Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,231,573 G→T intergenic (+71993/+189364) unknown → / ← unknown tRNA‑Val‑GAC/tRNA‑Met‑CAT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,231,5730GT100.0% 150.2 / NA 56intergenic (+71993/+189364)unknown/unknowntRNA‑Val‑GAC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (26/30);  total (26/30)

TTCAGAGCGGATGCCGGTTCGGCGGATTTGGTGGGCAAACAAAAAATGATTGATGCGTTAAAA‑CGTCTGCAAAGTTT‑GCATGAACCGCAAGAATTAGAAGGCTCCGCCTTAGCGGCATTTGCCATTAACGGTAAAC‑GTGGTGGCGGTTTGAAAGAGTTACTTTT‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATAGAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTGAAGAAACGAGAGAGCGAGTTTGTAAATAATTTTTTCGGGCGTTTTTTATCGGTATCCTTTTCTACTCACGAATAATTTGCGTAAAACGTGATAAATTGCGTGAT  >  1/1231326‑1231818
                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                     
ttCAGAGCGGATGCCGTGTCGGCGGGTGTGGTGGGCAAACAAAAAATGATAGATGCGTAAAAG‑CGTCGGCAAGGTTT‑GCAGTAACCGCAGAAATGAGAAGGCTCCGCCTTAGCTGCATTTGCCATTAACGG‑AAACGGTGGGGGGGGTTAAAAAGAGTTACTTTT‑AAGCCGCCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAgg                                                                                                                                                                                                                                                    <  1:835098/251‑1 (MQ=255)
ttCAGAGCGGATGCCGGTTGGGCGGTTTTGGGGGGAAAACAAAAAATGATTGATGCGTAAAAG‑CGTCTGCAAAGTTT‑GCATAAGCCGCAAGAATTAGAAGGCTCGGCCTTAGCTGCTTTTGCCATTAAGGGTAAAC‑GTGGTGGCGGTTTGAAAGATTTACTTTT‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAgg                                                                                                                                                                                                                                                    <  1:293182/251‑1 (MQ=255)
ttCAGAGCGGATGCCGGTTCGGCGGATTTGGTGGGCAAACAAAAAATGATTGATGCGTTAAAA‑CGTCTGCAAAGTTT‑GCATGAACCGCAAGAATTAGAAGGCTCCGCCTTAGCTGCTTTTGCCATTAACGGTAAAG‑GTGGTGGGGTTTTGAAAGAGTTTCTTTT‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAgg                                                                                                                                                                                                                                                    <  1:104386/251‑1 (MQ=255)
     ggCGGATGCCGGTGCGGGGGTTTTGGTGGGAAAAAAAAAAATGATTGATGTTTAAAAA‑CGTCTGCAAATTTT‑GCATGAACCGCAAGAATTAGAAGGCTCCGCTTTAGCTGCATTGGCTATTAAGGGAAAAG‑GTGGTGGGGTTTTGAAAGAGTTACTTTA‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCt                                                                                                                                                                                                                                                  <  1:774766/247‑1 (MQ=255)
         gATGCCGGTTCGGCGGATTTGGTGGGCAAACAAAAAATGATTGATGCGTTAAAA‑CGTCTGCAAAGTTT‑GCATGAACCGCAAGAATTAGAAGGCTCCGCCTTAGCTGCATTTGCCATTAACGGTAAAC‑GTGGTGGCGGTTTGAAAGAGTTACTTTT‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAg                                                                                                                                                                                                                                           >  1:886565/1‑251 (MQ=255)
          atgcgggttggggggttttGGTGGGAAAAAAAAAAATGATTGAGGCGTAAAAC‑CGTCTG‑AAAGTTTGGCATGACCCGCAAGAATTAGAAGGCTCCGCCTGGGCTGTTTTTGCCATTAACGTTAAAT‑GTGGTGGCGGTTTAAAAGATTTATTTTT‑AAGCCCCCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAg                                                                                                                                                                                                                                           <  1:190691/234‑1 (MQ=255)
                      gggtttggggggaaaaaaaaaaaaTGATTGGTGCGTAAAAG‑CGTCTGAAAAGTTT‑GCAAGAACCGAAAAAATAAGAAGGCTCCGCTTTAGCTGCTTTTGCCATTAACGGTAAAC‑GTGGTGGGGGTTTGAAAGAGTTATTTTA‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTAtttttt                                                                                                                                                                                                                               <  1:124449/232‑1 (MQ=255)
                        ttttgggggggaaaaaaaaaaaGGATTGATG‑TTTAAAACCGTCTGAAAAGTTT‑GCAGGAACCGAAAGAATTAGAGGGCCCTGCCTTAGCTGCTTTTGCCATTAAGGGAAAAG‑GTGGGGGCGGTTTAAAAGAGTTTTTTTT‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTg                                                                                                                                                                                                                             <  1:427274/234‑1 (MQ=255)
                        gATTTGGTGGGAAAAAAAAAAAGGATTGATGCTTAAAAA‑CGTCTGAAAATTTG‑GCATGAACCGAAAGAATAAGAGGGCTCCGCCTTAGCTGCATTTGCCATTAAGGGTAAAC‑GTGGTGGCGTTTTAAAAGATTTATTTTT‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTg                                                                                                                                                                                                                             <  1:50212/250‑1 (MQ=255)
                                      acaaaAAATGATTGATGCGTAAAAC‑CTTCTGAAATGTTT‑GCAGGACCCGAAAGAATTAGAAGCCCCCGCTTTAGTTGCTTTTGCCATTAAGGGAAAGG‑GTGGGGGCGTTTAGAAAGATTTTTTTTT‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGc                                                                                                                                                                                                              <  1:900967/251‑1 (MQ=255)
                                       aaaaaaaTGATTGATGCTTTAAAC‑CGTCTGAAAAGTTT‑GCATGACCCGAAAGAATTAGAAGCCTCCGCTTTAGCTGCTTTTGCCATTAACGGTAAAC‑GTGGTGGCGTTTTAAAAGAGTTACTTTT‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAgg                                                                                                                                                                                                                                                    <  1:289421/211‑1 (MQ=255)
                                             ataattaatgatttAAAA‑CTTCTGCAAGTTTT‑GCATAAGCCGCAAGAATAAGAAGCCTCCACTTAAGCTGCATTTGCAATTAACGGAAAGC‑GTGGTGGCGGTTTGAAA‑AATTTCTTTTAAACCCCCCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAg                                                                                                                                                                                                       <  1:273689/239‑1 (MQ=255)
                                             aTGATTGATGCGTAAAAC‑CGTCTGAAATGTTT‑GCATGACCCGAAAGAATAAGAGGCCTCCTCCTTAGCTTCTTTTGCCATTACGGGTAAAC‑GTGGGGGCGTTTTAAAAGATTTTTTTTT‑AACCCATCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAg                                                                                                                                                                                                       <  1:169460/251‑1 (MQ=255)
                                              tgattgatGCGTTAAAA‑CGTCTGCAAAGTTT‑GCATGAACCGCAAGAATTAGAAGGCTCCGCCTTAGCTGCATTTGCCATTAACGGTAAAC‑GTGGTGGCGGTTTGAAAGAGTTACTTTT‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGa                                                                                                                                                                                                      >  1:576383/1‑251 (MQ=255)
                                                        gTTAAAA‑CGTCTGCAAAGTTT‑GCATGAACCGCAAGAATTAGAAGGCTCCGCCTTAGCTGCATTTGCCATTAACGGTAAAC‑GTGGTGGCGGTTTGAAAGAGTTACTTTT‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAg                                                                                                                                                                                                       >  1:862925/1‑240 (MQ=255)
                                                        gTTAAAA‑CGTCTGCAAAGTTT‑GCATGAACCGCAAGAATTAGAAGGCTCCGCCTTAGCTGCATTTGCCATTAACGGTAAAC‑GTGGTGGCGGTTTGAAAGAGTTACTTTT‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCAc                                                                                                                                                                                              >  1:279186/1‑249 (MQ=255)
                                                           aaaa‑CTTCTGCAAAGTTT‑GCATAACCCGCAAGAATTAGAGGGCTCCGCTTTAGCTGCATTTGCCATTAACGGTAACC‑GTGGTGGCTTTTTGAAAGATTTGTTTTT‑AAGCCCCCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTaaaa                                                                                                                                                                                         <  1:236676/251‑1 (MQ=255)
                                                                               gcaggacccgaaaGAATTAGAGGGCCCCGCCTTGGCTGCTTTTGCCATAAACGGTAAGC‑GTGGTGGCGGTTTGAAAGAGTTTTTTTT‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGc                                                                                                                                                                                                                                                   <  1:356441/164‑1 (MQ=255)
                                                                                            gAATTAGAAGGCTCCGCCTTAGCTGCATTTGCCATTAACGGTAAAC‑GTGGTGGCGGTTTGAAAGAGTTACTTTT‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAgg                                                                                                                                                                                                                                                    >  1:207230/1‑161 (MQ=255)
                                                                                             aaTTAGAAGGCTCCGCCTTAGCTGCATTTGCCATTAACGGTAAAC‑GTGGTGGCGGTTTGAAAGAGTTACTTTT‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTc                                                                                                                                                                                                   >  1:461182/1‑209 (MQ=255)
                                                                                                      gCTCCGCCTTAGCTGCATTTGCCATTAACGGTAAAC‑GTGGTGGCGGTTTGAAAGAGTTACTTTT‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGtt                                                                                                                                                >  1:277652/1‑251 (MQ=255)
                                                                                                           gCCTTAGCTGCATTTGCCATTAACGGTAAAC‑GTGGTGGCGGTTTGAAAGAGTTACTTTT‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAgg                                                                                                                                                                                                                                                    >  1:155885/1‑146 (MQ=255)
                                                                                                            ccTTAGCTGCTTTTGCCATTAACGGTAAAC‑GTGGTGGCGGTTTGAAAGAGTTTTTTTT‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAg                                                                                                                                                                      <  1:180394/223‑1 (MQ=255)
                                                                                                               tAGCTGCATTTGCCATTAACGGTAAAC‑GTGGTGGGGGTTTGAAAGATTTACTTTT‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACg                                                                                                                                       <  1:38840/251‑1 (MQ=255)
                                                                                                                    gCATTTGCCATTAACGGTAAAC‑GTGGTGGCGGTTTGAAAGAGTTACTTTT‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAg                                                                                                                                                                      >  1:353590/1‑215 (MQ=255)
                                                                                                                                   gggaaaagggggtggggtttaaaaaGATTTATTTTA‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTg                                                                                                                                           <  1:414935/206‑1 (MQ=255)
                                                                                                                                    gTAAAC‑GTGGTGGCGGTTTGAAAGAGTTACTTTT‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGt                                                                                                                  >  1:750890/1‑251 (MQ=255)
                                                                                                                                    gTAAAC‑GTGGTGGCGGTTTGAAAGAGTTACTTTT‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGt                                                                                                                  >  1:896619/1‑251 (MQ=255)
                                                                                                                                        aC‑GTGGTGGCGGTTTGAAAGAGTTACTTTT‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAgg                                                                                                              >  1:617287/1‑251 (MQ=255)
                                                                                                                                            gggtgggggttgaaaaatgttcttttt‑ACGCCGCCAGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAgggg                                                                                                            <  1:734222/227‑1 (MQ=255)
                                                                                                                                                 gcggttggaaggatttcttttt‑AACCCCCCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTgaag                                                                                                       <  1:259024/232‑1 (MQ=255)
                                                                                                                                                  gtgttttaaaggtgtttctttaaacccACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTgaag                                                                                                       <  1:878506/225‑1 (MQ=255)
                                                                                                                                                     gttgaaaagattttttttaaacccACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTGAAGaaa                                                                                                    <  1:409642/228‑1 (MQ=255)
                                                                                                                                                            gagTTACTTTT‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTGAAGAAACgagag                                                                                              >  1:732444/1‑248 (MQ=255)
                                                                                                                                                                  cTTTT‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTGAAGAAACGAGAGAGCGAGttt                                                                                     >  1:677098/1‑251 (MQ=255)
                                                                                                                                                                    ttt‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTGAAGAAACGAGAGAGCGAGTTTGt                                                                                   >  1:108651/1‑251 (MQ=255)
                                                                                                                                                                       aaaGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTGAAGAAACGAGAGAGCGAGTTTGTaa                                                                                 <  1:871874/250‑1 (MQ=255)
                                                                                                                                                                                        gAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTGAAGAAACGAGAGAGCGAGTTTGTAAATAATTTTTTCGGGCg                                                                 <  1:419491/250‑1 (MQ=255)
                                                                                                                                                                                               gTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTGAAGAAACGAGAGAGCGAGTTTGTAAATAATTTTTTCGGGCGTTTTTTAt                                                         >  1:1946/1‑251 (MQ=255)
                                                                                                                                                                                                       gCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTGAAGAAACGAGAGAGCGAGTTTGTaa                                                                                 <  1:682633/219‑1 (MQ=255)
                                                                                                                                                                                                       gCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTGAAGAAACGAGAGAGCGAGTTTGTAAATAATTTTTTCGGGCGTTTTTTATCGGTATc                                                  >  1:161572/1‑250 (MQ=255)
                                                                                                                                                                                                                   ttGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTGAAGAAACGAGAGAGCGAGTTTGTAAATAATTTTTTCGGGCGTTTTTTATCGGTATCCTTTTCTAc                                         <  1:29848/247‑1 (MQ=255)
                                                                                                                                                                                                                           gTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTGAAGAAACGAGAGAGCGAGTTTGTaa                                                                                 <  1:542131/199‑1 (MQ=255)
                                                                                                                                                                                                                           gTTATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTGAAGAAACGAGAGAGCGAGTTTGTAaat                                                                               >  1:249676/1‑201 (MQ=255)
                                                                                                                                                                                                                            ttATAAAATTTCATTTTACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTGAAGAAACGAGAGAGCGAGTTTGTAAATAATTTTTTCGGGCGTTTTTTATCGGTATCCTTTTCTACTCACGaataa                               <  1:707737/248‑1 (MQ=255)
                                                                                                                                                                                                                                           ttACCGATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTGAAGAAACGAGAGAGCGAGTTTGTAAATAATTTTTTCGGGCGTTTTTTATCGGTATCCTTTTCTAc                                         <  1:73238/223‑1 (MQ=255)
                                                                                                                                                                                                                                                gATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTGAAGAAACGAGAGAGCGAGTTTGTAAATAATTTTTTCGGGCGTTTTTTATCGGTATCCTTTTCTACTCACGAATAATTTGCGTAAAACGTGATAAATTg        >  1:880956/1‑251 (MQ=255)
                                                                                                                                                                                                                                                gATACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTGAAGAAACGAGAGAGCGAGTTTGTAAATAATTTTTTCGGGCGTTTTTTATCGGTATCCTTTTCTACTCACGAATAATTTGCGTAAAACGTGATAAATTg        >  1:212668/1‑251 (MQ=255)
                                                                                                                                                                                                                                                 aTACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTGAAGAAACGAGAGAGCGAATTTGTAAATAATTTTTTCGGGCGTTTTTTATCGGTATCCTTTTCTACTCACGAATAATTTGCGTAAAACGTGATAAATTg        >  1:433416/1‑250 (MQ=255)
                                                                                                                                                                                                                                                 aTACGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTGAAGAAACGAGAGAGCGAATTTGTAAATAATTTTTTCGGGCGTTTTTTATCGGTATCCTTTTCTACTCACGAATAATTTGCGTAAAACGTGATAAATTg        >  1:423772/1‑250 (MQ=255)
                                                                                                                                                                                                                                                   aCGGAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTGAAGAAACGAGAGAGCGAGTTTGTAAATAATTTTTTCGGGCGTTTTTTATc                                                        <  1:757642/200‑1 (MQ=255)
                                                                                                                                                                                                                                                      gAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTgg                                                                                                                                   <  1:751755/122‑1 (MQ=255)
                                                                                                                                                                                                                                                      gAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTGAAGAAACgagag                                                                                              >  1:556519/1‑159 (MQ=255)
                                                                                                                                                                                                                                                      gAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTGAAGAAACGAGAGAGCGAGTTTGTAAATAATTTTTTCGGGCGTTTTTTATCGGTATCCTTTTCTACTCACGAATAATTTGCGTAAAACGTGATAAATTGCGTGAt  >  1:619421/1‑251 (MQ=255)
                                                                                                                                                                                                                                                      gAATATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTGAAGAAACGAGAGAGCGAGTTTGTAAATAATTTTTTCGGGCGTTTTTTATCGGTATCCTTTTCTACTCACGAATAATTTGCGTAAAACGTGATAAATTGCGTGAt  >  1:478458/1‑251 (MQ=255)
                                                                                                                                                                                                                                                       aaTATAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTGAAGAAACGAGAGAGCGAGTTTGTAAATAATTTTTTCGGGCGTTTTTTATCGGTATCCTTTTCTACTCACGAATAATTTGCGTAAAAc                   >  1:158237/1‑233 (MQ=255)
                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                     
TTCAGAGCGGATGCCGGTTCGGCGGATTTGGTGGGCAAACAAAAAATGATTGATGCGTTAAAA‑CGTCTGCAAAGTTT‑GCATGAACCGCAAGAATTAGAAGGCTCCGCCTTAGCGGCATTTGCCATTAACGGTAAAC‑GTGGTGGCGGTTTGAAAGAGTTACTTTT‑AAGCCACCCGCCGTTGGAAAAACGTATTGAAGCGTTGCAACAGTTGCGTCAGTTATAAAATTTCATTTTACCGATACGGAATAGAGGCTTTTGAAGCCTCTATTTTTTTGTCTATGAAAAATAGCTTAATAGATTCAGCACTAAAATTTCCTGCAGGACAAAAAGTGCGGTCACAAAAAACAACGTTTTTTGAACGTTGGCTTTTCCAACCGCCCGTTAGGGGTGAAGAAACGAGAGAGCGAGTTTGTAAATAATTTTTTCGGGCGTTTTTTATCGGTATCCTTTTCTACTCACGAATAATTTGCGTAAAACGTGATAAATTGCGTGAT  >  1/1231326‑1231818

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑