| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,263,344 | A→C | intergenic (+103764/+157593) | unknown → / ← unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,263,344 | 0 | A | C | 91.2% | 140.5 / ‑3.8 | 68 | intergenic (+103764/+157593) | unknown/unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Reads supporting (aligned to +/- strand): ref base A (6/0); new base C (28/34); total (34/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.46e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.75e-01 | |||||||||||
CATGTCAAATGCCTGCGGCACAATATGACAGCACAACATTAACCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAAACCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGAACGCGGTTATGTACGCACCGAAAATCGTCGTTTCTATGC‑GGAAAAAATGGGGGAAATCGTAACGGATCGGTTGAATCAGTCTTTCGCCGATTTAATGAACTACGATTTCACCGCTAATATGGAAGACGTG > 1/1263127‑1263575 | cATGTCAAATGCCTGCGGCACAATATGACAGCACAACATTAACCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTa < 1:451910/251‑1 (MQ=255)cATGTCAAATGCCTGCGGCACAATATGACAGCACAACATTAACCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTa < 1:312310/251‑1 (MQ=255) gTCAAATGCCTGCGGCACAATATGACAGCACAACATTAACCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAAATTAAATTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCCCCGGCCCGTTTCTCTGAAGCAGCGGTGGGaaaa > 1:626368/1‑251 (MQ=255) gTCAAATGCCTGCGGCACAATATGACAGCACAACATTAACCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGGTAACGATAAAATTAACTTGTCGGGAGTGCAACCGCCGCAATATTTTACCAACCCCCCCGCCCGTTTCTCTGAAGCAGCGGTGGTaaaa > 1:484089/1‑251 (MQ=255) caATATGACAGCACAACATTAACCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTTCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCCGCAATATTTTACCAACCCCCCGGCACGTTTCTCTGAAGCAGCGGTGGGAAAAGAATTGGAAAAACGTgg > 1:666844/1‑251 (MQ=255) caATATGACAGCACAACATTAACCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGGAGTGCAAACGCAGCAATATTTTACCAAACCGCCGGCACGGTTCTCTGAAGCAGCGTTGGGAAAAGAATTTGaaaaaagggg > 1:596608/1‑246 (MQ=255) caATATGACAGCACAACATTAACCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAAAGATAAACTTAACTTGTCGGAAGAGCAACCGCAGCAATATTTCACCAAACCGCCGGCAAGGTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAAAGTgg > 1:387383/1‑251 (MQ=255) caATATGACAGCACAACATTAACCGTAACAGCGGGGGATTACAGTTTAACCGCAAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAAAAAAGAAAATCTGCAGAAGATCAGGCGTTACCGGCGT‑TTCCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACg < 1:592651/248‑1 (MQ=255) atatGACAGCACAACATTAACCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGGCTTTCGTTTAAC‑AAAAACTTATTTTTTCTGGAGTGCCACCTACGCCATATTTTCCCAAACCTCCGGGACGGTTTTCTCTAGCCGCGTAGGTAAAAGAATTGGaaaaaaccgcgt > 1:787855/1‑244 (MQ=255) atatGACAGCACAACATTAACCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAagc < 1:843918/219‑1 (MQ=255) atatGACAGCACAACATTAACCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAAATTAACTTTTCGGAAGGGCAACCGCAGCAATATTTTACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGGAAAAGAATTGGAAAAACGTGGTa > 1:154264/1‑251 (MQ=255) atatGACAGCACAACATTAACCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAAAGATAAAAATAAATTGTCGGAAGTGCAACCGCAGCAATATTTTACCAACCCGCCGGCACGTTTTTCTGAAGCAGCGGTGGGTAAAGAATTGGAAAAACgcgggt > 1:530549/1‑246 (MQ=255) atatGACAGCACAACATTAACCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCCTTAAACATAAACTTAACTTTTCGGGAGTGCCACCCCAGCCAAATTTTACCAACCCGCCGGCACGTTTCTCCGAAGCGGCGTTGGTAAAAGAAATGGAAAAAAGTgggg > 1:540822/1‑249 (MQ=255) tatGACAGCACAACATTAACCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGAAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTAt < 1:181541/251‑1 (MQ=255) gCACAACATTAACCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAAATTAACTTGTCGGGAGTGCAACCGCAGCCATATTTCACCAAACCGCCGGCACGTTTCTCTGAAACAGCGGTTGTAAAAGAATTGGaaaaaagggggatcgggcg > 1:779989/1‑236 (MQ=255) gCACAACATTAACCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTCACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTTGGAAGTGCAACCGCAGCAATATTTTACCAACCCCCCGGCACGGTTCTCTGAAGCAGCGCTGGGAAAAGAATTGGAAAAACGTGGTATTGGCCgg > 1:76376/1‑250 (MQ=255) cacaCCATTAACCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTCCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGc < 1:816892/247‑1 (MQ=255) acaTTAACCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTTCGTTAACGATAAACTTAAATTGTCGGAAGTGGAACCGCCGCAATATTTCACCAACCCCCCGGCACGCTTTTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAAAGTGGTATCGGCCGCCCtt > 1:775395/1‑250 (MQ=255) acaTTAACCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGAAGTGGAACCGCAGCAATATTTCACCCACCCCCCCGCACGGTTCTCTGAAGCAGCGGTGGTAAAAGAAATGGAAAAACGTGGGATCGGCCGTCCtt > 1:759272/1‑250 (MQ=255) acaTTAACCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTAt < 1:250968/239‑1 (MQ=255) ttAACCGTAACAGCGGGGGATTACAGTTTACCCGCGAAAGGG‑CGCTTTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGTAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTCCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCAc < 1:428129/251‑1 (MQ=255) ttAACCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAAAAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCAc < 1:490407/251‑1 (MQ=255) tAACCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACt < 1:646705/251‑1 (MQ=255) aaaCCGAAACAGCGGGGGTTTACATTTTAACCG‑AAAAGGGACGCATTTTACTTTTTGGCGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTCCCGGCGA‑TTTCCGTTAACGATAAATTTAACTTGTCGGAAGTGCAACCGCAGAAATATTACACCACCCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACt < 1:33359/250‑1 (MQ=255) aaCCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTTCGTTAACGATAAACTTAAATTTTCGGGAGTGCAACCGCAGCAAAATTTTACCAACCCCCCGGCACGTTTTTCTGAAGCAGCGGTGGGAAAAGAATTTGAAAAACCGGGTATTGGCCGTCCCTCCAc > 1:648229/1‑249 (MQ=255) aaCCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTTCGTTAACGATAAAATTAAATTTTCGGAAGGGGAACCGCAGCAATAATTCTCCAACCCGCCGGGACGTTTCTCTGAAGCAGCGGTGGGAAAAGAATTGGaaaaaacagggatcggccggccctcccctt > 1:836347/1‑226 (MQ=255) aaCCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTtc < 1:46200/193‑1 (MQ=255) ggATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTTCGTTAAAGAAAAAATTAAATTGTCGGAAAGGCAACCCCAGCAAAATTTCACCAACCCCCCCGCACGTTTTTCTGAAACAGCGTTGGTAAAAAAATTTGAAAAACGTGGGATACGCCGTCCCTCCACTTATTCAGCGATTaatt > 1:823368/1‑248 (MQ=255) ggATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTTCCTTTACGAAAAACTTAAATTGTCGGGAGAGCAACCGCAGCAATATTTCACCAACCCCCCGGCACGTTTTTCTGAAGCAGCGTTGGGAAAAGAAATGGAAAAAAGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTAt > 1:256840/1‑249 (MQ=255) ggATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTTCCTTAACGATAAAATTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCCCCCGCACGGTTCTCTGAAGCAGCGTTGGGAAAAGAAATGGAAAAACGGGGGATCGGCCGTCCTTCCACCTATGCAGCGATTAt > 1:251723/1‑249 (MQ=255) ggATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTTTCGGGAGGGCAACCGCCGCAATATTTTACCAAACCCCCGGCACGTTTTTCTGAAGCAGCGGTGGGAAAAGAATTGGAAAAACGTGGTATCGGCCGGCCTTCCCCTTATGCAGCggtttt > 1:686378/1‑244 (MQ=255) ggATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAAAGATAAAATTAACTTGTCGGAAGTGCAACCGCAGCAATATTTTACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGt > 1:368871/1‑191 (MQ=255) ggATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGGTAACGAAAAAATTAACTTGTCGGGAGGGCAAACGCAGCAATATTTCACCCACCCCCCGGCCCGTTTTTCTTAAGCAGCGTTGGTAAAAGAATTGGAAAAACGCGGGATCGGCCGTCCTTTCCCTTTTTCAGCGATTAt > 1:457886/1‑249 (MQ=255) tACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTAc < 1:480048/251‑1 (MQ=255) tttAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTCCCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAAt < 1:567901/249‑1 (MQ=255) ccGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGCCCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGaa < 1:76882/251‑1 (MQ=255) ccGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGaa < 1:172311/251‑1 (MQ=255) cgcATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGAAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGAACGCGGTTATGt < 1:487369/251‑1 (MQ=255) cATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCCCCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGAACGCGGTTATGTa < 1:772123/250‑1 (MQ=255) cATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGAACGCGGTTATGTAc < 1:23659/251‑1 (MQ=255) aaTTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCACCCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGAACGCGGTTATGTAc < 1:745631/250‑1 (MQ=255) ttACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCGGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGAACGCGGTTATGTACGCAc < 1:872067/251‑1 (MQ=255) ggTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTTTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCCCCCGCACGGTTCTCTGAAGCAGCGTTTGGAAAAGAATTGGAAAAACGGGGTATCGGCCGTCCTTCCACCTATGCAGCGATTATCTCTACAAATCAGGAAAGCGGGTATGTACGCCCCGAAAAacgtcg > 1:22455/1‑251 (MQ=255) gACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCCCCGGCCCGTTTCTCTGAAGCAGCGTTGGGAAAAGAAATGGAAAAACGTGGTATCGGCCGGCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGAACGCGGGTATGTAAGCACCCAAAAacgtcggtttt > 1:594475/1‑246 (MQ=255) gttttACTGCAACAAAGTAATTCTGCAGAGGAACAGGCGTTCCCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTGGGAAGTGCAACCGCAACAATTTTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAg < 1:397674/142‑1 (MQ=255) gtgtTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAAATTAACTTGTCGGGAGGGCAACCGCAGCAATATTTCACCAAACCGCCGGCACGGTTCTCTGAAGCAGCGGTGGGAAAAGAAATGGAAAAAAGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACaaatc > 1:87093/1‑202 (MQ=255) gtgtTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAAAGATAAAATTAACTTGTCGGGAGGGCAACCGCCGCAAAATTTTACCAACCCCCCGGCCCGCTTTTCTGAAGCAGCGTTGGGAAAAAAAATTGAAAAAAGTGGGATCGGCCGTCCTTCCACCTATGCAGCGGTTAtc > 1:331187/1‑195 (MQ=255) cTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAAATTTACTTGTCGGGAACGCAAACCCAGCAATATTTTACCAACCCCCCCGCCCGCTTTTCTGAAGCAGGGGTGGGAAAAAAAATGGAAAAACGGGGGATCGGCCGGCCCTCCCCTTATTCAGCGAATATCTCTACAATTCAGGAACGCGGGTATGTACGCACCGCAAAACGTCGTTTCTATGC‑GGaaaaaaa > 1:812956/1‑250 (MQ=255) acaaAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAGCGATAAGCTTAGCTTGTCGGAAGTGCAACCGCAGCAATATTCCACCACCCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGAACGCGGTTATGTACGCACCGAAAATCGTCGTTTCTATGC‑GGAAAAAATggggg < 1:150266/251‑1 (MQ=255) aaaGTAAATCTGCAGAAGATCAGGCGTTCCCGGCGG‑TTTCCATTAACGATAAACTTAACTTGTCGGAAGTGCAACCGAAGCAATATTTCCCCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGAACGCGGTTATGTACGCACCGAAAATCGTCGTTTCTATGC‑GGAAAAAATGGGGGaa < 1:807331/251‑1 (MQ=255) aaGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACAATAAACTTAAATTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAAAGCGGTATCGGCCGTCCTTCCACTTTTGCAGCGATTATCTCTACAATTCAGGAACGCGGGTATGTACGCACCGAAAATCGTCGTTTTTATGC‑GGGAAAAATGGGGGaaa > 1:151774/1‑251 (MQ=255) tAAATCTGCAGAAGATCAGGCGTTCCCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGAACGCGGTTATGTACGCACCGAAAATCGTCGTTTCTATGC‑GGAAAAAATGGGGGAAATCg < 1:206536/251‑1 (MQ=255) gCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGGAGTGCAACCGCAGCAATATTTTACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGGTGGTAAAAAAAATGGAAAAACGGGGTATCGGCCGTCCTTCCACCTATGCAGCGATTATCTCTACAATTCAGGAAAGCGGGTATGTACGCACCCAAAATCGTCGTTTCTATGCGGGAAAAAAAGGGGG‑AATCGGAACggg > 1:653511/1‑250 (MQ=255) ggCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAg < 1:407540/152‑1 (MQ=255) gCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTACCTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGAACGCGGTTATGTACGCACCGAAAATCGTCGTTTCTATGC‑GGAAAAAATGGGGGAAATCGTAACGGATCGGTTGAATc < 1:474784/250‑1 (MQ=255) gCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGAACGCGGTTATGTACGCACCGAAAATCGTCGTTTCTATGC‑GGAAAAAATGGGGGAAATCGTAACGGATCGGTTGAATc < 1:205631/250‑1 (MQ=255) g‑TTTCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGAACGCGGTTATGTACGCACCGAAAATCGTCGTTTCTATGC‑GGAAAAAATGGGGGAAATCGTAACGGATCGGTTGAATCAGTCTTTCGCCg < 1:736373/250‑1 (MQ=255) ccGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGAACGCGGTTATGTACGCACCGAAAATCGTCGTTTCTATGC‑GGAAAAAATGGGGGAAATCGTAACGGATCGGTTGAATCAGTCTTTCGc > 1:805514/1‑244 (MQ=255) aCGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGAACGCGGTTATGTACGCACCGAAAATCGTCGTTTCTATGC‑GGAAAAAATGGGGGAAATCGTAACGGATCGGTTGAATCAGTCTTTCGCCGATTTAATGaa > 1:293698/1‑250 (MQ=255) gATAAACTTAACTTGTCGGAAGTGCACCCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGAACGCGGTTATGTACGCACCGAAAATCGTCGTTTCTATGC‑GGAAAAAATGGGGGAAATCGTAACGGATCGGt < 1:291189/220‑1 (MQ=255) aaaCTTACCTTGTCGAAAGTCCAACCCAAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGAACGCGGTTATGTACGCACCGAAAATCGTCGTTTCTATGC‑GGAAAAAATGGGGGAAATCGTAACGGATCGGTTGAATCAGTCTTTCGCCGATTTAATGAACTACGa < 1:580880/251‑1 (MQ=255) aacttaacttGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGAACGCGGTTATGTACGCACCGAAAATCGTCGTTTCTATGC‑GGAAAAAATGGGGGAAATCGTAACGGATCGGTTGAATCAGTCTTTCGCCGATTTAATGa > 1:378228/1‑243 (MQ=255) aacttaacttGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGAACGCGGTTATGTACGCACCGAAAATCGTCGTTTCTATGC‑GGAAAAAATGGGGGAAATCGTAACGGATCGGTTGAATCAGTCTTTCGCCGATTTAATGAACTACGAt > 1:804195/1‑251 (MQ=255) cttGTCGGAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGAACGCGGTTATGTACGCACCGAAAATCGTCGTTTCTATGC‑GGAAAAAATGGGGGAAATCGTAACGGATCGGTTGAATCAGTCTTTCGCCGATTTAATGAACTACGATTTCACCg > 1:839578/1‑251 (MQ=255) gAAGTGCAACCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGAACGCGGTTATGTACGCACCGAAAATCGTCGTTTCTATGC‑GGAAAAAATGGGGGAAATCGTAACGGATCGGTTGAATCAGTCTTTCGCCGATTTAATGAACTACGATTTCACCGCTAata < 1:667518/250‑1 (MQ=255) cAACCGCAGCAATATTTCCCCACCCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGAACGCGGTTATGTACGCACCGAAAATCGTCGTTTCTATGC‑GGAAAAAATGGGGGAAATCGTAACGGATCGGTTGAATCAGTCTTTCGCCGATTTAATGAACTACGATTTCACCGCTAATATGGAAGa < 1:846030/251‑1 (MQ=255) aaCCGCAGCAATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGAACGCGGTTATGTACGCACCGAAAATCGTCGTTTCTATGC‑GGAAAAAATGGGGGAAATTGTAACGGATCGGTTGAATCAGTCTTTCGCCGATTTAATGAACTACGATTTCACCGCTAATATGGAAGAc < 1:624662/251‑1 (MQ=255) cagcaATATTTCACCAACCCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGAACGCGGTTATGTACGCACCGAAAATCGTCGTTTCTATGC‑GGAAAAAATGGGGGAAATCGTAACGGATCGGTTGAATCAGTCTTTCGCCGATTTAATGAACTACGATTTCACCGCTAATATGGAAGACGTg > 1:107508/1‑249 (MQ=255) | CATGTCAAATGCCTGCGGCACAATATGACAGCACAACATTAACCGTAACAGCGGGGGATTACAGTTTAACCGCGAAAGGG‑CGCATTTTACGTTTTGACGGTTGGACCAAAGTGTTACTGCAACAAAGTAAATCTGCAGAAGATCAGGCGTTACCGGCGG‑TTTCCGTTAACGATAAACTTAACTTGTCGGAAGTGCAACCGCAGCAATATTTCACCAAACCGCCGGCACGTTTCTCTGAAGCAGCGTTGGTAAAAGAATTGGAAAAACGTGGTATCGGCCGTCCTTCCACTTATGCAGCGATTATCTCTACAATTCAGGAACGCGGTTATGTACGCACCGAAAATCGTCGTTTCTATGC‑GGAAAAAATGGGGGAAATCGTAACGGATCGGTTGAATCAGTCTTTCGCCGATTTAATGAACTACGATTTCACCGCTAATATGGAAGACGTG > 1/1263127‑1263575 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |