| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,202,218 | A→G | intergenic (+42638/+218719) | unknown → / ← unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,202,218 | 0 | A | G | 100.0% | 217.9 / NA | 75 | intergenic (+42638/+218719) | unknown/unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (40/35); total (40/35) | |||||||||||
GATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAGCCACAACCAATTCCTACCGCAACCGCTCCAGTAGAAAATCATAGTACGACAGAGGCGTTAGATATTCCATCCGCCCCCCGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAAATGTTCAGAATACAGATACAACTGACACGGTAACTAATCAACCACCGGAACCGGCAAAAGGCGATATGTTTGAAGATAACGTCAGTACGTTTAAAGCGGGTAAAGCGCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAAAGGCACTTTTATTCAGTGTTCCTTACGCACAAAACTTGTTTCCACCGTGGCCGGCAATCTCGGCTGCGTTGTGGCAAACGATGTATATAGTGCAAACG > 1/1201972‑1202461 | gATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATg < 1:770005/250‑1 (MQ=255) tACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTc < 1:477622/251‑1 (MQ=255) cAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTc > 1:106446/1‑247 (MQ=255) aaCCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAAt < 1:494765/251‑1 (MQ=255) cacaGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGa < 1:88770/250‑1 (MQ=255) cacaGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGa < 1:467966/250‑1 (MQ=255) ggTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGa < 1:829485/246‑1 (MQ=255) ggTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACaa > 1:519502/1‑251 (MQ=255) ggTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACaa > 1:712206/1‑251 (MQ=255) ggTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACaa > 1:537536/1‑251 (MQ=255) ggTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACaa > 1:366638/1‑251 (MQ=255) ttAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAAc < 1:48056/250‑1 (MQ=255) gAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGaca < 1:117191/250‑1 (MQ=255) aatgcGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGAAGAAATCACGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAAGCATAGAACGACAGAGGCGTTAGATATGCCAACCGCCCCACGTTTAATCAAAGGATTGTATCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTaac < 1:592228/247‑2 (MQ=255) aaTTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTaac < 1:132038/251‑2 (MQ=255) aTTCGGTACGACGGTGCGTTCAAAAACATTTACGGCCCCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTaac < 1:537108/250‑2 (MQ=255) cGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTCCCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATg < 1:217931/212‑1 (MQ=255) cGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCaa > 1:892278/1‑250 (MQ=255) gTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAaccaacca > 1:50322/1‑251 (MQ=255) acgacgGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAaccac > 1:395665/1‑250 (MQ=255) ttCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCaa > 1:848378/1‑251 (MQ=255) ttcaaaaCATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATa < 1:605665/208‑1 (MQ=255) cATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGat > 1:484210/1‑251 (MQ=255) ttACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGatata < 1:264328/251‑2 (MQ=255) cccaccGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAg < 1:186330/250‑1 (MQ=255) aTTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGc < 1:762/251‑1 (MQ=255) aTTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGc < 1:399249/251‑1 (MQ=255) ccaACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAAc < 1:565268/250‑1 (MQ=255) acaACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAAc < 1:726828/251‑1 (MQ=255) caACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGc > 1:642938/1‑233 (MQ=255) aCCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGatata < 1:593475/202‑2 (MQ=255) gccTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTaacca > 1:858321/2‑165 (MQ=255) gccTACCGAAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCTTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAAc < 1:46284/241‑1 (MQ=255) tACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGAt > 1:826641/1‑202 (MQ=255) aCCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATg > 1:875313/1‑250 (MQ=255) cTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTa > 1:850764/1‑248 (MQ=255) gTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGTAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTgg > 1:93970/1‑250 (MQ=255) aaaaTCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAt < 1:436239‑M1/250‑2 (MQ=255) aaaTCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAg < 1:398173/179‑1 (MQ=255) aaaTCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtg > 1:572534‑M1/1‑248 (MQ=255) aTCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTACCGATGCCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATCCAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGCCAGTAGGTTTAAAGCAGGTAAAGCCCATAAACCCCCGGTCAATTCCACTTTACTGTTGGCattgcca > 1:711814/1‑245 (MQ=255) tCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAAttt > 1:60336/1‑234 (MQ=255) aacGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtgccatcatgt < 1:824851‑M1/249‑12 (MQ=255) cGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTaac < 1:245266/131‑2 (MQ=255) aCAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATACCGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtgccatcatgt > 1:438377‑M1/1‑235 (MQ=255) agGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtgccatcatgttaagca < 1:735888‑M1/248‑18 (MQ=255) ggCGTTAGATATGCCATCCGCCCCACGTTTAATCAATGGATTGTCTCCGGGTACTATCGATGGCGAACCGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCGGTCCGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTAc > 1:427208/1‑221 (MQ=255) gCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATa > 1:622623/1‑103 (MQ=255) ttAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtgccatcatgttaagcatgatcac < 1:53515‑M1/250‑25 (MQ=255) ttAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtgccatcatgttaagca > 1:340545‑M1/1‑226 (MQ=255) gATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtgccatcatgttaagcatgatcaccgat > 1:465065‑M1/1‑223 (MQ=255) gATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtgccatcatgttaagcatgatcaccgat > 1:762157‑M1/1‑223 (MQ=255) gCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtgccatcatgttaagcatgatcaccgattcaaccagtgca > 1:421122‑M1/1‑211 (MQ=255) cGTTTAATCAAGGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtgccatcatgttaagc < 1:851247‑M1/221‑17 (MQ=255) cGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTg > 1:118425/1‑198 (MQ=255) cGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtgccatcatgttaagcatgatcaccgattcaacc > 1:221399‑M1/1‑205 (MQ=255) cGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtgccatcatgttaagc > 1:226926‑M1/1‑205 (MQ=255) gTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtgccatcatgttaagcatgatcaccgattcaaccagtgcattatc > 1:317537‑M1/1‑188 (MQ=255) tctcCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtgccatcatgttaagcatgatcaccgattcaaccagtgcattatctactcaattagccaaacgg < 1:31311‑M1/251‑65 (MQ=255) ctcCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtgccatcatgttaagcatgatcaccgattcaaccagtgcattatctactcaattagccaaacggg > 1:443178‑M1/1‑186 (MQ=255) ctcCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtgccatcatg > 1:119367‑M1/1‑186 (MQ=255) gggTACTATCGAGGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTg < 1:552084/110‑1 (MQ=255) ggTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAgc > 1:833901/1‑143 (MQ=255) gTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtgccatcatgttaagcatgatcaccgattcaaccagtgcattatct < 1:95516‑M1/226‑47 (MQ=255) gTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACATTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtgccatcatgttaagcatgatcaccgattcaaccagtgcattatctactcaattagccaaacgggggacat > 1:204564‑M1/1‑180 (MQ=255) aCTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtgccatcatgttaagcatgatcaccgattcaaccagtgcattatctactcaattagccaaacgggggacattt < 1:312825‑M1/251‑74 (MQ=255) aCTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtgccatcatgttaagcatgatcaccgattcaaccagtgcattat > 1:628103‑M1/1‑178 (MQ=255) aTCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGa > 1:65046/1‑47 (MQ=255) aTCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGAt > 1:722007/1‑48 (MQ=255) aTCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtgccatcatgttaagcatgatcaccgattcaaccagtgcattatctactcaattagccaaacgggggacatttaat > 1:461564‑M1/1‑175 (MQ=255) ccGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtgccatcatgttaagcatgatcaccgattcaaccagtgcattatctactcaattagccaaacgggggacatttaatccgactgatacggtacaagcc < 1:846658‑M1/250‑98 (MQ=255) ccGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtgccatcatgttaagcatgatcaccgattcaaccagtgcattatctactcaattagccaaacgggggacatttaatccgactgatacggtacaagcc < 1:669835‑M1/250‑98 (MQ=255) ccGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtgccatcatgttaagcatgatcaccgattcaaccagtgcattatctactcaattagccaaacgggggacatttaatccgactgatacggtacaagc < 1:14698‑M1/249‑97 (MQ=255) gTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtgccatcatgttaagcatgatcaccgattcaaccagtgcattatctactcaattagccaaacgggggacatttaatccgactgatacggtacaagcc > 1:199476‑M1/1‑151 (MQ=255) tttCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAtgccatcatgttaagcatgatcaccgattcaaccagtgcattatctactcaattagccaaacgggggacatttaatccgactgatacggtacaagccgg > 1:564717‑M1/1‑150 (MQ=255) | GATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAGCCACAACCAATTCCTACCGCAACCGCTCCAGTAGAAAATCATAGTACGACAGAGGCGTTAGATATTCCATCCGCCCCCCGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAAATGTTCAGAATACAGATACAACTGACACGGTAACTAATCAACCACCGGAACCGGCAAAAGGCGATATGTTTGAAGATAACGTCAGTACGTTTAAAGCGGGTAAAGCGCATAAACTCCCGGTCAATGCCAATTTACTGTTGGCAAAAGGCACTTTTATTCAGTGTTCCTTACGCACAAAACTTGTTTCCACCGTGGCCGGCAATCTCGGCTGCGTTGTGGCAAACGATGTATATAGTGCAAACG > 1/1201972‑1202461 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |