| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 250,089 | T→C | intergenic (+116778/+12142) | unknown → / ← unknown | tRNA‑Val‑TAC/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 250,089 | 0 | T | C | 100.0% | 232.2 / NA | 81 | intergenic (+116778/+12142) | unknown/unknown | tRNA‑Val‑TAC/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (43/38); total (43/38) | |||||||||||
TCAGACACCTTCTATCCGGGGCAAGAACGTTACGACACCTTTACCGGCAAAATCTATCGCCACTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGTCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGCCCTTAAAGTGCGGTTGTCTTTCCCGGCGTTTTTTTATTCCACCGCTTCATTGGAAGGCCAAGCGTTCACCACCGCTTTCACCAAAGTCGCCAGCGGAATG > 1/249842‑250332 | tCAGACACCTTCTATCCGGGGCAAGAACGTTACGACACCTTTACCGGCAAAATCTATCGCCACTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGccat > 1:63545/1‑251 (MQ=255) ccTTCTATCCGGGGCAAGAACGTTACGACACCTTTACCGGCAAAATCTATCGCCACTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCa > 1:332764/1‑251 (MQ=255) ccTTCTATCCGGGGCAAGAACGTTACGACACCTTTACCGGCAAAATCTATCGCCACTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCa > 1:302832/1‑251 (MQ=255) ccTTCTATCCGGGGCAAGAACGTTACGACACCTTTACCGGCAAAATCTATCGCCACTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGG‑AATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAg > 1:455323/1‑251 (MQ=255) cTTCTATCCGGGGCAAGAACGTTACGACACCTTTACCGGCAAAATCTATCGCCACTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAg < 1:66662/251‑1 (MQ=255) cTTCTATCCGGGGCAAGAACGTTACGACACCTTTACCGGCAAAATCTATCGCCACTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAg < 1:373091/251‑1 (MQ=255) cTTCTATCCGGGGCAAGAACGTTACGACACCTTTACCGGCAAAATCTATCGCCACTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAg < 1:413208/251‑1 (MQ=255) cTATCCGGGGCAAGAACGTTACGACACCTTTACCGGCAAAATCTATCGCCACTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAgtgg > 1:81960/1‑251 (MQ=255) aTCCGGGGCAAGAACGTTACGACACCTTTACCGGCAAAATCTATCGCCACTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAgtggtg > 1:45222/1‑251 (MQ=255) cGGGGCAAGAACGTTACGACTCCTTTACCGGCAAAATCTATCGCCACTTCCAAGGCTCGCTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGaaa < 1:59993/251‑1 (MQ=255) gggCAAGAACGTTACGACACCTTTACCGGCAAAATCTATCGCCACTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAag > 1:787748/1‑250 (MQ=255) gAACGTTACGACACCTTTACCGGCAAAATCTATCGCCACTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCggg > 1:305384/1‑251 (MQ=255) acacCTTTACCGGCAAAATCTATCGCCACTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGt < 1:253836/250‑1 (MQ=255) cacCTTTACCGGCAAAATCTATCGCCACTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTgg < 1:275014/248‑1 (MQ=255) ccTTTACCGGCAAAATCTATCGCCACTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTaa > 1:186611/1‑251 (MQ=255) tttACCGGCAAAATCTATCGCCACTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACg < 1:55462/251‑1 (MQ=255) aaTCTATCGCCACTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGc < 1:87509/251‑1 (MQ=255) aaTCTATCGCCACTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGc < 1:657264/251‑1 (MQ=255) aaTCTATCGCCACTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGc < 1:233521/251‑1 (MQ=255) aaTCTATCGCCACTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGc < 1:29918/251‑1 (MQ=255) aTCTATCGCCACTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCTCGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGACAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGCGAAAGAAGCGGGATTACTGGTTTAACGTCAATCATAGCa > 1:410454/1‑251 (MQ=255) tCTATCGCCACTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAg > 1:356538/1‑207 (MQ=255) tCTATCGCCACTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCACGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAg < 1:155695/251‑1 (MQ=255) cTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAaaagaa > 1:121799/1‑251 (MQ=255) cTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAaaagaa > 1:706569/1‑251 (MQ=255) ttCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGttt < 1:408151/223‑1 (MQ=255) tCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGc < 1:165868/237‑1 (MQ=255) tcactcaAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATg < 1:731838/251‑1 (MQ=255) ctcaAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAg > 1:696441/1‑251 (MQ=255) ggCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATgg > 1:145124/1‑251 (MQ=255) gCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATgg > 1:742873/1‑250 (MQ=255) cAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGc < 1:387740/250‑1 (MQ=255) cAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGc < 1:468411/250‑1 (MQ=255) gAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAg > 1:818361/1‑210 (MQ=255) gTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATg > 1:636609/1‑251 (MQ=255) gaATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTaaa > 1:110184/1‑251 (MQ=255) ttATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACg < 1:886735/183‑1 (MQ=255) tATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACg < 1:769213/251‑1 (MQ=255) gAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAagc < 1:801298/158‑1 (MQ=255) aTCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGc > 1:199923/1‑232 (MQ=255) cGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGAc < 1:227764/251‑1 (MQ=255) cGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGAc < 1:693986/251‑1 (MQ=255) cGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGAc < 1:792683/251‑1 (MQ=255) aCCTTGTTCGCCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGAc < 1:414924/247‑1 (MQ=255) cTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCa > 1:34094/1‑249 (MQ=255) gTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTg > 1:89047/1‑251 (MQ=255) gTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTg > 1:890546/1‑251 (MQ=255) ttCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTgg < 1:695472/251‑1 (MQ=255) tCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGc < 1:79450/251‑1 (MQ=255) ccATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGaaa > 1:871770/1‑131 (MQ=255) gtgtTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAg > 1:475526/1‑250 (MQ=255) gtTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGcc > 1:763206/1‑250 (MQ=255) ggcaTGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGCCCTTAAAGTGCGGTTGTCTTTCCCg > 1:577624/1‑251 (MQ=255) tGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGCCCTTAAAGTGCGGTTGTCTTTCCCGGCGt > 1:604397/1‑251 (MQ=255) aGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAg > 1:836381/1‑86 (MQ=255) aGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAagc > 1:381314/1‑96 (MQ=255) gCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGCCCTTAAAGTGCGGTTGTCTTTCCCGGCGTTTTTTTATTc > 1:837759/1‑250 (MQ=255) aTTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAg > 1:885789/1‑207 (MQ=255) aTTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGCCCTTAAAg > 1:82535/1‑216 (MQ=255) aTTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGCCCTTAAAGTGCGGTTGTCTTTCCCGGCGTTTTTTTATTCCAc > 1:312532/1‑250 (MQ=255) tGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGCCCTTAAAGTGCGGTTGTCTTTCCCGGCGTTTTTTTATTCCACCGc < 1:521911/251‑1 (MQ=255) gTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATg > 1:533815/1‑149 (MQ=255) gTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGCCCTTAAAGTGCGGTTGTCTTTCCCGGCGTTTTTTTATTc < 1:495974/244‑1 (MQ=255) tAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGTATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGCCCTTAAAGTGCGGTTGTCTTTCCCGGCGTTTTTTTATTCCACCGCtt > 1:394523/1‑250 (MQ=255) tAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGCCCTTAAAGTGCGGTTGTCTTTCCCGGCGTTTTTTTATTCCACCGCtt > 1:122266/1‑250 (MQ=255) aaTCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGCCCTTAAAGTGCGGTTGTCTTTCCCGGCGTTTTTTTATTCCACCGCTTCa < 1:429543/251‑1 (MQ=255) aTCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGCCCTTAAAGTGCGGTTGTCTTTCCCGGCGTTTTTTTATTc < 1:270729/240‑1 (MQ=255) aTCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGCCCTTAAAGTGCGGTTGTCTTTCCCGGCGTTTTTTTATTCCACCGCTTCAt > 1:566633/1‑251 (MQ=255) cGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGCCCTTAAAGTGCGGTTGTCTTTCCCGGCGTTTTTTTATTCCACCGCTTCATTg < 1:816401/251‑1 (MQ=255) tACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGCCCTTAAAGTGCGGTTGTCTTTCCCGGCGTTTTTTTATTCCACCGCTTCATTgg < 1:66271/250‑1 (MQ=255) cAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGCCCTTAAAGTGCGGTTGTCTTTCCCGGCGTTTTTTTATTCCACCGCTTCATTGGAAGGc < 1:844794/251‑1 (MQ=255) aCAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGCCCTTAAAGTGCGGTTGTCTTTCCCGGCGTTTTTTTATTCCACCGCTTCATTGGAAGGCCa > 1:212679/1‑251 (MQ=255) aTTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGCCCTTAAAGTGCGGTTGTCTTTCCCGGCGTTTTTTTATTCCACCGCTTCATTGGAAGGCCAAGCGtt > 1:879728/1‑250 (MQ=255) tCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCG‑AAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGCCCTTAAAGTGCGGTTGTCTTTCCCGGCGTTTTTTTATTCCACCGCTTCATTGGAAGGCCAAGCGTTcacc < 1:47001/251‑1 (MQ=255) cgaaGAAACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGc < 1:155225/86‑1 (MQ=255) aagaaACCATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGCCCTTAAAGTGCGGTTGTCTTTCCCGGCGTTTTTTTATTCCACCGCTTCATTGGAAGGCCAAGCGTTCACCACCGCtt < 1:796690/251‑1 (MQ=255) ccATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCAc > 1:722903/1‑155 (MQ=255) ccATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGCCCTTAAAGTGCGGTTGTCTTTcc < 1:129383/191‑1 (MQ=255) ccATTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGCCCTTAAAGTGCGGTTGTCTTTCCCGGCGTTTTTTTATTCCACCGCTTCATTGGAAGGCCAAGCGTTCACCACCGCTTTCACCa > 1:622790/1‑251 (MQ=255) aTTAAATCCACCGAAGAAAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGAc > 1:687161/1‑148 (MQ=255) aagaaAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGCCCTTAAAGTGCGGTTGTCTTTCCCGGCGTTTTTTTATTCCACCGCTTCATTGGAAGGCCAAGCGTTCACCACCGCTTTCACCAAAGTCGCCAGCGGaa < 1:614872/251‑1 (MQ=255) gaaAAAGCCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGCCCTTAAAGTGCGGTTGTCTTTCCCGGCGTTTTTTTATTCCACCGCTTCATTGGAAGGCCAAGCGTTCACCACCGCTTTCACCAAAGTCGCCAGCGGAATg > 1:117722/1‑251 (MQ=255) | TCAGACACCTTCTATCCGGGGCAAGAACGTTACGACACCTTTACCGGCAAAATCTATCGCCACTTCCAAGGCTCACTCAAACAATGGCAGGAATTGCACGTGATGAATTATGAAATGGAATCCGCCACCTTGTTCACCATGTGTTCCGCCTTGGGTCTGCGGGCAGGCATGATAGCCGGTGCCATTGTTAATCGTACCCAACAGGAAATTCCGAACGAAGAAACCATTAAATCCACCGAAGAAAAAGTCATTCATGCAGTGGTGAAAGCAGCGGGATTATTGGTTTAACGTCAATCATAGCAGGTCAAAAGAAAGCAAAAATGCAGCCGAAAATGGCTGCATTTTTTATGCTAAAAACGTTTTGATTCTAGACCGCACTTTGGCTTTTAGCCCTTAAAGTGCGGTTGTCTTTCCCGGCGTTTTTTTATTCCACCGCTTCATTGGAAGGCCAAGCGTTCACCACCGCTTTCACCAAAGTCGCCAGCGGAATG > 1/249842‑250332 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |