| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,203,052 | A→C | intergenic (+43472/+217885) | unknown → / ← unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,203,052 | 0 | A | C | 98.8% | 222.4 / NA | 84 | intergenic (+43472/+217885) | unknown/unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base C (34/49); total (34/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATTAATATTCCCCCTACGCTTTATAAGAACCAAGGGGATTTAGTGGGGATTTTTGTTGCGCGGGATATTGATTTTGGCGATGTGTACGAATTGAAACAGAAATAGGAGGTATAAATAATGGTCATAAACTCTTCCGGCGATGTATCAATTTTACTTCATGCCAATAAATTATTCGGAGAATTGCTCGAAGACGAAGCCATTACAAAAATTGCGATTAATCGCCCCGGTGAAATTTTCTTTGAAAAAAAAGGCGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTCGGGCGTTAGCCAAGTATCGCGGGGATTATATCAGTGATACCAAACCAATTTTATCTGCGGTATTACCGAACGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATT > 1/1202809‑1203289 | aTTAATATTCCGCCTACGCTTTATAAGAACCAGGGGGATTTAGTAGGGATTTTTGTTGCGCGGGATATTGATTTTGGCGATGTATACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAgg < 1:715239/251‑1 (MQ=255)aTTAATATTCCGCCTACGCTTTATAAGAACCAGGGGGATTTAGTAGGGATTTTTGTTGCGCGGGATATTGATTTTGGCGATGTATACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACGCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAgg < 1:880630/251‑1 (MQ=255) tAATATTCCGCCTACGCTTTATAAGAACCAGGGGGATTTAGTAGGGATTTTTGTTGCGCGGGATATTGATTTTGGCGATGTATACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAggtg < 1:669769/251‑3 (MQ=255) ccgccTACGCTTTATAAGAACCAGGGGGATTTAGTAGGGATTTTTGTTGCGCGGGATATTGATTTTGGCGATGTATACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTTATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGc < 1:433737/247‑1 (MQ=255) aCGCTTTATAAGAACCAGGGGGATTTAGTAGGGATTTTTGTTGCGCGGGATATTGATTTTGGCGATGTATACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCa < 1:185180/251‑1 (MQ=255) cTTTATAAGAACCAGGGGGATTTAGTAGGGATTTTTGTTGCGCGGGATATTGATTTTGGCGATGTATACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAgg < 1:17788/233‑1 (MQ=255) tttATAAGAACCAGGGGGATTTAGTAGGGATTTTTGTTGCGCGGGATATTGATTTTGGCGATGTATACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGAc < 1:161788/251‑1 (MQ=255) tataAGAACCAGGGGGATTTAGTAGGGATTTTTGTTGCGCGGGATATTGATTTTGGCGATGTATACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGc < 1:655068/251‑1 (MQ=255) tataAGAACCAGGGGGATTTAGTAGGGATTTTTGTTGCGCGGGATATTGATTTTGGCGATGTATACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGc < 1:242050/251‑1 (MQ=255) gAACCAGGGGGATTTAGTAGGGATTTTTGTTGCGCGGGATATTGATTTTGGCGATGTATACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCg > 1:224892/1‑250 (MQ=255) gggATTTAGTAGGGATTTTTGTTGCGCGGGATATTGATTTTGGCGATGTATACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTAc < 1:856679/250‑1 (MQ=255) gggATTTAGTAGGAATTTTTGTTGCGCGGGATATTGATTTTGGCGATGTATACGAATTGAAACAGAAATAGGAGGTATAAGCCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTAc < 1:204033/250‑1 (MQ=255) ggATTTAGTAGGGATTTTTGTTGCGCGGGATATTGATTTTGGCGATGTATACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTAt > 1:131032/1‑221 (MQ=255) aTTTAGTAGGGATTTTTGTTGCGCGGGATATTGATTTTGGCGATGTATACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTAt > 1:219832/1‑251 (MQ=255) tagtagGGATTTTTGTTGCGCGGGATATTGATTTTGGCGATGTATACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGAt < 1:121113/251‑1 (MQ=255) gATTTTTGTTGCGCGGGATATTGATTTTGGCGATGTATACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTAtgt < 1:537220/250‑1 (MQ=255) tttttGTTGCGCGGGATATTGATTTTGGCGATGTATACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGAt < 1:805314/251‑1 (MQ=255) ggATATTGATTTTGGCGATGTATACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAggg > 1:679777/1‑251 (MQ=255) gATATTGATTTTGGCGATGTATACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAggg > 1:122860/1‑250 (MQ=255) atatTGATTTTGGCGATGTATACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGa < 1:62863/235‑1 (MQ=255) atatTGATTTTGGCGATGTATACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCg > 1:2564/1‑251 (MQ=255) aTTTTGGCGATGTATACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGcc < 1:603482/251‑1 (MQ=255) aTTTTGGCGATGTATACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGc < 1:759927/250‑1 (MQ=255) gCGATGTATACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTa < 1:212187/250‑1 (MQ=255) cGATGTATACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTAt < 1:145376/250‑1 (MQ=255) aTGTATACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAATTTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATcgt > 1:547558/1‑250 (MQ=255) gtatACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAgg < 1:342987/167‑1 (MQ=255) gtatACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGc > 1:88072/4‑178 (MQ=255) gtatACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGc < 1:19932/175‑1 (MQ=255) gtatACGAATTGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATcgtgg > 1:732126/4‑248 (MQ=255) tGAAACAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATc < 1:624961/251‑1 (MQ=255) tGAAACAGAAATAGGAGGTATAAACAATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATc < 1:347934/251‑1 (MQ=255) cAGAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTatat < 1:264075/245‑1 (MQ=255) gAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTc > 1:375514/1‑176 (MQ=255) gAAATAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTgggg < 1:762760/236‑1 (MQ=255) aaaTAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTg < 1:698011/247‑1 (MQ=255) aaaTAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTg < 1:515903/247‑1 (MQ=255) aaaTAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTCATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTg < 1:633308/247‑1 (MQ=255) tAGGAGGTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATactaa < 1:669283/251‑4 (MQ=255) gaggTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATcgtgg < 1:838974/227‑4 (MQ=255) gTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTatat > 1:347857/1‑233 (MQ=255) gTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATc > 1:403637/1‑234 (MQ=255) gTATAAACCATGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATactaaaccgat > 1:147748/1‑248 (MQ=255) accatGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTAt > 1:614858/4‑213 (MQ=255) accatGGCCATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTAt > 1:553197/4‑250 (MQ=255) gccATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACt < 1:37971/163‑1 (MQ=255) gccATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATac > 1:603709/3‑230 (MQ=255) ccATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTa > 1:497850/2‑251 (MQ=255) ccATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTa > 1:41684/2‑251 (MQ=255) cATAAACTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTAt < 1:38515/251‑1 (MQ=255) aaaCTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATc < 1:705439/217‑1 (MQ=255) aaaCTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGa < 1:694050/222‑1 (MQ=255) aaaCTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTAc < 1:743598/251‑1 (MQ=255) aaaCTCTTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTAc < 1:501238/251‑1 (MQ=255) ctTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTg > 1:166335/1‑177 (MQ=255) ctTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGacc < 1:760758/251‑3 (MQ=255) ctTCCGGCGATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTAC‑‑‑AGTTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCgg > 1:415731/1‑250 (MQ=255) gATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGAtt > 1:323103/1‑154 (MQ=255) gATGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTg > 1:98157/1‑208 (MQ=255) aTGTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATacta < 1:500465/213‑3 (MQ=255) gTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATactaaac > 1:827752/1‑214 (MQ=255) gTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGa > 1:884028/1‑250 (MQ=255) gTATCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGa > 1:236705/1‑250 (MQ=255) aTCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTg > 1:762337/1‑203 (MQ=255) aTCAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGacac < 1:675703/251‑1 (MQ=255) cAATTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAg > 1:422789/1‑251 (MQ=255) aTTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTg < 1:116407/199‑1 (MQ=255) aTTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGat > 1:49024/1‑251 (MQ=255) aTTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGat < 1:324075/251‑1 (MQ=255) aTTTCACTCCATGCCAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGat < 1:351912/251‑1 (MQ=255) ccAATAAATTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATc > 1:605042/1‑182 (MQ=255) aaaTTATTCGGAAAATTGCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATc > 1:650460/1‑177 (MQ=255) gCTCGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTAttc > 1:563325/1‑221 (MQ=255) ccGAAGGCGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAACCCGATTTTATCTGCGGTATTCCCGACGGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGt < 1:183477/250‑1 (MQ=255) cGAAGCCATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTAAACAAAAAGGTGTATGGCATTATCAAGACGCCCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCTTTAGCCAAGTATCGTGGGGATTATATCAGTGATACAAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACgg < 1:516806/251‑1 (MQ=255) cGAAGCAATAACAGAAAGTGCGATTAATCGCCCGGGTGAAATTTTTTTTAAACAAAAGGGTGTATGGCATTATAAAGACGCTCCGCATATTACTTATGATTTATGTGTTTCTTTTGCTAGGGCGTTAGCCAAGTATGGTGGGAATTATATCAGTGATACAAAACGGTTTTTATCGGCGGTATTCCCGCCCGGGGAGCGGACACAGATTATTCTCCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACgg < 1:313833/251‑1 (MQ=255) aGCCATTACAGAAATTGCGATTAATCGACCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGGTTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACgggg > 1:81625/1‑248 (MQ=255) ccATTACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGa < 1:242152/223‑1 (MQ=255) ttACAGAAATTGCGATTAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAg < 1:670842/145‑1 (MQ=255) tAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGc > 1:26630/1‑105 (MQ=255) tAATCGTCCCGGTGAAATTTTCTTTGAACAAAAAGGTGTAGGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTTTTTTGCTAGGGCGTTAGCCAAGTATCGGGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGGGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCttttt < 1:148260/251‑1 (MQ=255) gtcccGGTAAAATTTTCTTTGAAAAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTATTTATGTTTTATGTGTTTTTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGTTTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCtttttt < 1:824531/245‑1 (MQ=255) cccGGTGAAATTTTCTTTGAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGAc > 1:219327/1‑249 (MQ=255) aaTTTTCTTTAAACAAAAAGGTGTATGGCATTATCAAGACGCTCCGCATATTATTTATGATTTATGTGATTCTTTTGCTAGGGCGTTAGCCAAGTATCGTGGGGATTATATCAGTGATACTAAACCGATTTTATCTGCGGTATTACCGACCGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGattatt < 1:667276/251‑1 (MQ=255) | ATTAATATTCCCCCTACGCTTTATAAGAACCAAGGGGATTTAGTGGGGATTTTTGTTGCGCGGGATATTGATTTTGGCGATGTGTACGAATTGAAACAGAAATAGGAGGTATAAATAATGGTCATAAACTCTTCCGGCGATGTATCAATTTTACTTCATGCCAATAAATTATTCGGAGAATTGCTCGAAGACGAAGCCATTACAAAAATTGCGATTAATCGCCCCGGTGAAATTTTCTTTGAAAAAAAAGGCGTATGGCATTATCAAGACGCTCCGCATATTACTTATGATTTATGTGATTCTTTTGCTCGGGCGTTAGCCAAGTATCGCGGGGATTATATCAGTGATACCAAACCAATTTTATCTGCGGTATTACCGAACGGCGAGCGGACACAGATTATTCTTCCGCCCGCCAGTGAACGGGAAACCATCAGTATTACGGTGCGAAAACCGAATAAGTCTTTTTTTGACCTGGATTATT > 1/1202809‑1203289 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |