| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,262,180 | G→A | intergenic (+102600/+158757) | unknown → / ← unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,262,180 | 0 | G | A | 98.2% | 144.5 / ‑5.0 | 56 | intergenic (+102600/+158757) | unknown/unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base A (36/19); total (37/19) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AAAACCATTAATAAATATTTAGGAAACAATTATGTAGTGAAATCCAGCGTGGGGCATATTCGCGATTTGCCAACCGTGGGTTCCTCCACTGGAGAAAAAGCCAAAGCCATTTCCACCAAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAGATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCCGCGTGGTGTTTAATGAAATTACCAAAAACGCCATTAAACAAGCCTTTGAACACCCCGAACATTTGAATATGGATCGCGTTAACGCACAGC > 1/1261953‑1262424 | aaaaCCATTAATAAATATTTAGGAAACAATTATGTAGTGAAATCCAGCGTGGGGCATATTCGCGATTTGCCAACCGTGGGTTCCTCCACTGGAGAAAAAGCCAAAGCCATTTCCACCAAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAg < 1:337419/250‑1 (MQ=255) ccATTAATAAATATTTAGGAAACAATTATGTAGTGAAATCCAGCGTGGGGCATATTCGCGATTTGCCAACCGTGGGTTCCTCCACTGGAGAAAAAGCCAAAGCCATTTCCACCAAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGtt > 1:27042/1‑251 (MQ=255) ccATTAATAAATATTTAGGAAACAATTATGTAGTGAAATCCAGCGTGGGGCATATTCGCGATTTGCCAACCGTGGGTTCCTCCACTGGAGAAAAAGCCAAAGCCATTTCCACCAAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGtt > 1:551258/1‑251 (MQ=255) aataaataTTTAGGAAACAATTATGTAGTGAAATCCAGCGTGGGGCATATTCGCGATTTGCCAACCGTGGGTTCCTCCACTGGAGAAAAAGCCAAAGCCATTTCCACCAAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGa > 1:328043/1‑251 (MQ=255) taaataTTTAGGAAACAATTATGTAGTGAAATCCAGCGTGGGGCATATTCGCGATTTGCCAACCGTGGGTTCCTCCACTGGAGAAAAAGCCAAAGCCATTTCCACCAAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGGGGTTGCCGaa > 1:391303/1‑250 (MQ=255) ggAAACAATTATGTAGTGAAATCCAGCGTGGGGCATATTCGCGATTTGCCAACCGTGGGTTCCTCCACTGGAGAAAAAGCCAAAGCCATTTCCACCAAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAAtct > 1:621427/1‑249 (MQ=255) cAATTATGTAGTGAAATCCAGCGTGGGGCATATTCGCGATTTGCCAACCGTGGGTTCCTCCACTGGAGAAAAAGCCAAAGCCATTTCCACCAAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAAtct > 1:689833/1‑244 (MQ=255) gCGTGGGGCATATTCGCGATTTGCCAACCGTGGGTTCCTCCACTGGAGAAAAAGCCAAAGCCATTTCCACCAAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTa > 1:584885/1‑250 (MQ=255) gCGTGGGGCATATTCGCGATTTGCCAACCGTGGGTTCCTCCACTGGAGAAAAAGCCAAAGCCATTTCCACCAAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTa > 1:204251/1‑250 (MQ=255) cGTGGGGCATATTCGCGATTTGCCAACCGTGGGTTCCTCCACTGGAGAAAAAGCCAAAGCCATTTCCACCAAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTAcc < 1:47480/251‑1 (MQ=255) gTGGGGCATATTCGCGATTTGCCAACCGT‑GGTTCCTCCACTGGAGAAAAAGCCAAAGCCATTTCCACCAAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAAtctct > 1:237719/1‑223 (MQ=255) gCATATTCGCGATTTGCCAACCGTGGGTTCCTCCACTGGAGAAAAAGCCAAAGCCATTTCCACCAAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTAcc < 1:900640/245‑1 (MQ=255) atatTCGCGATTTGCCAACCGTGGGTTCCTCCACTGGAGAAAAAGCCAAAGCCATTTCCACCAAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAGATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCAc > 1:613820/1‑250 (MQ=255) aTTTGCCAACCGTGGGTTCCTCCACTGGAGAAAAAGCCAAAGCCATTTCCACCAAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGAt < 1:474805/251‑1 (MQ=255) aTTTGCCAACCGTGGGTTCCTCCACTGGAGAAAAAGCCAAAGCCATTTCCACCAAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGAt < 1:117410/251‑1 (MQ=255) ccGTGGGTTCCTCCACTGGAGAAAAAGCCAAAGCCATTTCCACCAAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGT‑GTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGgag > 1:1002/1‑251 (MQ=255) cGTGGGTTCCTCCACTGGAGAAAAAGCCAAAGCCATTTCCACCAAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGgag < 1:182503/251‑1 (MQ=255) cGTGGGTTCCTCCACTGGAGAAAAAGCCAAAGCCATTTCCACCAAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGgag < 1:899382/251‑1 (MQ=255) ccACTGGAGAAAAAGCCAAAGCCATTTCCACCAAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTCATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGc > 1:327785/1‑250 (MQ=255) caaagccaTTTCCACCAAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAg < 1:319964/251‑1 (MQ=255) caTTTCCACCAAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCACAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATcg > 1:425916/1‑251 (MQ=255) aTTTCCACCAAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAgaga > 1:254852/1‑212 (MQ=255) tttCCACCAAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATcggc < 1:232874/251‑1 (MQ=255) ccaccaAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGgag > 1:59895/1‑213 (MQ=255) ccaccaAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGt > 1:316974/1‑241 (MQ=255) caAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCgatg > 1:392274/1‑251 (MQ=255) gTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTtat > 1:17123/1‑251 (MQ=255) gaagaaAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCcg > 1:116301/1‑251 (MQ=255) aaaaaCAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCCGCgtg > 1:461826/1‑251 (MQ=255) aaaCAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCCGCgtggg > 1:287046/1‑250 (MQ=255) gCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCCGCGTGGTGttt < 1:115192/249‑1 (MQ=255) cGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCCGCGTGGTGTTTAAt > 1:171046/1‑251 (MQ=255) aTAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCCGCGTGGTGTTTAATg < 1:449772/250‑1 (MQ=255) aaaaaGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAgaga > 1:495855/1‑163 (MQ=255) aaaGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCCGCGTGGTGTTTAATGAAATTACCaaaaa > 1:783441/1‑251 (MQ=255) ggAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCCGCGTGGTGTTTAATg < 1:346437/230‑1 (MQ=255) cTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCCGCGTGGTGTTTAATGAAATTACCAAAAACGCCATTAAAc < 1:728997/249‑1 (MQ=255) cTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCCGCGTGGTGTTTAATGAAATTACCAAAAACGCCATTAAAc < 1:692413/249‑1 (MQ=255) aGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCCGCGTGGTGTTTAATGAAATTACCAAAAACGCCATTAAACAAGc > 1:110686/1‑249 (MQ=255) cGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAgaga > 1:397361/1‑137 (MQ=255) cGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCCGCGTGGTGTTTAATGAAATTACCAAAAACGCCATTAAACAAGCCTTTGAaca > 1:488718/1‑251 (MQ=255) gCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCACTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCCGCGTGGTGTTTAATGAAATTACCAAAAACGCCATTAAACAAGCCTTTGAaca > 1:596429/1‑250 (MQ=255) cATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCCGCGTGGTGTTTAATGAAATTACCAAAAACGCCATTAAACAAGCCTTTGAacac > 1:657233/1‑250 (MQ=255) gCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAGAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCCGCGTGGTGTTTAATGAAATTACCAAAAACGCCATTAAACAAGCCTTTGAACACCCCGaa > 1:807633/1‑251 (MQ=255) gCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGc > 1:730889/1‑191 (MQ=255) aCCCTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCCGCGTGGTGTTTAATGAAATTACCAAAAACGCCATTAAACAAGcc > 1:230284/1‑230 (MQ=255) cccctATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCCGCGTGGTGTTTAATGAAATTACCAAAAACGCCATTAAACAAGCCTTTGAacac < 1:492993/234‑1 (MQ=255) cccTTATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATA‑‑‑GCGTGGTGTTTAATGAAATTACCAAAAACGCCATTAAACAAGCCTTTGAACACCCCGAACATTTGAata > 1:335938/1‑251 (MQ=255) tATCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCCGCGTGGTGTTTAATGAAATTACCAAAAACGCCATTAAACAAGCCTTTGAACACCCCGAACATTTGAatat > 1:832304/1‑251 (MQ=255) tCACAGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCCGCGTGGTGTTTAATGAAATTACCAAAAACGCCATTAAACAAGCCTTTGAACACCCCGAACATTTGAATATgg < 1:220589/251‑1 (MQ=255) caGTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCg < 1:787568/124‑1 (MQ=255) gTTGGAAAGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCCGCGTGGTGTTTAATGAAATTACCAAAAACGCCATTAAACAAGCCTTTGAac > 1:185186/1‑225 (MQ=255) aaaGCCAACTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCCGCGTGGTGTTTAATGAAATTACCAAAAACGCCATTAAACAAGCCTTTGAACACCCCGAACATTTGAatat < 1:676535/239‑1 (MQ=255) cTATCAAATTCTCCTCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCCGCGTGGTGTTTAATGAAATTACCAAAAACGCCATTAAACAAGCCTTTGAACACCCCGAACATTTGAATATGGATCGCGTTAACGCACAGc < 1:662273/251‑1 (MQ=255) cTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCCGCGTGGTGTTTAATGAAATTACCAAAAACGCCATTAAACAAGCCTTTGAACACCCCGAACATTTGAATATGGATCGCGTTAACGc > 1:250537/1‑246 (MQ=255) cTATCAAATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCCGCGTGGTGTTTAATGAAATTACCAAAAACGCCATTAAACAAGCCTTTGAACACCCCGAACATTTGAATATGGATCGCGTTAACGCACAg > 1:824490/1‑250 (MQ=255) | AAAACCATTAATAAATATTTAGGAAACAATTATGTAGTGAAATCCAGCGTGGGGCATATTCGCGATTTGCCAACCGTGGGTTCCTCCACTGGAGAAAAAGCCAAAGCCATTTCCACCAAAGGGCTCAGTGCGGAAGAAAAACAGGCGATAAAACACAAAAAAGAACAGGAAGCTTTAGTCAAACGCATGGGCATTGACCCTTATCACAGTTGGAAAGCCAACTATCAGATTCTCCCCGGCAAAGAAAAAGTGGTTGCCGAACTGAAATCTCTCGCAAAAAAAGTTGATCATATTTACCTCGCCACCGATTTGGATAGAGAAGGAGAGGCGATTGCCTGGCATTTGCGTGAAGTCATCGGCGGCGATGATGAACGTTATAGCCGCGTGGTGTTTAATGAAATTACCAAAAACGCCATTAAACAAGCCTTTGAACACCCCGAACATTTGAATATGGATCGCGTTAACGCACAGC > 1/1261953‑1262424 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |