| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,202,091 | T→G | intergenic (+42511/+218846) | unknown → / ← unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,202,091 | 0 | T | G | 100.0% | 223.3 / NA | 77 | intergenic (+42511/+218846) | unknown/unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (39/38); total (39/38) | |||||||||||
CGGAAACCGATTATCAACCGGAAGTCAGCAAAATTGCCAAACGCGGTAAAAACCAAAATCTATTTATTTTTCTGATTATTGCACTGCTTGCCGTGGCGTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAGCCACAACCAATTCCTACCGCAACCGCTCCAGTAGAAAATCATAGTACGACAGAGGCGTTAGATATTCCATCCGCCCCCCGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAAATGTTCAGAATACAGATACAACTGACACGGTAACTAATCAACCACCGGAACCGGCAAAAGGCGATATGTTTGAAGATAACGTCAGTACGTTTAAAGCGGGTAAAGCGCATAAAC > 1/1201844‑1202332 | cGGAAACCGATTATCAACCGGAAGTCAGCAAAATTGCCAAACGCGGTAAAAACCAAAATCTATTTATTTTTCTGATTATTGCACTGCTTGCCGTGGCGTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCt < 1:148901/251‑1 (MQ=255) ccAAACGCGGTAAAAACCAAAATCTATTTATTTTTCTGATTATTGCACTGCTTGCCGTGGCGTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGAc < 1:822487/250‑1 (MQ=255) cgGTAAAAACCAAAATCTATTTATTTTTCTGATTATTGCACTGCTTGCCGTGGCGTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCg < 1:717041/250‑1 (MQ=255) aaaaCCAAAATCTATTTATTTTTCTGATTATTGCACTGCTTGCCGTGGCGTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGat < 1:830719/251‑1 (MQ=255) aaaaCCAAAATCTATTTATTTTTCTGATTATTGCACTGCTTGCCGTGGCGTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGat < 1:648330/251‑1 (MQ=255) aaCCAAAATCTATTTATTTTTCTGATTATTGCACTGCTTGCCGTGGCGTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGatat > 1:178901/1‑251 (MQ=255) aaCCAAAATCTATTTATTTTTCTGATTATTGCACTGCTTGCCGTGGCGTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGa > 1:887704/1‑248 (MQ=255) cAAAATCTATTTATTTTTCTGATTATTGCACTGCTTGCCGTGGCGTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGatatgcc < 1:61490/251‑4 (MQ=255) aTCTATTTATTTTTCTGATTATTGCACTGCTTGCCGTGGCGTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATc > 1:188800/1‑250 (MQ=255) aTCTATTTATTTTTCTGATTATTGCACTGCTTGCCGTGGCGTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATc > 1:853096/1‑250 (MQ=255) tCTATTTATTTTTCTGATTATTGCACTGCTTGCCGTGGCGTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCg > 1:53165/1‑251 (MQ=255) ttttCTGATTATTGCACTGCTTGCCGTGGCGTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGtt < 1:571736/251‑1 (MQ=255) gATTATTGCACTGCTTGCCGTGGCGTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCa > 1:664779/1‑251 (MQ=255) ttattGCACTGCTTGCCGTGGCGTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGat > 1:518547/1‑224 (MQ=255) ttattGCACTGCTTGCCGTGGCGTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCa < 1:815096/230‑1 (MQ=255) ttattGCACTGCTTGCCGTGGCGTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGccc < 1:660980/237‑1 (MQ=255) ttattGCACTGCTTGCCGTGGCGTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCaaa > 1:763379/1‑251 (MQ=255) attGCACTGCTTGCCGTGGCGTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAgg < 1:812013/251‑1 (MQ=255) ttGCTCTGCTTGCCGTGGCGTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAgg < 1:147723/213‑1 (MQ=255) ttGCACTGCTTGCCGTGGCGTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAg < 1:241651/192‑1 (MQ=255) cTGCTTGCCGTGGCGTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGt > 1:51334/1‑250 (MQ=255) gCTTGCCGTGGCGTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGCTTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGtct > 1:737058/1‑250 (MQ=255) ggCGTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATc < 1:579407/229‑1 (MQ=255) gTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCa > 1:774243/1‑208 (MQ=255) tttttGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCg < 1:845213/250‑1 (MQ=255) gggTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAgg < 1:159999/188‑1 (MQ=255) gggTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGa > 1:721287/1‑195 (MQ=255) gggTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCg > 1:204104/1‑251 (MQ=255) aTTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGatatgcc > 1:878165/1‑193 (MQ=255) tCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCACAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGtt > 1:415863/1‑251 (MQ=255) ttGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGc < 1:161281/251‑1 (MQ=255) aaGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGtct < 1:487867/210‑1 (MQ=255) ggATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGccccacg > 1:715761/1‑186 (MQ=255) gATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATg < 1:770005/250‑1 (MQ=255) tACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTc < 1:477622/251‑1 (MQ=255) cAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTc > 1:106446/1‑247 (MQ=255) aaCCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAAt < 1:494765/251‑1 (MQ=255) ggCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTAc > 1:868652/1‑204 (MQ=255) gCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCGATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTAt < 1:791342/206‑1 (MQ=255) gCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAgg > 1:811604/1‑151 (MQ=255) cacaGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGa < 1:88770/250‑1 (MQ=255) cacaGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGa < 1:467966/250‑1 (MQ=255) aGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTAc > 1:660966/1‑219 (MQ=255) ggTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCTGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGt > 1:232463/1‑172 (MQ=255) ggTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTcc > 1:114553/1‑120 (MQ=255) ggTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGt > 1:481830/1‑172 (MQ=255) ggTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCggg > 1:66401/1‑195 (MQ=255) ggTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGa < 1:829485/246‑1 (MQ=255) ggTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACaa > 1:712206/1‑251 (MQ=255) ggTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACaa > 1:537536/1‑251 (MQ=255) ggTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACaa > 1:519502/1‑251 (MQ=255) ggTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACaa > 1:366638/1‑251 (MQ=255) ttAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAAc < 1:48056/250‑1 (MQ=255) gAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGc > 1:46622/1‑215 (MQ=255) gAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGaca < 1:117191/250‑1 (MQ=255) aatgcGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGAAGAAATCACGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAAGCATAGAACGACAGAGGCGTTAGATATGCCAACCGCCCCACGTTTAATCAAAGGATTGTATCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTaac < 1:592228/247‑2 (MQ=255) aaTTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTaac < 1:132038/251‑2 (MQ=255) aTTCGGTACGACGGTGCGTTCAAAAACATTTACGGCCCCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTaac < 1:537108/250‑2 (MQ=255) cGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTCCCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATg < 1:217931/212‑1 (MQ=255) cGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCaa > 1:892278/1‑250 (MQ=255) gTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAaccaacca > 1:50322/1‑251 (MQ=255) acgacgGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAaccac > 1:395665/1‑250 (MQ=255) gCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAgaa > 1:676221/1‑102 (MQ=255) ttCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCaa > 1:848378/1‑251 (MQ=255) ttcaaaaCATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATa < 1:605665/208‑1 (MQ=255) cATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGcc > 1:529468/1‑179 (MQ=255) cATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGat > 1:484210/1‑251 (MQ=255) ttACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGatata < 1:264328/251‑2 (MQ=255) cccaccGGCAGAAATCCCGGCGATTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAg < 1:186330/250‑1 (MQ=255) aTTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGc < 1:399249/251‑1 (MQ=255) aTTTTAAATCCGGAACCACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGc < 1:762/251‑1 (MQ=255) accACAACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGc > 1:714805/2‑132 (MQ=255) ccaACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAAc < 1:565268/250‑1 (MQ=255) acaACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGCAGGTAAAGCCCATAAAc < 1:726828/251‑1 (MQ=255) caACCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGATATATTTGAAGATAACGTCAGTACGTTTAAAGc > 1:642938/1‑233 (MQ=255) aCCAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAGATGTTCAGAATACAGATACAACTGACACGGTAACTAACCAACCACCGGAACCGGCAAAAGGCGatata < 1:593475/202‑2 (MQ=255) ccAATGCCTACCGCAACCGCTCCAGTAGAAAATCATAGAACGACAGAGGCGTTAGATATGCCATCCGCCCCACGTTTAATCAAAGGATTGTCTCCGGGTACTAt > 1:575630/1‑104 (MQ=255) | CGGAAACCGATTATCAACCGGAAGTCAGCAAAATTGCCAAACGCGGTAAAAACCAAAATCTATTTATTTTTCTGATTATTGCACTGCTTGCCGTGGCGTTTTTGGGTTATTCCTTTTTGAATAAAAAGGATACGCAACCGGCACAGGTTAAGGAAAAAGAAGAATTCGGTACGACGGTGCGTTCAAAAACATTTACGGCACCACCGGCAGAAATCCCGGCGATTTTAAATCCGGAGCCACAACCAATTCCTACCGCAACCGCTCCAGTAGAAAATCATAGTACGACAGAGGCGTTAGATATTCCATCCGCCCCCCGTTTAATCAAAGGATTGTCTCCGGGTACTATCGATGGCGAAACGTTACAAGCCGTTTCAAATGTTCAGAATACAGATACAACTGACACGGTAACTAATCAACCACCGGAACCGGCAAAAGGCGATATGTTTGAAGATAACGTCAGTACGTTTAAAGCGGGTAAAGCGCATAAAC > 1/1201844‑1202332 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |