Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,243,304 T→C intergenic (+83724/+177633) unknown → / ← unknown tRNA‑Val‑GAC/tRNA‑Met‑CAT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,243,3040TC100.0% 228.4 / NA 79intergenic (+83724/+177633)unknown/unknowntRNA‑Val‑GAC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (43/36);  total (43/36)

ATGCTATTGAGTCCATTGAAGTCTTGCGAGGTCCGGCAGCAGCACGTTATGGTTCAGGCGCCATGGGCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAAGAAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCTAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAACATCACGCCGGATCAAAAATTAACCCTTGATGCCACATACAGCCGTCAAGGTAATATTTATAACGGCGATACGTAAAATAGCTCCGTTTTAGTCAGCCAAGCCA  >  1/1243063‑1243548
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                    
aTGCTATTGAGTCCATTGAAGTCTTGCGAGGTCCGGCAGCAGCACGTTATGGTTCAGGCGCCATGGGCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAg                                                                                                                                                                                                                                            >  1:202826/1‑251 (MQ=255)
   cTATTGAGTCCATTGAAGTCTTGCGAGGTCCGGCAGCAGCACGTTATGGTTCAGGCGCCATGGGCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCg                                                                                                                                                                                                                                         >  1:766032/1‑251 (MQ=255)
          gTCCATTGAAGTCTTGCGAGGTCCGGCAGCAGCACGTTATGGTTCAGGCGCCATGGGCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCAtt                                                                                                                                                                                                                                  >  1:814139/1‑251 (MQ=255)
          gTCCATTGAAGTCTTGCGAGGTCCGGCAGCAGCACGTTATGGTTCAGGCGCCATGGGCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCAtt                                                                                                                                                                                                                                  >  1:141629/1‑251 (MQ=255)
           tCCATTGAAGTCTTGCGAGGTCCGGCAG‑AGCACGTTATGGTTCAGGCGCCATGGGCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTgg                                                                                                                                                                                                                                <  1:462355/251‑1 (MQ=255)
            ccATTGAAGTCTTGCGAGGTCCGGCAGCAGCACGTTATGGTTCAGGCGCCATGGGCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTgg                                                                                                                                                                                                                                <  1:601890/251‑1 (MQ=255)
            ccATTGAAGTCTTGCGAGGTCCGGCAGCAGCACGTTATGGTTCAGGCGCCATGGGCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTgg                                                                                                                                                                                                                                >  1:517875/1‑251 (MQ=255)
              aTTGAAGTCTTGCGAGGTCCGGCAGCAGCACGTTATGGTTCAGGCGCCATGGGCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGat                                                                                                                                                                                                                              <  1:21366/251‑1 (MQ=255)
                    gTCTTGCGAGGTCCGGCAGCAGCACGTTATGGTTCAGGCGCCATGGGCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAAt                                                                                                                                                                                                                        >  1:602330/1‑251 (MQ=255)
                    gTCTTGCGAGGTCCGGCAGCAGCACGTTATGGTTCAGGCGCCATGGGCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAAt                                                                                                                                                                                                                        >  1:595925/1‑251 (MQ=255)
                     tCTTGCGAGGTCCGGCAGCAGCACGTTATGGTTCAGGCGCCATGGGCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTaa                                                                                                                                                                                                                         <  1:86276/249‑1 (MQ=255)
                     tCTTGCGAGGTCCGGCAGCAGCACGTTATGGTTCAGGCGCCATGGGCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAAt                                                                                                                                                                                                                        <  1:865445/250‑1 (MQ=255)
                      cTTGCGAGGTCCGGCAGCAGCACGTTATGGTTCAGGCGCCATGGGCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTc                                                                                                                                                                                                                      <  1:78332/251‑1 (MQ=255)
                              gTCCGGCAGCAGCACGTTATGGTTCAGGCGCCATGGGCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTc                                                                                                                                                                                                                      >  1:184888/1‑243 (MQ=255)
                                          caCGTTATGGTTCAGGCGCCATGGGCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGAcc                                                                                                                                                                                                   <  1:836679/250‑1 (MQ=255)
                                              ttATGGTTCAGGCGCCATGGGCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCaataa                                                                                                                                                                                              >  1:467465/1‑251 (MQ=255)
                                              ttATGGTTCAGGCGCCATGGGCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCaataa                                                                                                                                                                                              >  1:746188/1‑251 (MQ=255)
                                                  ggTTCAGGCGCCATGGGCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGCTTAAAGATGTTTTAGGCTTCCGTTTAAACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCaataataat                                                                                                                                                                                          >  1:574649/1‑251 (MQ=255)
                                                   gTTCAGGCGCCATGGGCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATg                                                                                                                                                                                         >  1:594185/1‑251 (MQ=255)
                                                   gTTCAGGCGCCATGGGCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATg                                                                                                                                                                                         >  1:311147/1‑251 (MQ=255)
                                                   gTTCAGGCGCCATGGGCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATg                                                                                                                                                                                         >  1:105970/1‑251 (MQ=255)
                                                    ttCAGGCGCCATGGGCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCATAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATgc                                                                                                                                                                                        <  1:198044/251‑1 (MQ=255)
                                                            ccATGGGCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAAt                                                                                                                                                                                                                        >  1:325319/1‑211 (MQ=255)
                                                                 ggCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGa                                                                                                                                                                            >  1:168248/1‑250 (MQ=255)
                                                                  gCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGac                                                                                                                                                                           <  1:273002/250‑1 (MQ=255)
                                                                  gCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGac                                                                                                                                                                           <  1:2922/250‑1 (MQ=255)
                                                                  gCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGac                                                                                                                                                                           <  1:229576/250‑1 (MQ=255)
                                                                  gCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGac                                                                                                                                                                           <  1:336332/250‑1 (MQ=255)
                                                                       gtggtgAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAacac                                                                                                                                                                      <  1:55905/250‑1 (MQ=255)
                                                                       gtggtgAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAacac                                                                                                                                                                      >  1:764819/1‑250 (MQ=255)
                                                                             aaCATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTa                                                                                                                                                                <  1:79779/250‑1 (MQ=255)
                                                                               cATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAAtt                                                                                                                                                                                                                       >  1:462464/1‑193 (MQ=255)
                                                                               cATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTc                                                                                                                                                                                                                      >  1:495539/1‑194 (MQ=255)
                                                                               cATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGAc                                                                                                                                                                                                    <  1:359222/212‑1 (MQ=255)
                                                                               cATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATg                                                                                                                                                              >  1:815010/1‑250 (MQ=255)
                                                                                aTTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGcc                                                                                                                                                            <  1:31373/251‑1 (MQ=255)
                                                                                 ttAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGac                                                                                                                                                                           >  1:816797/1‑235 (MQ=255)
                                                                                       ccAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGata                                                                                                                                                                                                                             >  1:567459/1‑179 (MQ=255)
                                                                                       ccAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAAt                                                                                                                                                                                                                        >  1:116480/1‑184 (MQ=255)
                                                                                             cACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAgg                                                                                                                                                 <  1:203177/249‑1 (MQ=255)
                                                                                             cACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAgg                                                                                                                                                 <  1:884460/249‑1 (MQ=255)
                                                                                                           tatCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGac                                                                                                                                                                           <  1:760426/209‑1 (MQ=255)
                                                                                                                     gTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGcc                                                                                                                        >  1:772290/1‑250 (MQ=255)
                                                                                                                             cTATTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCagttagtt                                                                                                               >  1:388079/1‑251 (MQ=255)
                                                                                                                               aTTTACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTg                                                                                                             >  1:120135/1‑251 (MQ=255)
                                                                                                                                 ttACCGAGCAACCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGAc                                                                                                                                                                                                    <  1:659556/162‑1 (MQ=255)
                                                                                                                                          aaCCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAAc                                                                                                         <  1:124174/244‑1 (MQ=255)
                                                                                                                                           aCCGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAACATCACGc                                                                                                  >  1:519073/1‑250 (MQ=255)
                                                                                                                                            ccGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCg                                                                                                                                     >  1:191416/1‑214 (MQ=255)
                                                                                                                                            ccGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGc                                                                                                                            >  1:716085/1‑223 (MQ=255)
                                                                                                                                            ccGGAAGACAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAACATCACGCCg                                                                                                >  1:477890/1‑251 (MQ=255)
                                                                                                                                                    cAGCAAA‑AAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTaa                                                                                                                                                                                                                         <  1:244913/122‑1 (MQ=255)
                                                                                                                                                            aagGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAACATCACGCCGGATCAAAAATTAAcc                                                                                 <  1:21338/251‑1 (MQ=255)
                                                                                                                                                                ccATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAACATCAc                                                                                                    >  1:739309/1‑228 (MQ=255)
                                                                                                                                                                 cATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCg                                                                                                                                     >  1:576863/1‑194 (MQ=255)
                                                                                                                                                                  aTACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAACATCACGCCGGATCAAAAATTAACCCTTGAt                                                                           >  1:516823/1‑251 (MQ=255)
                                                                                                                                                                  aTACC‑ACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAACATCACGCCGGATCAAAAATTAACCCTTGATg                                                                          <  1:571566/251‑1 (MQ=255)
                                                                                                                                                                   tACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAACATCACGCCGGATCAAAAATTAACCCTTGATg                                                                          >  1:35685/1‑251 (MQ=255)
                                                                                                                                                                         ccGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAACATCACGCCGGATCAAAAATTAACCCTTGATGCCACAt                                                                    >  1:671833/1‑251 (MQ=255)
                                                                                                                                                                         ccGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAACATCACGCCGGATCAAAAATTAACCCTTGATGCCACAt                                                                    >  1:831844/1‑251 (MQ=255)
                                                                                                                                                                              tGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAACATCACGCCGGATCAAAAATTAACCCTTGATGCCACATACAGc                                                               <  1:329632/251‑1 (MQ=255)
                                                                                                                                                                              tGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAACATCACGCCGGATCAAAAATTAACCCTTGATGCCACATACAGc                                                               <  1:115648/251‑1 (MQ=255)
                                                                                                                                                                                ggTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGAtg                                                                                                                                <  1:318660/184‑1 (MQ=255)
                                                                                                                                                                                      aaTTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGccc                                                                                                                       <  1:519391/187‑1 (MQ=255)
                                                                                                                                                                                      aaTTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAACATCACGCCGGATCAAAAATTAACCCTTGATGCCACATa                                                                   >  1:689701/1‑239 (MQ=255)
                                                                                                                                                                                              cGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAACATCACGCCGGATCAAAAATTAACCCTTGATGCCACATACAGCCGTCAAGGTAatat                                                 <  1:238947/249‑1 (MQ=255)
                                                                                                                                                                                              cGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAACATCACGCCGGATCAAAAATTAACCCTTGATGCCACATACAGCCGTCAAGGTAatat                                                 <  1:268536/249‑1 (MQ=255)
                                                                                                                                                                                                    gTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTaa                                                                                                                                                                                                                         >  1:214365/1‑75 (MQ=255)
                                                                                                                                                                                                       gATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAACATCACGCCGGATCAAAAATTAACCCTTGATGCCACATACAGCCGTCAAGGTAATATTTATAACGGCg                                      >  1:8939/1‑251 (MQ=255)
                                                                                                                                                                                                                 gTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGccc                                                                                                                       <  1:728941/160‑1 (MQ=255)
                                                                                                                                                                                                                 gTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGccc                                                                                                                       <  1:309446/160‑1 (MQ=255)
                                                                                                                                                                                                                 gTTTTAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAACATCACGCCGGATCAAAAATTAACCCTTGATGCCACATACAGCCGTCAAGGTAATATTTATAACGGCGATACGTaaaa                            >  1:274004/1‑251 (MQ=255)
                                                                                                                                                                                                                  ttttAGGCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAACATCACGCCGGATCAAAAATTAACCCTTGATGCCACATACAGCCGTCAAGGTAATATTTATAACGGCGATACGTAAAAt                           <  1:277168/251‑1 (MQ=255)
                                                                                                                                                                                                                        gCTTCCGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAACATCACGCCGGATCAAAAATTAACCCTTGATGCCACATACAGCCGTCAAGGTAATATTTATAACGGCGATACGTAAAATAGCTc                      <  1:840849/250‑1 (MQ=255)
                                                                                                                                                                                                                            ccGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAACATCACGCCGGATCAAAAATTAACCCTTGATGCCACATACAGCCGTCAAGGTAATATTTATAACGGCGATACGTAAAATAGCTCCGttt                 >  1:725421/1‑251 (MQ=255)
                                                                                                                                                                                                                             cGTTTATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAACATCACGCCGGATCAAAAATTAACCCTTGATGCCACATACAGCCGTCAAGGTAATATTTATAACGGCGATACGTAAAATAGCTCCGtttt                >  1:344742/1‑251 (MQ=255)
                                                                                                                                                                                                                                ttATACGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAACATCACGCCGGATCAAAAATTAACCCTTGATGCCACATAc                                                                  <  1:386294/198‑1 (MQ=255)
                                                                                                                                                                                                                                   taCGGCAACATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAACATCACGCCGGATCAAAAATTAACCCTTGATGCCACATACAGCCGTCAAGGTAATATTtat                                             >  1:113896/1‑216 (MQ=255)
                                                                                                                                                                                                                                           cATTGCCAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAACATCACGCCGGATCAAAAATTAACCCTTGATGCCACATACAGCCGTCAAGGTAATATTTATAACGGCGATACGTAAAATAGCTCCGTTTTAGTCagccaagcca  <  1:870854/251‑1 (MQ=255)
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                    
ATGCTATTGAGTCCATTGAAGTCTTGCGAGGTCCGGCAGCAGCACGTTATGGTTCAGGCGCCATGGGCGGGGTGGTGAACATTAAAACCAAAGCACCAACCGCAGAATATCACGGCAGTTTAAATCTATTTACCGAGCAACCGGAAGACAGCAAAGAAGGCCATACCAACCGTCTGGGTTTTAATTTCAGCGGTCCGTTGATTAAAGATGTTTTAGGCTTCCGTTTATACGGCAACATTGCTAAAACAAAAGCCGATGCATTGGATATTAATTCCGCTGAAGATGCCGGGACCAATAATAATGCGGCGACACAAGACAACACCCGCTATGCCGGTCGTGAAGGCGTGCGTAATCGTGATGTGGCAGCCCAGTTAGTTTGGAACATCACGCCGGATCAAAAATTAACCCTTGATGCCACATACAGCCGTCAAGGTAATATTTATAACGGCGATACGTAAAATAGCTCCGTTTTAGTCAGCCAAGCCA  >  1/1243063‑1243548

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑