| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,203,159 | C→T | intergenic (+43579/+217778) | unknown → / ← unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,203,159 | 0 | C | T | 92.9% | 155.1 / ‑3.7 | 70 | intergenic (+43579/+217778) | unknown/unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (37/28); minor base A (0/5); total (37/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.96e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTATAAATAATGGTCATAAACTCTTCCGGCGATGTATCAATTTTACTTCATGCCAATAAATTATTCGGAGAATTGCTCGAAGACGAAGCCATTACAAAAATTGCGATTAATCGCCCCGGTGAAATTTTCTTTGAAAAAAAAGGCGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTCGGGCGTTAGCCAAGTATCGCGGGGATTATATCAGTGATACCAAACCAATTTTATCTGCGGTATTACCGAACGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACCGGACACTACTGGAAATTTATCATAAGGGCGATTATGCGGAATTTCTTAAACA > 1/1202917‑1203404 | gTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATactaaaccgat > 1:147748/1‑248 (MQ=255) accatGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTAt > 1:553197/4‑250 (MQ=255) ccATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTa > 1:497850/2‑251 (MQ=255) ccATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTa > 1:41684/2‑251 (MQ=255) cATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTAt < 1:38515/251‑1 (MQ=255) aaaCTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTAc < 1:501238/251‑1 (MQ=255) aaaCTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTAc < 1:743598/251‑1 (MQ=255) ctTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGacc < 1:760758/251‑3 (MQ=255) ctTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTAC‑‑‑AGTTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCgg > 1:415731/1‑250 (MQ=255) gTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATactaaac > 1:827752/1‑214 (MQ=255) gTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGa > 1:884028/1‑250 (MQ=255) gTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGa > 1:236705/1‑250 (MQ=255) aTCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGacac < 1:675703/251‑1 (MQ=255) cAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAg > 1:422789/1‑251 (MQ=255) aTTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGat > 1:49024/1‑251 (MQ=255) aTTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGat < 1:324075/251‑1 (MQ=255) aTTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGat < 1:351912/251‑1 (MQ=255) gCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTAttc > 1:563325/1‑221 (MQ=255) ccGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAACCCGATTTTATCTGCGGTATTCCCGACGGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGt < 1:183477/250‑1 (MQ=255) cGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTAAACAAAAAGGTGTATGGCATTATCAAGACGCCCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCTTTAGCCAAGTATCGTGGGGATTATATCAGTGATACAAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACgg < 1:516806/251‑1 (MQ=255) cGAAGCAATAACAGAAAGTGCGATTAATCGCCCGGGTGAAATTTTTTTTAAACAAAAGGGTGTATGGCATTATAAAGACGCTCCGCATATTACTTATGATTTATGTGTTTCTTTTGCTAGGGCGTTAGCCAAGTATGGTGGGAATTATATCAGTGATACAAAACGGTTTTTATCGGCGGTATTCCCGCCCGGGGAGCGGACACAGATTATTCTCCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACgg < 1:313833/251‑1 (MQ=255) aGCCATTACAGAAATTGCGATTAATCGACCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGGTTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACgggg > 1:81625/1‑248 (MQ=255) ccATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGa < 1:242152/223‑1 (MQ=255) tAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTAGGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTTTTTTGCTAGGGCGTTAGCCAAGTATCGGGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGGGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCttttt < 1:148260/251‑1 (MQ=255) gtcccGGTAAAATTTTCTTTGAAAAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTATTTATGTTTTATGTGTTTTTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGTTTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCtttttt < 1:824531/245‑1 (MQ=255) cccGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGAc > 1:219327/1‑249 (MQ=255) aaTTTTCTTTAAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTATTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGattatt < 1:667276/251‑1 (MQ=255) acaaaaaGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACg > 1:410046/3‑251 (MQ=255) aaagggtgTATGGCATTATCAAGACTCTGCGAATATTTCTTATGATTTGTGTGATTCTTTTGCTAGGGGGTTAGCAAAGTATCGTGGGGATTATATCAGTGATACTAATCCGATTTTATCGGCGGTATTGCCGACCGGCGAGCGGACAGATATTATTCTCCGGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCt < 1:862818/244‑1 (MQ=255) aaaaGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGAttatta > 1:164953/1‑237 (MQ=255) aaaaGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACgg > 1:703281/1‑249 (MQ=255) aaaaGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACgg > 1:549671/1‑249 (MQ=255) gtgTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATactaaac > 1:672353/3‑105 (MQ=255) gTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTc > 1:192166/1‑209 (MQ=255) gCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTAc > 1:855724/1‑183 (MQ=255) tATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGAttatta > 1:822154/1‑221 (MQ=255) tATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTAt > 1:840678/1‑251 (MQ=255) tATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTAt > 1:91388/1‑251 (MQ=255) tATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGGGGGGATTATATCAGTGATACTAAACCGTTTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTc < 1:210551/200‑1 (MQ=255) aTCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTAt > 1:601011/1‑250 (MQ=255) aaGACGCTCCGCATATTATTTATGATTTATGTGTTTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGTTTATATCAGTGATACAAAACCGTTTTTATCTGCGGTATTACCGACCGGCGAGGGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGt < 1:219757/170‑1 (MQ=255) gCTCCGCATATTACTTATGATTTATGTGATTTTTTTGCTAGGGCGTTAGCAAAGTATCGGGGGGATTATATCAGTGATACTAAACCGTTTTTATCTGCGGTATTCCCGACGGGGGGGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTAc < 1:371532/170‑1 (MQ=255) ccGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCTAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGaaaa > 1:260284/1‑251 (MQ=255) gCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTAc > 1:107738/1‑208 (MQ=255) tattatTTATGTTTTATGTGATTTTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCGGTGATCCTAAACCTATTTTATCTGCGGTATTACCGCCCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAAc < 1:773714/173‑1 (MQ=255) ttatttATGTTTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACAAAACCGTTTTTATCTGCGGTATTCCCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTAc < 1:568366/199‑1 (MQ=255) ttACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTAttc > 1:168994/1‑123 (MQ=255) agttATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGAc > 1:587945/3‑236 (MQ=255) tttATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAACCCGATTTTATCTGCGGTATTACCGCCCGGCGGGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTAc < 1:624721/199‑1 (MQ=255) gATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGAc > 1:807235/1‑230 (MQ=255) ttATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTAc > 1:849132/1‑149 (MQ=255) tCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTc > 1:26571/1‑233 (MQ=255) cTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTAc > 1:316279/1‑182 (MQ=255) ttttGCTAGGGCGTTAGCCAAGTATCGGGGGGATTATATCAGTGATACTAAACCGATTTTATCGGCGGTATTACCGCCCGGCGAGCGGACACAGATTTTTCTCCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACactac < 1:476477/251‑1 (MQ=255) acGGGCGTTAGCCAGGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACGGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGaa < 1:575718/249‑1 (MQ=255) ggCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAAttt > 1:893816/1‑251 (MQ=255) aGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGTTTTTATCTGCGGTATTACCGACCGGCGAGCGGACAAAATTTATTCTCCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGAc < 1:136030/226‑1 (MQ=255) gCCAAGTATCGTGGGGATTATATCAGTGATACTAACCCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTCCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGaaa < 1:866800/205‑1 (MQ=255) cAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGaa < 1:852425/238‑1 (MQ=255) aaGTATGGTGGGGATTATATCAGTGATACTAACCCTTTTTTATCTGCGGTATTACCGCCCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAggg < 1:109856/251‑1 (MQ=255) gATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGAt > 1:263312/1‑243 (MQ=255) gATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTAt > 1:353341/1‑246 (MQ=255) gATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGa > 1:841119/1‑251 (MQ=255) aTTATATAAGTGATACTAAACCGTTTTTATCTGCGGTATTCCCGACGGGCGAGCGGACACAGATTTTTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGaa < 1:240064/251‑1 (MQ=255) ttATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAAt > 1:648888/1‑251 (MQ=255) atatCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGCCCGGCGGGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGaa < 1:692709/221‑1 (MQ=255) atatCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCTGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAAtt > 1:343047/1‑250 (MQ=255) atatCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACactac < 1:886079/216‑1 (MQ=255) atatCAGTGATACAAAACCGATTTTATCTGCGGTATTCCCGCCCGGCGAGCGGACACAGATTATTCTCCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGAttatta < 1:566053/145‑1 (MQ=255) cAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACactac > 1:723338/1‑212 (MQ=255) gTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTaaa > 1:635848/1‑251 (MQ=255) tGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTCCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAAc < 1:186552/251‑1 (MQ=255) aTACTAAACCGATTTTATCTGCGGTATTCCCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACTGGACACTACTGGAAATTTATCATAAGGGTGATTATGCGGAATTCCTTAAACa < 1:619725/250‑1 (MQ=255) | GTATAAATAATGGTCATAAACTCTTCCGGCGATGTATCAATTTTACTTCATGCCAATAAATTATTCGGAGAATTGCTCGAAGACGAAGCCATTACAAAAATTGCGATTAATCGCCCCGGTGAAATTTTCTTTGAAAAAAAAGGCGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTCGGGCGTTAGCCAAGTATCGCGGGGATTATATCAGTGATACCAAACCAATTTTATCTGCGGTATTACCGAACGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATTACATCAACAACGGCTTTTTTAGTCGTGTTATCAAGACGGAAAATCGTTTGTCAGATGATGACCGGACACTACTGGAAATTTATCATAAGGGCGATTATGCGGAATTTCTTAAACA > 1/1202917‑1203404 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |