Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,203,188	A→C	intergenic (+43608/+217749)	unknown → / ← unknown	tRNA‑Val‑GAC/tRNA‑Met‑CAT

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,203,188	0	A	C	100.0%	170.7 / NA	65	intergenic (+43608/+217749)	unknown/unknown	tRNA‑Val‑GAC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (35/30);  total (35/30)

CTTCCGGCGATGTATCAATTTTACTTCATGCCAATAAATTATTCGGAGAATTGCTCGAAGACGAAGCCATTACAAAAATTGCGATTAATCGCCCCGGTGAAATTTTCTTTGAAAAAAAAGGCGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTCGGGCGTTAGCCAAGTATCGCGGGGATTATATCAGTGATACCAAACCAATTTTATCTGCGGTATTACCGAACGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACCGGACACTACTGGAAATTTATCATAAGGGCGATTATGCGGAATTTCTTAAACA  >  1/1202939‑1203404                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                         ctTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTAC‑‑‑AGTTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCgg                                                                                                                                                                                                                       >  1:415731/1‑250 (MQ=255)            gTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGa                                                                                                                                                                                                               >  1:884028/1‑250 (MQ=255)            gTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGa                                                                                                                                                                                                               >  1:236705/1‑250 (MQ=255)              aTCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGacac                                                                                                                                                                                                            <  1:675703/251‑1 (MQ=255)                cAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAg                                                                                                                                                                                                          >  1:422789/1‑251 (MQ=255)                  aTTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGat                                                                                                                                                                                                        <  1:324075/251‑1 (MQ=255)                  aTTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGat                                                                                                                                                                                                        <  1:351912/251‑1 (MQ=255)                  aTTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGat                                                                                                                                                                                                        >  1:49024/1‑251 (MQ=255)                                                     gCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTAttc                                                                                                                                                                                                   >  1:563325/1‑221 (MQ=255)                                                       ccGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAACCCGATTTTATCTGCGGTATTCCCGACGGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGt                                                                                                                                                                   <  1:183477/250‑1 (MQ=255)                                                              cGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTAAACAAAAAGGTGTATGGCATTATCAAGACGCCCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCTTTAGCCAAGTATCGTGGGGATTATATCAGTGATACAAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACgg                                                                                                                                                            <  1:516806/251‑1 (MQ=255)                                                              cGAAGCAATAACAGAAAGTGCGATTAATCGCCCGGGTGAAATTTTTTTTAAACAAAAGGGTGTATGGCATTATAAAGACGCTCCGCATATTACTTATGATTTATGTGTTTCTTTTGCTAGGGCGTTAGCCAAGTATGGTGGGAATTATATCAGTGATACAAAACGGTTTTTATCGGCGGTATTCCCGCCCGGGGAGCGGACACAGATTATTCTCCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACgg                                                                                                                                                            <  1:313833/251‑1 (MQ=255)                                                                 aGCCATTACAGAAATTGCGATTAATCGACCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGGTTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACgggg                                                                                                                                                          >  1:81625/1‑248 (MQ=255)                                                                   ccATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGa                                                                                                                                                                                   <  1:242152/223‑1 (MQ=255)                                                                                      tAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTAGGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTTTTTTGCTAGGGCGTTAGCCAAGTATCGGGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGGGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCttttt                                                                                                                                    <  1:148260/251‑1 (MQ=255)                                                                                           gtcccGGTAAAATTTTCTTTGAAAAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTATTTATGTTTTATGTGTTTTTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGTTTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCtttttt                                                                                                                                   <  1:824531/245‑1 (MQ=255)                                                                                             cccGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGAc                                                                                                                               >  1:219327/1‑249 (MQ=255)                                                                                                     aaTTTTCTTTAAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTATTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGattatt                                                                                                                     <  1:667276/251‑1 (MQ=255)                                                                                                                 acaaaaaGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACg                                                                                                         >  1:410046/3‑251 (MQ=255)                                                                                                                    aaagggtgTATGGCATTATCAAGACTCTGCGAATATTTCTTATGATTTGTGTGATTCTTTTGCTAGGGGGTTAGCAAAGTATCGTGGGGATTATATCAGTGATACTAATCCGATTTTATCGGCGGTATTGCCGACCGGCGAGCGGACAGATATTATTCTCCGGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCt                                                                                                      <  1:862818/244‑1 (MQ=255)                                                                                                                    aaaaGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGAttatta                                                                                                                    >  1:164953/1‑237 (MQ=255)                                                                                                                    aaaaGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACgg                                                                                                        >  1:703281/1‑249 (MQ=255)                                                                                                                    aaaaGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACgg                                                                                                        >  1:549671/1‑249 (MQ=255)                                                                                                                           gTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTc                                                                                                                                         >  1:192166/1‑209 (MQ=255)                                                                                                                                gCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTAc                                                                                                                                                              >  1:855724/1‑183 (MQ=255)                                                                                                                                    tATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGAttatta                                                                                                                    >  1:822154/1‑221 (MQ=255)                                                                                                                                    tATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTAt                                                                                      >  1:840678/1‑251 (MQ=255)                                                                                                                                    tATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTAt                                                                                      >  1:91388/1‑251 (MQ=255)                                                                                                                                    tATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGGGGGGATTATATCAGTGATACTAAACCGTTTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTc                                                                                                                                         <  1:210551/200‑1 (MQ=255)                                                                                                                                     aTCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTAt                                                                                      >  1:601011/1‑250 (MQ=255)                                                                                                                                        aaGACGCTCCGCATATTATTTATGATTTATGTGTTTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGTTTATATCAGTGATACAAAACCGTTTTTATCTGCGGTATTACCGACCGGCGAGGGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGt                                                                                                                                                                   <  1:219757/170‑1 (MQ=255)                                                                                                                                             gCTCCGCATATTACTTATGATTTATGTGATTTTTTTGCTAGGGCGTTAGCAAAGTATCGGGGGGATTATATCAGTGATACTAAACCGTTTTTATCTGCGGTATTCCCGACGGGGGGGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTAc                                                                                                                                                              <  1:371532/170‑1 (MQ=255)                                                                                                                                                ccGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCTAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGaaaa                                                                          >  1:260284/1‑251 (MQ=255)                                                                                                                                                  gCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTAc                                                                                                                   >  1:107738/1‑208 (MQ=255)                                                                                                                                                     tattatTTATGTTTTATGTGATTTTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCGGTGATCCTAAACCTATTTTATCTGCGGTATTACCGCCCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAAc                                                                                                                                                   <  1:773714/173‑1 (MQ=255)                                                                                                                                                       ttatttATGTTTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACAAAACCGTTTTTATCTGCGGTATTCCCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTAc                                                                                                                   <  1:568366/199‑1 (MQ=255)                                                                                                                                                       ttACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTAttc                                                                                                                                                                                                   >  1:168994/1‑123 (MQ=255)                                                                                                                                                         agttATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGAc                                                                                >  1:587945/3‑236 (MQ=255)                                                                                                                                                          tttATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAACCCGATTTTATCTGCGGTATTACCGCCCGGCGGGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTAc                                                                                                                   <  1:624721/199‑1 (MQ=255)                                                                                                                                                               gATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGAc                                                                                >  1:807235/1‑230 (MQ=255)                                                                                                                                                                  ttATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTAc                                                                                                                                                              >  1:849132/1‑149 (MQ=255)                                                                                                                                                                           tCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTc                                                                 >  1:26571/1‑233 (MQ=255)                                                                                                                                                                            cTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTAc                                                                                                                   >  1:316279/1‑182 (MQ=255)                                                                                                                                                                             ttttGCTAGGGCGTTAGCCAAGTATCGGGGGGATTATATCAGTGATACTAAACCGATTTTATCGGCGGTATTACCGCCCGGCGAGCGGACACAGATTTTTCTCCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACactac                                             <  1:476477/251‑1 (MQ=255)                                                                                                                                                                                   acGGGCGTTAGCCAGGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACGGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGaa                                        <  1:575718/249‑1 (MQ=255)                                                                                                                                                                                      ggCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAAttt                                    >  1:893816/1‑251 (MQ=255)                                                                                                                                                                                            aGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGTTTTTATCTGCGGTATTACCGACCGGCGAGCGGACAAAATTTATTCTCCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGAc                                                       <  1:136030/226‑1 (MQ=255)                                                                                                                                                                                             gCCAAGTATCGTGGGGATTATATCAGTGATACTAACCCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTCCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGaaa                                                                           <  1:866800/205‑1 (MQ=255)                                                                                                                                                                                               cAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGaa                                        <  1:852425/238‑1 (MQ=255)                                                                                                                                                                                                aaGTATGGTGGGGATTATATCAGTGATACTAACCCTTTTTTATCTGCGGTATTACCGCCCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAggg                          <  1:109856/251‑1 (MQ=255)                                                                                                                                                                                                            gATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGAt                      >  1:263312/1‑243 (MQ=255)                                                                                                                                                                                                            gATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTAt                   >  1:353341/1‑246 (MQ=255)                                                                                                                                                                                                            gATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGa              >  1:841119/1‑251 (MQ=255)                                                                                                                                                                                                             aTTATATAAGTGATACTAAACCGTTTTTATCTGCGGTATTCCCGACGGGCGAGCGGACACAGATTTTTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGaa             <  1:240064/251‑1 (MQ=255)                                                                                                                                                                                                              ttATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAAt            >  1:648888/1‑251 (MQ=255)                                                                                                                                                                                                                atatCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGCCCGGCGGGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGaa                                        <  1:692709/221‑1 (MQ=255)                                                                                                                                                                                                                atatCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCTGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAAtt           >  1:343047/1‑250 (MQ=255)                                                                                                                                                                                                                atatCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACactac                                             <  1:886079/216‑1 (MQ=255)                                                                                                                                                                                                                atatCAGTGATACAAAACCGATTTTATCTGCGGTATTCCCGCCCGGCGAGCGGACACAGATTATTCTCCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGAttatta                                                                                                                    <  1:566053/145‑1 (MQ=255)                                                                                                                                                                                                                    cAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACactac                                             >  1:723338/1‑212 (MQ=255)                                                                                                                                                                                                                      gTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTaaa    >  1:635848/1‑251 (MQ=255)                                                                                                                                                                                                                       tGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTCCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAAc   <  1:186552/251‑1 (MQ=255)                                                                                                                                                                                                                         aTACTAAACCGATTTTATCTGCGGTATTCCCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACa  <  1:619725/250‑1 (MQ=255)                                                                                                                                                                                                                                                gTATTCCCGACCGGCGAGCGGACAAAGATTTTTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGaa                                        <  1:75492/189‑1 (MQ=255)                                                                                                                                                                                                                                                  aTTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGacac                                                >  1:316800/1‑179 (MQ=255)                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                         CTTCCGGCGATGTATCAATTTTACTTCATGCCAATAAATTATTCGGAGAATTGCTCGAAGACGAAGCCATTACAAAAATTGCGATTAATCGCCCCGGTGAAATTTTCTTTGAAAAAAAAGGCGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTCGGGCGTTAGCCAAGTATCGCGGGGATTATATCAGTGATACCAAACCAATTTTATCTGCGGTATTACCGAACGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACCGGACACTACTGGAAATTTATCATAAGGGCGATTATGCGGAATTTCTTAAACA  >  1/1202939‑1203404

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑