| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,228,391 | A→G | intergenic (+68811/+192546) | unknown → / ← unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,228,391 | 0 | A | G | 100.0% | 227.0 / NA | 83 | intergenic (+68811/+192546) | unknown/unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (44/39); total (44/39) | |||||||||||
CCCAAACAGGAAATTTTGATGGCGGCATTGACGAGTAATAAACTTTTTAAACTGTTTTTGCTGGAAATTTCGGCGGATTCTAAAAGCAGGGTGTTCGGTTTGTTTTCACATAATGTGGCGAAAATTGCGGTAGGATCGCTGTGATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTAAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGCGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATCATGTCGGACATTTCACGAAACGCCCCTTTGCCACCGCCTAAACCCAAGACGTAAT > 1/1228145‑1228636 | cccAAACAGGAAATTTTGATGGCGGCATTGACGAGTAATAAACTTTTTAAACTGTTTTTGCTGGAAATTTCGGCGGATTCTAAAAGCAGGGTGTTCGGTTTGTTTTCACATAATGTGGCGAAAATTGCGGTAGGATCGCTGTGATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAg < 1:110816/251‑1 (MQ=255) gAAATTTTGATGGCGGCATTGACGAGTAATAAACTTTTTAAACTGTTTTTGCTGGAAATTTCGGCGGATTCTAAAAGCAGGGTGTTCGGTTTGTTTTCACATAATGTGGCGAAAATTGCGGTAGGATCGCTGTGATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGa < 1:123742/250‑1 (MQ=255) tGACGAGTAATAAACTTTTTAAACTGTTTTTGCTGGAAATTTCGGCGGATTCTAAAAGCAGGGTGTTCGGTTTGTTTTCACATAATGTGGCGAAAATTGCGGTAGGATCGCTGTGATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAgg < 1:84081/251‑1 (MQ=255) gACGAGTAATAAACTTTTTAAACTGTTTTTGCTGGAAATTTCGGCGGATTCTAAAAGCAGGGCGTTCGGTTTGTTTTCACATAATGTGGCGATAATTGCGGTAGGATCGCTGTGATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTCTTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGt > 1:399954/1‑251 (MQ=255) taataaACTTTTTAAACTGTTTTTGCTGGAAATTTCGGCGGATTCTAAAAGCAGGGTGTTCGGTTTGTTTTCACATAATGTGGCGAAAATTGCGGTAGGATCGCTGTGATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATgg < 1:758588/251‑1 (MQ=255) aaaCTTTTTAAACTGTTTTTGCTGGAAATTTCGGCGGATTCTAAAAGCAGGGTGTTCGGTTTGTTTTCACATAATGTGGCGAAAATTGCGGTAGGATCGCTGTGATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAAt < 1:457979/251‑1 (MQ=255) cTTTTTAAACTGTTTTTGCTGGAAATTTCGGCGGATTCTAAAAGCAGGGTGTTCGGTTTGTTTTCACATAATGTGGCGAAAATTGCGGTAGGATCGCTGTGATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGt < 1:453167/251‑1 (MQ=255) ttttAATCTGTTTTTGCTGGAAATTTCGGCGGATTCTAAAAGCAGGGTGTTCGGTTTGTTTTCACATAATGTGGCGAAAATTGCGGTAGGATCGCTGTGATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCCCTATTAAACTAGTACAAGGGGTGAAATTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTg < 1:186752/251‑1 (MQ=255) gTTTTTGCTGGAAATTTCGGCGGATTCTAAAAGCAGGGTGTTCGGTTTGTTTTCACATAATGTGGCGAAAATTGCGGTAGGATCGCTGTGATAAGGGACAATTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAgggg < 1:210973/247‑1 (MQ=255) aaaaGCAGGGTGTTCGGTTTGTTTTCACATAATGTGGCGAAAATTGCGGTAGGATCGCTGTGATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAg < 1:701032/251‑1 (MQ=255) aaGCAGGGTGTTCGGTTTGTTTTCACATAATGTGGCGAAAATTGCGGTAGGATCGCTGTGATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTg < 1:741465/251‑1 (MQ=255) cGGTTTGTTTTCACATAATGTGGCGAAAATTGCGGTAGGATCGCTGTGATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAg > 1:683024/1‑237 (MQ=255) ttgtttTCACATAATGTGGCGAAAATTGCGGTAGGATCGCTGTGATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAg > 1:551345/1‑251 (MQ=255) gtttTCACATAATGTGGCGAAAATTGCGGTAGGATCGCTGTGATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTc > 1:356785/1‑239 (MQ=255) caTAATGTGGCGAAAATTGCGGTAGGATCGCTGTGATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTAc < 1:713018/251‑1 (MQ=255) caTAATGTGGCGAAAATTGCGGTAGGATCGCTGTGATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTAc < 1:708449/251‑1 (MQ=255) ggCGAAAATTGCGGTAGGATCGCTGTGATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCAt > 1:387789/1‑251 (MQ=255) ggCGAAAATTGCGGTAGGATCGCTGTGATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCAt > 1:314675/1‑251 (MQ=255) aaaTTGCGGTAGGATCGCTGTGATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAAttt > 1:249034/1‑149 (MQ=255) ggATCGCTGTGATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTAc > 1:554890/1‑227 (MQ=255) ggATCGCTGTGATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGc > 1:122025/1‑244 (MQ=255) tCGCTGTGATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCaaa < 1:696313/251‑1 (MQ=255) gtgATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAgggg > 1:494300/1‑160 (MQ=255) gtgATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGt > 1:138476/1‑166 (MQ=255) gtgATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATc > 1:852667/1‑250 (MQ=255) gATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCtt > 1:266673/1‑251 (MQ=255) aaGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTtgtg < 1:37539/251‑1 (MQ=255) gCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTaaa > 1:411284/1‑251 (MQ=255) cGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAAt < 1:572572/251‑1 (MQ=255) cGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAAt < 1:172815/251‑1 (MQ=255) cGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAAt < 1:361191/251‑1 (MQ=255) tAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATg < 1:539439/250‑1 (MQ=255) gAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTg > 1:310414/1‑250 (MQ=255) tAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGt < 1:821475/108‑1 (MQ=255) aaaGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTgg > 1:636868/1‑251 (MQ=255) aaGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAggg > 1:704399/1‑135 (MQ=255) ggaCATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAATCTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATgg > 1:578791/1‑104 (MQ=255) ggaCATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGTGCGTTTaa > 1:256396/1‑251 (MQ=255) ggaCATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCg < 1:19422/246‑1 (MQ=255) gaCATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTa < 1:248048/249‑1 (MQ=255) tctcATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTaa < 1:653831/219‑1 (MQ=255) ctcATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTAc < 1:787104/170‑1 (MQ=255) cATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATCATGt > 1:558337/1‑250 (MQ=255) tttCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGc > 1:56222/1‑209 (MQ=255) tCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTgc < 1:432884/127‑1 (MQ=255) tCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATg > 1:35434/1‑215 (MQ=255) tCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATCATGTCGGAc < 1:269152/251‑1 (MQ=255) cTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATgg > 1:229963/1‑89 (MQ=255) aaaGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATCATGTCGGACATTTCAc < 1:895692/251‑1 (MQ=255) gAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATCATGTCGGACATTTCACGAAACg > 1:15310/1‑250 (MQ=255) ataaatTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATCATGTCGGACATTTCACGAAACGcccc < 1:511535/251‑1 (MQ=255) atTTTGCACTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATCATGTCGGACATTTCACGAAACGCCCCTTTg < 1:167690/251‑1 (MQ=255) cTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAgggg < 1:734955/76‑1 (MQ=255) cTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTAc < 1:59467/135‑1 (MQ=255) cTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATcc > 1:128507/1‑167 (MQ=255) cTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAAt < 1:324843/185‑1 (MQ=255) cTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATg > 1:195378/1‑186 (MQ=255) cTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAg > 1:64604/1‑210 (MQ=255) cTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGAt > 1:101537/1‑212 (MQ=255) cTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATCATGTCGGACATTTCACGAAACGCCCCTTTGcc > 1:484364/1‑245 (MQ=255) cTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATCATGTCGGACATTTCACGAAACGCCCCTTTGCCACCGc > 1:780522/1‑250 (MQ=255) cTATTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATCATGTCGGACATTTCACGAAACGCCCCTTTGCCACCGc > 1:852119/1‑250 (MQ=255) aTTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATCATGTCGGACATTTCACGAAACGCCCCTTTGCCAc < 1:254490/245‑1 (MQ=255) aTTAAACTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATCATGTCGGACATTTCACGAAACGCCCCTTTGCCACCGCCTa > 1:494048/1‑251 (MQ=255) aaCTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCgg < 1:765293/169‑1 (MQ=255) aaCTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATCATGTCGGACATTTCACGAAACGCCCCTTTGCCACCGCCTAAAcc < 1:90429/251‑1 (MQ=255) aaCTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATCATGTCGGACATTTCACGAAACGCCCCTTTGCCACCGCCTAAAc > 1:649771/1‑250 (MQ=255) aaCTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATCATGTCGGACATTTCACGAAACGCCCCTTTGCCACCGCCTAAAc < 1:233233/250‑1 (MQ=255) aCTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATc > 1:372146/1‑206 (MQ=255) aCTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGAGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATCATGTCGGACATTTCACGAAACGCCCCTTTGCCACCGCCTAAAccc < 1:613509/251‑1 (MQ=255) cTAGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATCATGTCGGACATTTCACGAAACGCCCCTTTGCCACCGCCTAAACCCa > 1:378978/1‑251 (MQ=255) aGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTg > 1:63960/1‑144 (MQ=255) aGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTaaa > 1:206476/1‑174 (MQ=255) aGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGt > 1:228871/1‑177 (MQ=255) aGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATCATGTCGGACATTTCACGAAACGCCCCTTTGCCACCGCCTAAACCCAAg > 1:9507/1‑251 (MQ=255) aGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATCATGTCGGACATTTCACGAAACGCCCCTTTGCCACCGCCTAAACCCAAg > 1:827503/1‑251 (MQ=255) aGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATCATGTCGGACATTTCACGAAACGCCCCTTTGCCACCGCCTAAACCCAAg > 1:496159/1‑251 (MQ=255) aGTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATCATGTCGGACATTTCACGAAACGCCCCTTTGCCACCGCCTAAACCCAAg > 1:492868/1‑251 (MQ=255) gTACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCg < 1:792145/193‑1 (MQ=255) tACAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATCATGTCGGACATTTCACGAAACGCCCCTTTGCCACCGCCTAAACCCAAGAc < 1:849414/251‑1 (MQ=255) aCAAGGGGTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATCATGTCGGACATTTCACGAAACGCCCCTTTGCCACCGCCTAAACCCAAGACg < 1:21215/251‑1 (MQ=255) gggTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCt > 1:772737/1‑180 (MQ=255) gggTGAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGTGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATCATGTCGGACATTTCACGAAACGCCCCTTTGCCACCGCCTAAACCCAAGACGTAAt > 1:168735/1‑250 (MQ=255) | CCCAAACAGGAAATTTTGATGGCGGCATTGACGAGTAATAAACTTTTTAAACTGTTTTTGCTGGAAATTTCGGCGGATTCTAAAAGCAGGGTGTTCGGTTTGTTTTCACATAATGTGGCGAAAATTGCGGTAGGATCGCTGTGATAAGGGACATTTTGCGTAAACGTTTGAATAAAAGCGGAGGACATTCTCATTTCCTTATAAAGCATGAAATAAATTTTGCACTATTAAACTAGTACAAGGGGTAAAAGTCAAGGGAAATAAAAATTTTGTTTAAGGTTTATGGAAATAGTTGAGGGGAAAAGTAGGGCGCGTTATCTGCGCCCGTAAAGTGCGGTTCTTTTTTCAAGCGTTTTTACTGTGCCATCTTCTTCGCTGTTTTCAAAAATCCTTGTGCGGAGCTGTAAATGTCGCTTTTGCCTTGGGCGTTTAAGATCATGTCGGACATTTCACGAAACGCCCCTTTGCCACCGCCTAAACCCAAGACGTAAT > 1/1228145‑1228636 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |