Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,206,820 T→C intergenic (+47240/+214117) unknown → / ← unknown tRNA‑Val‑GAC/tRNA‑Met‑CAT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,206,8200TC100.0% 150.3 / NA 54intergenic (+47240/+214117)unknown/unknowntRNA‑Val‑GAC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (31/23);  total (31/23)

CGATACAACGCACACAGGTTTAAGGTATTTTGATTACGGGATAAGGCAAAAATTGGCAGACCGGAGCTAATGCGAGACATTAACAGCGGGGTGCGACCGGAACTGGTCATAGCGATAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCTAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCACGTCCATGACTTCCGCACGGGTTGG‑CATTGGGTTGCTGATCATAGATTCCATCATTTGTGTCGCGGTGATTACCACGCGATTTAATTTACGGGAGCGGCGGATTAATTTTTTCTGTACGCCGACCAATTC  >  1/1206575‑1207056
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                             
cgATACAACGCACACAGGTTTAAGGTATTTTGATTACGGGATAAGGCAAAAATTGGCAGACCGGAGCTAATGCGAGACATTAACAGCGGGGTGCGACCGGAACTGGTCATAGCGATAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAAc                                                                                                                                                                                                                                           <  1:213428/250‑1 (MQ=255)
                ggTTTAAGGTCTTTTGATTACGGGATAAGGCAAAAATTGGCAGACCGGAGCTAATGCGAGACATTAACAGCGGGGTGCGACCGGAACTGGTCATAGCGATAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATggcg                                                                                                                                                                                                                          >  1:130756/1‑251 (MQ=255)
                ggTTTAAGGTATTTTGATTACGGGATAAGGCAAAAATTGGCAGACCGGAGCTAATGCGAGACATTAACAGCGGGGTGCGACCGGAACTGGTCATAGCGATAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATAc                                                                                                                                                                                                                                       >  1:502020/1‑238 (MQ=255)
                              tGATTACGGGATAAGGCAAAAATTGGCAGACCGGAGCTAATGCGAGACATTAACAGCGGGGTGCGACCGGAACTGGTCATAGCGATAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTcggc                                                                                                                                                                                                            <  1:901628/251‑1 (MQ=255)
                                  tACGGGATAAGGCAAAAATTGGCAGACCGGAGCTAATGCGAGACATTAACAGCGGGGTGCGACCGGAACTGGTCATAGCGATAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCgggg                                                                                                                                                                                                        <  1:142407/251‑1 (MQ=255)
                                          aaGGCAAAAATTGGCAGACCGGAGCTAATGCGAGACATTAACAGCGGGGTGCGACCGGAACTGGTCATAGCGATAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGAcc                                                                                                                                                                                                <  1:771751/251‑1 (MQ=255)
                                             gCAAAAATTGGCAGACCGGAGCTAATGCGAGACATTAACAGCGGGGTGCGACCGGAACTGGTCATAGCGATAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACcg                                                                                                                                                                                               <  1:679543/249‑1 (MQ=255)
                                                                        cGAGACATTAACAGCGGGGTGCGACCGGAACTGGTCATAGCGATAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTg                                                                                                                                                                   <  1:892567/250‑1 (MQ=255)
                                                                             cATTAACAGCGGGGTGCGACCGGAACTGGTCATAGCGATAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATAc                                                                                                                                                                                                                                       >  1:298269/1‑177 (MQ=255)
                                                                             cATTAACAGCGGGGTGCGACCGGAACTGGTCATAGCGATAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCgg                                                                                                                                                             >  1:147105/1‑251 (MQ=255)
                                                                             cATTAACAGCGGGGTGCGACCGGAACTGGTCATAGCGATAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCgg                                                                                                                                                             >  1:680894/1‑251 (MQ=255)
                                                                             cATTAACAGCGGGGTGCGACCGGAACTGGTCATAGCGATAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCgg                                                                                                                                                             >  1:514507/1‑251 (MQ=255)
                                                                             cATTAACAGCGGGGTGCGACCGGAACTGGTCATAGCGATAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGGTTTGGCAGAAAGCATTTCTGCGTCgg                                                                                                                                                             >  1:100946/1‑251 (MQ=255)
                                                                                  aCAGCGGGGTGCGACCGGAACTGGTCATAGCGATAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGGTTCGGCAGAAAGCATTACTGCGTCGGGGCCg                                                                                                                                                        >  1:115121/1‑251 (MQ=255)
                                                                                           tGCGACCGGAACTGGTCATAGCGATAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATAc                                                                                                                                                <  1:259465/250‑1 (MQ=255)
                                                                                           tGCGACCGGAACTGGTCATAGCGATAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATAc                                                                                                                                                <  1:65123/250‑1 (MQ=255)
                                                                                             cGACCGGAACTGGTCATAGCGATAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACcg                                                                                                                                              <  1:89515/250‑1 (MQ=255)
                                                                                              gACCGGAACTGGTCATAGCGATAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGGTTCGGCAGAAAACATTACTGCGTCGGGGCCGGCCCATAc                                                                                                                                                >  1:366105/1‑247 (MQ=255)
                                                                                                   gAACTGGTCATAGCGATAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTg                                                                                                                                                                                                   <  1:631215/191‑1 (MQ=255)
                                                                                                   gAACTGGTCATAGCGATAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTTGGCAGAAAGCATTACCGCGTCGGTGCCGTCCAATACCGCGGTCg                                                                                                                                        >  1:834157/1‑250 (MQ=255)
                                                                                                   gAACTGGTCATAGCGATAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTAc                                                                                                                                                                     <  1:466973/221‑1 (MQ=255)
                                                                                                               gCGATAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATAc                                                                                                                                                                                                                                       <  1:430762/143‑1 (MQ=255)
                                                                                                                cGATAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCACGTCCATGAc                                                                                                                           <  1:737833/250‑1 (MQ=255)
                                                                                                                   tAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCACGTCCATGACTTc                                                                                                                        >  1:647884/1‑250 (MQ=255)
                                                                                                                                 ccTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCgggg                                                                                                                                                                                                        <  1:232476/156‑1 (MQ=255)
                                                                                                                                 ccTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGAcc                                                                                                                                                                                                >  1:805772/1‑164 (MQ=255)
                                                                                                                                 ccTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGGATTGACCGGCGGCGGTTTCCGCAGAAAGCATTACTGCGTCGGTTCCGTCCAATAc                                                                                                                                                >  1:179771/1‑212 (MQ=255)
                                                                                                                                    ttCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATAc                                                                                                                                                >  1:494125/1‑209 (MQ=255)
                                                                                                                                    ttCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCACGTCCATGACTTCCGCACGGGTTGG‑CAt                                                                                                        <  1:326744/248‑1 (MQ=255)
                                                                                                                                            aTTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCACGTCCATGACTTCCGCACGGGTTGG‑CATTGGGTTGCTg                                                                                              <  1:461783/250‑1 (MQ=255)
                                                                                                                                                 cAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCACGTCCATGACTTCCGCACGGGTTGG‑CATTGGGTTGCTGATCAt                                                                                         <  1:420510/250‑1 (MQ=255)
                                                                                                                                                                          ggTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCCGCGGCGGGTTCGGCAGAAAGCATTACTGCGCCGGTGCCCTCCAATACCGCGTTCGCCACCGCCATGACTTCCGCACGGGTTGG‑CATTGGGTTGCTGATCATAGATTCCATCATTTGTGTCGCGGTGa                                                               >  1:797636/1‑251 (MQ=255)
                                                                                                                                                                           gTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCACGTCCATGACTTCCGCACGGGTTGG‑CATTGGGTTGCTGATCATAGATTCCATCATTTGTGTCGCGGTGAt                                                              >  1:229750/1‑251 (MQ=255)
                                                                                                                                                                               cttcAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCACGTCCATGACTTCCGCACGGGTTGG‑CATTGGGTTGCTGATCATAGATTCCATCATTTGTGTCGCGGTGATTAc                                                           >  1:168167/1‑250 (MQ=255)
                                                                                                                                                                               cttcAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCACGTCCATGACTTCCGCACGGGTTGG‑CATTGGGTTGCTGATCATAGATTCCATCATTTGTGTCGCGGTGATTAc                                                           >  1:877836/1‑250 (MQ=255)
                                                                                                                                                                                  cAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCACGTCCATGACTTCCGCACGGGTTGG‑CATTGGGTTGCTGATCATAGATTCcat                                                                                >  1:634331/1‑226 (MQ=255)
                                                                                                                                                                                         gTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGATTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACcg                                                                                                                                              >  1:519470/1‑158 (MQ=255)
                                                                                                                                                                                             aaTTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCACGTCCATGACTTCCGCACGGGTTGG‑CATTGGGTTGCTGATCATAGATTCCATCATTTGTGTCGCGGTGATTACCACGCGatttaattt                                            <  1:897089/251‑1 (MQ=255)
                                                                                                                                                                                              aTTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCACGTCCATGACt                                                                                                                          <  1:720565/173‑1 (MQ=255)
                                                                                                                                                                                               ttCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCACGTCCATGACTTCCGCACGGGTTGG‑CATTGGGTTGCTGATCATAGATTCCATCATTTGTGTCGCGGTGATTACCACGCGatttaattta                                           >  1:194491/1‑250 (MQ=255)
                                                                                                                                                                                               ttCCATATCCATACGATGATGAGAAGAATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGTGGCGGTTTCGGCAGAAAGCATTAATGCGTCggcg                                                                                                                                                           >  1:319375/1‑137 (MQ=255)
                                                                                                                                                                                                      tccataCGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCACGTCCATGACTTCCGCACGGGTTGG‑CATTGGGTTGCTGATCATAGATTCCATCATTTGTGTCGCGGTGATTACCACGCGATTTAATTTACGGGAgcg                                   >  1:845774/1‑251 (MQ=255)
                                                                                                                                                                                                       ccataCGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCACGTCCATGACTTCCGCACGGGTTGG‑CATTGGGTTGCTGATCATAGATTCCATCATTTGTGTCGCGGTGATTACCACGCGATTTAATTTACGGGAgcgg                                  >  1:544898/1‑251 (MQ=255)
                                                                                                                                                                                                       ccataCGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCACGTCCATGACTTCCGCACGGGTTGG‑CATTGGGTTGCTGATCATAGATTACATCATTTGTGTCGCGGTGATTACCACGCGATTTAATTTACGGGAgcgg                                  >  1:803196/1‑251 (MQ=255)
                                                                                                                                                                                                         ataCGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCGCGTCCATGACTTCCGCACGGGTTGG‑CATTGGGTTGCTGAt                                                                                            <  1:25728/191‑1 (MQ=255)
                                                                                                                                                                                                            cGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCACGTCCATGACTTCCGCACGGGTTGG‑CATTGGGTTGCTGATCATAGATTCCATCATTTGTGTCGCGGGGATTACCACGCGATTTAATTTACGGGAGCGGCGGAt                             >  1:437577/1‑251 (MQ=255)
                                                                                                                                                                                                              atgatgAGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCACGGCCATGACTTCCGCACGGGTTAG‑CATTGGGGTGCTGATCATAGATTCCATCATTTGTGTCGCGGGGATTACCACGCGATTTAATTTACGGGAGCGGCGGATTa                           >  1:453424/1‑251 (MQ=255)
                                                                                                                                                                                                                gatgaGAAGTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCCATACCGCGTTCCCCACGTCCATGACCTCCGCACGGGATGGCCATT‑GGTTTCTGATCAt                                                                                         >  1:829123/1‑187 (MQ=255)
                                                                                                                                                                                                                        gTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCACGTCCATGACTTc                                                                                                                        <  1:428457/149‑1 (MQ=255)
                                                                                                                                                                                                                        gTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCACGTCCATGACTTTCGCACGGGCTGG‑CATTGGGTTGCTGATCATAGATTCCCTCATTTGTGTCGCGGTGATTACCACGCGATTTAATTTACGGGAGCGGCGGATTAATTTTTTCtt                 >  1:227953/1‑250 (MQ=255)
                                                                                                                                                                                                                        gTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCACGTCCATGACTTCCGCACGGGTTGG‑CAt                                                                                                        >  1:536336/1‑164 (MQ=255)
                                                                                                                                                                                                                        gTATTTACGCTAGGCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCACGTCCATGACTTCCGCACGGGTTGG‑CATTGGGTTGCTGATCATAGATTCCATCATTTGTGTCGCGGTGATTACCACGCGATTTAATTTACGGGAGCGGCGGATTAAttttttttg                 >  1:116790/1‑248 (MQ=255)
                                                                                                                                                                                                                                     gCATTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCACGTCCATGACTTCCGCACGGGTTGG‑CATTGGGTTGCTGATCATAGATTCCATCATTTGTGTCGCGGTGATTACCACGCGATTTAATTTACGGGAGCGGCGGATTAATTTTTTc                   <  1:268445/236‑1 (MQ=255)
                                                                                                                                                                                                                                       aTTTTTTCCGCACCCAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCACGTCCATGACTTCCGCACGGGTTGG‑CATTGGGTTGCTGATCATAGATTCCATCATTTGTGTCGCGGTGATTACCACGCGATTTAATTTACGGGAGCGGCGGATTAATTTTTTCTGTACGCCGACCAATTc  <  1:259697/251‑1 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                             
CGATACAACGCACACAGGTTTAAGGTATTTTGATTACGGGATAAGGCAAAAATTGGCAGACCGGAGCTAATGCGAGACATTAACAGCGGGGTGCGACCGGAACTGGTCATAGCGATAATTGCAGTCACGCCTTTCATGTGATTGGCAGCGAACATGGCGGACATGGCAATGGTTTCTTCAGGATTGTCGAATTCCATATCCATACGATGATGAGAAGTATTTACGCTAGGCATTTTTTCCGCACCTAAACATACTTTCGCCATGGCGGCAACGGTTTCGGCGGGGTATTGACCGGCGGCGGTTTCGGCAGAAAGCATTACTGCGTCGGTGCCGTCCAATACCGCGTTCGCCACGTCCATGACTTCCGCACGGGTTGG‑CATTGGGTTGCTGATCATAGATTCCATCATTTGTGTCGCGGTGATTACCACGCGATTTAATTTACGGGAGCGGCGGATTAATTTTTTCTGTACGCCGACCAATTC  >  1/1206575‑1207056

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑