Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,259,514 T→C intergenic (+99934/+161423) unknown → / ← unknown tRNA‑Val‑GAC/tRNA‑Met‑CAT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,259,5140TC100.0% 178.1 / NA 62intergenic (+99934/+161423)unknown/unknowntRNA‑Val‑GAC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (36/26);  total (36/26)

GCTGCAACGCAAGCCAAATTGCCTTGCCGCGATAATCTGTTGGCGGATTTTGAACAAAAATGGCAACAAGACGGCTTGGTGATGGACAAATGGTTTGCTTTGCAAGCCAGCCGCCCGGAAGAAAATGTGTTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGTCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAATTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAACGTATCAGCGAAACGGAAGATTTATCCCGCGATTTGTACGAGAAAATCGAAAAAGCATTACAGTAATATCAAAAAGTGCGGTTAATTTTGA  >  1/1259273‑1259756
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                  
gCTGCAACGCAAGCCAAATTGCCTTGCCGCGATAATCTGTTGGCGGATTTTGAACAAAAATGGCAACAAGACGGCTTGGTGATGGACAAATGGTTTGCTTTGCAAGCCAGCCGCCCGGAAGAAAATGTGTTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGAcc                                                                                                                                                                                                                                            >  1:759531/1‑249 (MQ=255)
 cTGCAACGCAAGCCAAATTGCCTTGCCGCGATAATCTGTTGGCGGATTTTGAACAAAAATGGCAACAAGACGGCTTGGTGATGGACAAATGGTTTGCTTTGCAAGCCAGCCGCCCGGAAGAAAATGTGTTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACgg                                                                                                                                                                                                                                           <  1:88998/250‑1 (MQ=255)
             ccAAATTGCCTTGCCGCGATAATCTGTTGGCGGATTTTGAACAAAAATGGCAACAAGACGGCTTGGTGATGGACAAATGGTTTGCTTTGCAAGCCAGCCGCCCGGAAGAAAATGTGTTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGt                                                                                                                                                                                                                              >  1:847024/1‑251 (MQ=255)
                           cgcgATAATCTGTTGGCGGATTTTGAACAAAAATGGCAACAAGACGGCTTGGTGATGGACAAATGGTTTGCTTTGCAAGCCAGCCGCCCGGAAGAAAATGTGTTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGatat                                                                                                                                                                                                                >  1:591949/1‑251 (MQ=255)
                                 aaTCTGTTGGCGGATTTTGAACAAAAATGGCAACAAGACGGCTTGGTGATGGACAAATGGTTTGCTTTGCAAGCCAGCCGCCCGGAAGAAAATGTGTTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGAt                                                                                                                                                                                                          <  1:892641/251‑1 (MQ=255)
                                             gATTTTGAACAAAAATGGCAACAAGACGGCTTGGTGATGGACAAATGGTTTGCTTTGCAAGCCAGCCGCCCGGAAGAAAATGTGTTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATaa                                                                                                                                                                                              >  1:5720/1‑251 (MQ=255)
                                             gATTTTGAACAAAAATGGCAACAAGACGGCTTGGTGATGGACAAATGGTTTGCTTTGCAAGCCAGCCGCCCGGAAGAAAATGTGTTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATaa                                                                                                                                                                                              >  1:721491/1‑251 (MQ=255)
                                              aTTTTGAACAAAAAGGGCAACAAGACGGCTTGGTGATGGACAAATGGTTTGCTTTGCAAGCCAGCCGCCCGGAAGAAAATGTGTTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATaaa                                                                                                                                                                                             <  1:646606/251‑1 (MQ=255)
                                                               caacaaGACGGCTTGGTGATGGACAAATGGTTTGCTTTGCAAGCCAGCCGCCCGGAAGAAAATGTGTTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGc                                                                                                                                                                            <  1:357708/251‑1 (MQ=255)
                                                                  caaGACGGCTTGGTGATGGACAAATGGTTTGCTTTGCAAGCCAGCCGCCCGGAAGAAAATGTGTTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCtt                                                                                                                                                                          >  1:872572/1‑250 (MQ=255)
                                                                         gCTTGGTGATGGACAAATGGTTTGCTTTGCAAGCCAGCCGCCCGGAAGAAAATGTGTTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACg                                                                                                                                                                                                                                            <  1:138884/177‑1 (MQ=255)
                                                                         gCTTGGTGATGGACAAATGGTTTGCTTTGCAAGCCAGCCGCCCGGAAGAAAATGTGTTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTa                                                                                                                                                                  >  1:205272/1‑251 (MQ=255)
                                                                         gCTTGGTGATGGACAAATGGTTTGCTTTGCAAGCCAGCCGCCCGGAAGAAAATGTGTTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTa                                                                                                                                                                  >  1:246328/1‑251 (MQ=255)
                                                                                 aTGGACAAATGGTTTGCTTTGCAAGCCAGCCGCCCGGAAGAAAATGTGTTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAAc                                                                                                                                                           <  1:696158/250‑1 (MQ=255)
                                                                                   ggACAAATGGTTTGCTTTGCAAGCCAGCCGCCCGGAAGAAAATGTGTTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACgg                                                                                                                                                                                                                                           >  1:307270/1‑168 (MQ=255)
                                                                                   ggACAAATGGTTTGCTTTGCAAGCCAGCCGCCCGGAAGAAAATGTGTTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAAc                                                                                                                                                                                                     <  1:450103/206‑1 (MQ=255)
                                                                                   ggACAAATGGTTTGCTTTGCAAGCCAGCCGCCCGGAAGAAAATGTGTTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGCGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGt                                                                                                                                                        >  1:860310/1‑251 (MQ=255)
                                                                                             tttgctttgcAAGCCAGCCGCCCGGAAGAAAATGTGTTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGttt                                                                                                                                              <  1:793036/251‑1 (MQ=255)
                                                                                                 tggtgtaaGCCAGCCGCCCGGAAGAAAATGTGTTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTc                                                                                                                                          <  1:173861/245‑1 (MQ=255)
                                                                                                                     gaagaaAATGTGTTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCa                                                                                                                      >  1:708715/1‑251 (MQ=255)
                                                                                                                         aaaaTGTGTTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAAc                                                                                                                   <  1:276815/250‑1 (MQ=255)
                                                                                                                              gtgtTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTtgat                                                                                                             >  1:518287/1‑251 (MQ=255)
                                                                                                                              gtgtTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTtgat                                                                                                             >  1:887760/1‑251 (MQ=255)
                                                                                                                              gtgtTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACAGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTtgat                                                                                                             >  1:312220/1‑251 (MQ=255)
                                                                                                                                   gAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGaaa                                                                                                         >  1:805990/1‑250 (MQ=255)
                                                                                                                                   gAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGaaa                                                                                                         >  1:78362/1‑250 (MQ=255)
                                                                                                                                        aTGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATgcgc                                                                                                                             <  1:770895/225‑1 (MQ=255)
                                                                                                                                                cAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAAc                                                                                            <  1:558822/250‑1 (MQ=255)
                                                                                                                                                cAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAAc                                                                                            <  1:760615/250‑1 (MQ=255)
                                                                                                                                                cAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAAc                                                                                            <  1:278047/250‑1 (MQ=255)
                                                                                                                                                cAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAACg                                                                                           >  1:546197/1‑251 (MQ=255)
                                                                                                                                                 aGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCt                                                                                                                                                                    <  1:300730/177‑1 (MQ=255)
                                                                                                                                                 aGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAACGt                                                                                          >  1:836732/1‑251 (MQ=255)
                                                                                                                                                  gTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAAc                                                                                                                                                                                                     >  1:780022/1‑143 (MQ=255)
                                                                                                                                                  gTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATa                                                                                                                                                                                               <  1:496016/149‑1 (MQ=255)
                                                                                                                                                  gTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAACg                                                                                           <  1:210809/249‑1 (MQ=255)
                                                                                                                                                  gTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAACGTa                                                                                         >  1:654556/1‑251 (MQ=255)
                                                                                                                                                    tAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAACGTATc                                                                                       <  1:617875/251‑1 (MQ=255)
                                                                                                                                                              cccGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGAtt                                                                                                                                                                                                         >  1:815746/1‑127 (MQ=255)
                                                                                                                                                                  aGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAACGTATCAGCGAAACGGAAGa                                                                         >  1:85904/1‑251 (MQ=255)
                                                                                                                                                                    cTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCCCATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAg                                                                                                                                                                                           <  1:768142/135‑1 (MQ=255)
                                                                                                                                                                      tcaatttcaatAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAACGTATCAGCGAAACGGAAGATTTa                                                                     >  1:674353/1‑251 (MQ=255)
                                                                                                                                                                                   tCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCt                                                                                                                                                                                                                                   >  1:446751/1‑80 (MQ=255)
                                                                                                                                                                                   tCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACAGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAACGTATCAGCGAAACGGAAGATTTATCCCGCGATTTGt                                                        >  1:535957/1‑251 (MQ=255)
                                                                                                                                                                                       aaTCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAACGTATCAGCGAAACGGAAGATTTATCCCGCGATTTGTACg                                                     <  1:384789/250‑1 (MQ=255)
                                                                                                                                                                                           gtgtACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGc                                                                                                                                                                                          >  1:803357/1‑113 (MQ=255)
                                                                                                                                                                                           gtgtACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAAc                                                                                                                   >  1:334231/1‑184 (MQ=255)
                                                                                                                                                                                           gtgtACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAACGTATCAGCGAAACGGAAGATTTATCCCGCGATTTGTACGAGaaa                                                >  1:667919/1‑251 (MQ=255)
                                                                                                                                                                                                      ttAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAAtt                                                                                                                                                               >  1:99646/1‑129 (MQ=255)
                                                                                                                                                                                                             gCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAAc                                                                                            <  1:893150/189‑1 (MQ=255)
                                                                                                                                                                                                                   tCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAACGTATCAGCGAAACGGAAGATTTATCCCGCGATTTGTACGAGAAAATCGAAAAAGCATTACAGTAatat                        <  1:828439/251‑1 (MQ=255)
                                                                                                                                                                                                                   tCGCAGGGCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAACGTATCAGCGAAACGGAAGATTTATCCCGCGATTTGTACGAGAAAATCGAAAAAGCATTACAGTAatat                        <  1:476600/251‑1 (MQ=255)
                                                                                                                                                                                                                        gggCAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAACGTATCAGCGAAACGGAAGATTTATCCCGCGATTTGTACGAGAAAATCGAAAAAGCATTACAGTAATATCaaaa                   >  1:38128/1‑251 (MQ=255)
                                                                                                                                                                                                                           cAAAATTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAACGTATCAGCGAAACGGAAGATTTATCCCGCGATTTGTACGAGAAAATCGAAAAAGCATTACAGTAATATCAAAAAg                 <  1:897379/250‑1 (MQ=255)
                                                                                                                                                                                                                             aaaTTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAACGTATCAGCGAAACGGAAGATTTATCCCGCGATTTGTACGAGAAAATCGAAAAAGCATTACAg                              <  1:792241/235‑1 (MQ=255)
                                                                                                                                                                                                                               aTTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAACGTATCAGCGAAACGGAAGATTTATCCCGCGATTTGTACGAGAAAATc                                             <  1:211880/218‑1 (MQ=255)
                                                                                                                                                                                                                               aTTTAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAACGTATCAGCGAAACGGAAGATTTATCCCGCGATTTGTACGAGAAAATCGAAAAAGCATTACAGTaa                           >  1:470864/1‑236 (MQ=255)
                                                                                                                                                                                                                                tttAAAAGCCTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAACGTATCAGCGAAACGGAAGATTTATCCCGCGATTTGTACGAGAAAATCGAAAAAGCATTACAGTAATATCAAAAAGTGCGGt           >  1:506819/1‑251 (MQ=255)
                                                                                                                                                                                                                                         cTTCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAACGTATCAGCGAAACGGAAGATTTATCCCGCGATTTGTACGAGAAAATCGAAAAAGCATTACAGTAATATCAAAAAGTGCGGTTAATTTTGa  >  1:659173/1‑251 (MQ=255)
                                                                                                                                                                                                                                          ttCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAAc                                                                                            >  1:859373/1‑160 (MQ=255)
                                                                                                                                                                                                                                          ttCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAACGTATCAGCGAAACGGAAGATTTATCCCGCGATTTGTACGAGAAAATCGAAAAAGCATTACAg                              >  1:414760/1‑222 (MQ=255)
                                                                                                                                                                                                                                          ttCCATGCCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAGTTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAACGTATCAGCGAAACGGAAGATTTATCCCGCGATTTGTACGAGAAAATCGAAAAAGCATTACAGTAatat                        >  1:568550/1‑228 (MQ=255)
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                  
GCTGCAACGCAAGCCAAATTGCCTTGCCGCGATAATCTGTTGGCGGATTTTGAACAAAAATGGCAACAAGACGGCTTGGTGATGGACAAATGGTTTGCTTTGCAAGCCAGCCGCCCGGAAGAAAATGTGTTGAACAATGTGATGCAGTTAATGGAGCACCCGAGCTTCAATTTCAATAATCCGAATCGTGTACGTTCGTTAGTCGGCACATTCGCAGGGCAAAATTTAAAAGCCTTCCATGTCATTGACGGTTCCGGCTATCGTTTCTTAACGGATATTTTGATTAAACTGAATAAAAGCAACCCGCAAGTAGCTTCTCGCTTAATTGAACCGTTAATTCGTTTTGTCCGTTATGATGCGCAACGCCAAACGTTGATGAAACGCGCCTTAGAACGTATCAGCGAAACGGAAGATTTATCCCGCGATTTGTACGAGAAAATCGAAAAAGCATTACAGTAATATCAAAAAGTGCGGTTAATTTTGA  >  1/1259273‑1259756

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑