547/1‑251 (MQ=255)
                                                                                                                                                                                                                                                     aCCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGc                                                                                                                                                                                >  1:855015/1‑77 (MQ=255)
                                                                                                                                                                                                                                                     aCCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATATTTGCGGCAATAACCCGAATTGTGACGGCTATTTAGTCGAAGAAGGTAAGTTTAAGATTAAAGGTTATGACGGCCCAATCGTTGAATGCGATAAATGCGGCGGTGATATGCAc  <  1:265876/251‑1 (MQ=255)
                                                                                                                                                                                                                                                     aCCTAGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATATTTGCGGCAATAACCCGAATTGTGACGGCTATTTAGTCGAAGAAGGTAAGTTTAAGATTAAAGGTTATGACGGCCCAATCGTTGAATGCGATAAATGCGGCGGTGATATGCAc  <  1:686688/251‑1 (MQ=255)
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                      
TTCCGGGGATAAAAACTGGAAAACCGAATTAAACCAATTCTTCAAAGACTTCTCGACCCAATTGACCAAAGCGG‑AATTAGATGAATTGGAGGGCGGTATGCGCCCGAATAATTTGG‑TTGAGACGGATATTTGTTGCCCGACTT‑GCGGTCGCAATATGGCGATCAGAACCGCCAGTACAGGCGTATTCTTAGGCTGCACCGGCTATGCCTTACCACCGAAAGCACGTTGCAAAACCACCATTAACCTGGTTCCTGAAGCGGAACTATTAAATGTGTTGGACGACGCGTCGGAAACCAAAGCGCTAATGGAACGTAAACGCTGCCCGAAATGCGGTACGGCGATGGACAGTTATATTATCGATCCTCATCGAAAACTACATATTTGCGGCAATAACCCGAATTGTGACGGCTATTTAGTCGAAGAAGGTAAGTTTAAGATTAAAGGTTATGACGGCCCAATCGTTGAATGCGATAAATGCGGCGGTGATATGCAC  >  1/1263590‑1264082

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑