Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,203,352 C→T intergenic (+43772/+217585) unknown → / ← unknown tRNA‑Val‑GAC/tRNA‑Met‑CAT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,203,3520CT100.0% 213.2 / NA 79intergenic (+43772/+217585)unknown/unknowntRNA‑Val‑GAC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (38/41);  total (38/41)

TTTTGCTCGGGCGTTAGCCAAGTATCGCGGGGATTATATCAGTGATACCAAACCAATTTTATCTGCGGTATTACCGAACGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACCGGACACTACTGGAAATTTATCATAAGGGCGATTATGCGGAATTTCTTAAACAAGCGGTTATCTGCGGGAAGAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTGGTCGATTATATTCCGTTGCATGAACGCCTAGGCACCATCGAAGATACTCCGGAATTATTCTTACGCCAACATAAGAATTATTTCCACTTATTCTATCCAAGCGAAGCAA  >  1/1203111‑1203589
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                             
ttttGCTAGGGCGTTAGCCAAGTATCGGGGGGATTATATCAGTGATACTAAACCGATTTTATCGGCGGTATTACCGCCCGGCGAGCGGACACAGATTTTTCTCCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACactac                                                                                                                                                                                                                                      <  1:476477/251‑1 (MQ=255)
      acGGGCGTTAGCCAGGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACGGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGaa                                                                                                                                                                                                                                 <  1:575718/249‑1 (MQ=255)
         ggCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAAttt                                                                                                                                                                                                                             >  1:893816/1‑251 (MQ=255)
                  cAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGaa                                                                                                                                                                                                                                 <  1:852425/238‑1 (MQ=255)
                   aaGTATGGTGGGGATTATATCAGTGATACTAACCCTTTTTTATCTGCGGTATTACCGCCCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAggg                                                                                                                                                                                                                   <  1:109856/251‑1 (MQ=255)
                               gATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGAt                                                                                                                                                                                                               >  1:263312/1‑243 (MQ=255)
                               gATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTAt                                                                                                                                                                                                            >  1:353341/1‑246 (MQ=255)
                               gATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGa                                                                                                                                                                                                       >  1:841119/1‑251 (MQ=255)
                                aTTATATAAGTGATACTAAACCGTTTTTATCTGCGGTATTCCCGACGGGCGAGCGGACACAGATTTTTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGaa                                                                                                                                                                                                      <  1:240064/251‑1 (MQ=255)
                                 ttATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAAt                                                                                                                                                                                                     >  1:648888/1‑251 (MQ=255)
                                   atatCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGCCCGGCGGGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGaa                                                                                                                                                                                                                                 <  1:692709/221‑1 (MQ=255)
                                   atatCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCTGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAAtt                                                                                                                                                                                                    >  1:343047/1‑250 (MQ=255)
                                   atatCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACactac                                                                                                                                                                                                                                      <  1:886079/216‑1 (MQ=255)
                                       cAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACactac                                                                                                                                                                                                                                      >  1:723338/1‑212 (MQ=255)
                                         gTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTaaa                                                                                                                                                                                             >  1:635848/1‑251 (MQ=255)
                                          tGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTCCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAAc                                                                                                                                                                                            <  1:186552/251‑1 (MQ=255)
                                            aTACTAAACCGATTTTATCTGCGGTATTCCCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACa                                                                                                                                                                                           <  1:619725/250‑1 (MQ=255)
                                                          ttttcggcggttttaccgccgggcgggcgGACACAGATTTTTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCgg                                                                                                                                                                            <  1:184635/230‑1 (MQ=255)
                                                                   gTATTCCCGACCGGCGAGCGGACAAAGATTTTTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGaa                                                                                                                                                                                                                                 <  1:75492/189‑1 (MQ=255)
                                                                     aTTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGacac                                                                                                                                                                                                                                         >  1:316800/1‑179 (MQ=255)
                                                                          cgcccGGCGAGCGGACACAGATTATTCTCCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGAtt                                                                                                                                                            <  1:69356/247‑1 (MQ=255)
                                                                                   aGCGAACAAAGATTATTCTCCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGAtt                                                                                                                                                                                                              <  1:621164/192‑1 (MQ=255)
                                                                                             gATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTaa                                                                                                                                                                                              >  1:341212/1‑198 (MQ=255)
                                                                                               ttattCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTaa                                                                                                                                                                                              >  1:839962/1‑196 (MQ=255)
                                                                                               ttattCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCggg                                                                                                                                       >  1:611625/1‑251 (MQ=255)
                                                                                               ttattCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCggg                                                                                                                                       >  1:473939/1‑251 (MQ=255)
                                                                                                 attCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGa                                                                                                                                      >  1:677345/1‑250 (MQ=255)
                                                                                                    ctcccgcccgcCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAAc                                                                                                                                  <  1:603971/248‑1 (MQ=255)
                                                                                                              ccAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATg                                                                                                                        >  1:234183/1‑251 (MQ=255)
                                                                                                              ccAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATg                                                                                                                        <  1:228276/251‑1 (MQ=255)
                                                                                                                        ggAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGaaa                                                                                                                                                                                                                                >  1:871615/1‑137 (MQ=255)
                                                                                                                             ccATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGAt                                                                                                         >  1:529214/1‑251 (MQ=255)
                                                                                                                                 cAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCtagt                                                                                                             >  1:157689/1‑240 (MQ=255)
                                                                                                                                 cAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATtata                                                                                                     >  1:665791/1‑251 (MQ=255)
                                                                                                                                   gTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACactac                                                                                                                                                                                                                                      <  1:258380/120‑1 (MQ=255)
                                                                                                                                   gTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATa                                                                                                                                                                                                                       <  1:160738/135‑1 (MQ=255)
                                                                                                                                   gTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAAc                                                                                                                                                                                            <  1:711394/162‑1 (MQ=255)
                                                                                                                                   gTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACa                                                                                                                                                                                           <  1:879769/163‑1 (MQ=255)
                                                                                                                                   gTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAatat                                                                                                                                                                   <  1:239679/187‑1 (MQ=255)
                                                                                                                                   gTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATAtt                                                                                                   >  1:720757/1‑251 (MQ=255)
                                                                                                                                   gTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATAtt                                                                                                   >  1:235783/1‑251 (MQ=255)
                                                                                                                                    tATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATtata                                                                                                     <  1:472662/248‑1 (MQ=255)
                                                                                                                                    tATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTc                                                                                                  <  1:148275/251‑1 (MQ=255)
                                                                                                                                         cGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTg                                                                                             <  1:508718/251‑1 (MQ=255)
                                                                                                                                                 aaaCCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACg                                                                                     <  1:213533/251‑1 (MQ=255)
                                                                                                                                                      gAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACGCCtgg                                                                                >  1:37453/1‑249 (MQ=255)
                                                                                                                                                      gAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTATGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACGCCtgg                                                                                >  1:423158/1‑249 (MQ=255)
                                                                                                                                                          aaGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACGCCtggggac                                                                            <  1:728520/251‑7 (MQ=255)
                                                                                                                                                          aaGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACGCCtggggac                                                                            <  1:193704/251‑7 (MQ=255)
                                                                                                                                                            gTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAAttcct                                                                                                                                                                                                 >  1:663125/1‑129 (MQ=255)
                                                                                                                                                            gTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACGCCTGGGGACCa                                                                          >  1:564395/1‑251 (MQ=255)
                                                                                                                                                               tttttttGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACGCCTGGGGACCAttg                                                                       <  1:118863/251‑3 (MQ=255)
                                                                                                                                                                           ggATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATg                                                                                                                        <  1:722982/190‑1 (MQ=255)
                                                                                                                                                                           ggATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTc                                                                                                  <  1:381927/212‑1 (MQ=255)
                                                                                                                                                                           ggATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACGCCtggggacc                                                                           >  1:569426/1‑228 (MQ=255)
                                                                                                                                                                           ggATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACGCCTGGGGACCATTGAAGATAcccc                                                             >  1:222634/1‑246 (MQ=255)
                                                                                                                                                                           ggATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACGCCTGGGGACCATTGAAGATACCCCgg                                                           >  1:667406/1‑251 (MQ=255)
                                                                                                                                                                           ggATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACGCCTGGGGACCATTGAAGATACCCCgg                                                           >  1:72941/1‑251 (MQ=255)
                                                                                                                                                                           ggATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACGCCTGGGGACCATTGAAGATACCCCgg                                                           >  1:333253/1‑251 (MQ=255)
                                                                                                                                                                            gATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTatat                                                                                                    >  1:5820/1‑209 (MQ=255)
                                                                                                                                                                              ttattaCATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTGTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACg                                                                                     <  1:441469/222‑1 (MQ=255)
                                                                                                                                                                                  taCATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACGCCTGGGGACCATTGAAGATACCCCGGAattatt                                                    >  1:880128/1‑251 (MQ=255)
                                                                                                                                                                                       caacaaCGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAAttcc                                                                                                                                                                                                  <  1:513864/104‑3 (MQ=255)
                                                                                                                                                                                        aacaacGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACGCCTGGGGACCATTGAAGATACCCCGGAATTATTCTTACg                                              <  1:697527/251‑1 (MQ=255)
                                                                                                                                                                                                cTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAAc                                                                                                                                                                                            <  1:311041/101‑1 (MQ=255)
                                                                                                                                                                                                   ttttAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACGCCtggggac                                                                            <  1:713014/210‑7 (MQ=255)
                                                                                                                                                                                                     ttAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACGCCTGGGGACCATTGAAGATACCCCGGAATTATTCTTACGCCAACATAAGaac                                 <  1:697758/251‑2 (MQ=255)
                                                                                                                                                                                                               tATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACGCCTGGGGACCATTGAAGATACCCCGGAATTATTCTTACGCCAACATAAGAACTATTTCCACt                       <  1:82622/251‑1 (MQ=255)
                                                                                                                                                                                                                     gACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACGCCTGGGGACCATTGAAGATACCCCGGAATTATTCTTACGCCAACAt                                       >  1:92988/1‑229 (MQ=255)
                                                                                                                                                                                                                      aCGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACGCCTGGGGACCATTGAAGATACCCCGGAATTATTCTTACGCCAACATAAGAACTATTTCCACTTATTc                  <  1:121596/249‑1 (MQ=255)
                                                                                                                                                                                                                       cGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACGCCTGGGGACCATTGAAGATACCCCGGAATTATTCTTACGCCAACATAAGAACTATTTCCACTTATTCTAt               >  1:700861/1‑251 (MQ=255)
                                                                                                                                                                                                                        ggAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTc                                                                                                            <  1:876584/157‑1 (MQ=255)
                                                                                                                                                                                                                                 tttGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACGCCTGGGGACCATTGAAGATACCCCGGAATTATTCTTACGCCAACATAAGAACTATTTCCACTTATTCTATCCAAGCGAAg     >  1:63083/1‑251 (MQ=255)
                                                                                                                                                                                                                                  ttGTCAGATGATGACTGGACACTACTGGAAATTCATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACGCCTGGGGACCATTGAAGATACCCCGGAATTATTCTTACGCCAACATAAGAACTATTTCCACTTATTCTATCCAAGCGAAGc    <  1:620303/251‑1 (MQ=255)
                                                                                                                                                                                                                                   tGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACGCCtggggac                                                                            >  1:241233/1‑172 (MQ=255)
                                                                                                                                                                                                                                    gTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACGCCTGGGGACCATTGAAGATACCCCGGAATTATTCTTACGCCAACATAAGAACTATTTCCACTTATTCTATCCAAGCGAAGCaa  >  1:834854/1‑251 (MQ=255)
                                                                                                                                                                                                                                        gatgatGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACGCCTGGGGACCAttg                                                                       <  1:796907/178‑3 (MQ=255)
                                                                                                                                                                                                                                        gatgatGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCGATTATATTCCGTTGCATGAACGCCTGGGGACCATTGAAGATACCCCGGAATTATTCTTACGCCAACATAAGaac                                 >  1:843645/1‑215 (MQ=255)
                                                                                                                                                                                                                                             tgaCTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACAAGCGGTCATTTGCGGGAAAAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTAGTCg                                                                                                           <  1:560036/137‑1 (MQ=255)
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                             
TTTTGCTCGGGCGTTAGCCAAGTATCGCGGGGATTATATCAGTGATACCAAACCAATTTTATCTGCGGTATTACCGAACGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACCGGACACTACTGGAAATTTATCATAAGGGCGATTATGCGGAATTTCTTAAACAAGCGGTTATCTGCGGGAAGAATATTGTGATTGCCGGGGAAACCGGCTCCGGGAAAACCACTTTAATGAAAGCCCTGGTCGATTATATTCCGTTGCATGAACGCCTAGGCACCATCGAAGATACTCCGGAATTATTCTTACGCCAACATAAGAATTATTTCCACTTATTCTATCCAAGCGAAGCAA  >  1/1203111‑1203589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑