Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,199,254 G→T intergenic (+39674/+221683) unknown → / ← unknown tRNA‑Val‑GAC/tRNA‑Met‑CAT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,199,2540GT100.0% 152.2 / NA 56intergenic (+39674/+221683)unknown/unknowntRNA‑Val‑GAC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (33/23);  total (33/23)

GTATCGATTCTTTCGTTATTCAGTTATTGGATTCAGTTAGTCAATCTATGAGTAGCAATTTTGCTAACTCACTTTTTACAATTATTGGCGTAACACTGACAATTTACTTTTTAGGAAAAGGATTTGCCGTAATATCTGGCAAGATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGCCACAAAAATGATCATTGTAGCATTTATGATGAATTATGGAGGGTATCTGGATAACTCTTTAGCGATAATTGATGATCTCAAAACTAGCTTAACCGGCTTTACCGGAAACGGTATAGCCGGTTTAATGGATGACCAATTGGAATTAGGATCGGATATTGCTGGTCAACTCTTTGATCTAGATAAATCTAAATATGTCCCCTTAGAAGGTGGAATTGCTTCATTTCTTGCCTGGATTGGTGTAGCAGTATCTTTATTTGTGCCATTTATTATTTTTATTACTACAACTATCACATTAAAACTATTG  >  1/1199012‑1199496
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                  
gTATCGATTCTTTCGTTATTCAGTTACTAGATTCAGTTAGTCAATCTATGAGTAGCAGTTTTGCCAGCTCACTTTTTACAATTATTGGCATGACACTGACAATTTACTTTTTAGGAAAAGGATTTGCCGTAATATCTGGCAAAATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAAtt                                                                                                                                                                                                                                            >  1:561047/1‑251 (MQ=255)
 tATCGATTCTTTCGTTATTCAGTTACTAGATTCAGTTAGTCAATCTATGAGTAGCAGTTTTGCCAGCTCACTTTTTACAATTATTGGCATGACACTGACAATTTACTTTTTAGGAAAAGGATTTGCCGTAATATCTGGCAAAATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAAt                                                                                                                                                                                                                                             <  1:775996/249‑1 (MQ=255)
 tATCGATTCTTTCGTTATTCAGTTACTAGATTCAGTTAGTCAATCTATGAGTAGCAGTTTTGCCAGCTCACTTTTTACAATTATTGGCATGACACTGACAATTTACTTTTTAGGAAAAGGATTTGCCGTAATATCTGGCAAAATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATtg                                                                                                                                                                                                                                           >  1:383339/1‑251 (MQ=255)
            tCGTTATTCAGTTACTAGATTCAGTTAGTCAATCTATGAGTAGCAGTTTTGCCAGCTCACTTTTTACAATTATTGGCATGACACTGACAATTTACTTTTTAGGAAAAGGATTTGCCGTAATATCTGGCAAAATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTaaa                                                                                                                                                                                                                                >  1:223851/1‑251 (MQ=255)
                         actagATTCAGTTAGTCAATCTATGAGTAGCAGTTTTGCCAGCTCACTTTTTACAATTATTGGCATGACACTGACAATTTACTTTTTAGGAAAAGGATTTGCCGTAATATCTGGCAAAATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATtgatg                                                                                                                                                                                                                                        >  1:484124/5‑230 (MQ=255)
                                    ttAGTCAATCTATGAGTAGCAGTTTTGCCAGCTCACTTTTTACAATTATTGGCATGACACTGACAATTTACTTTTTAGGAAAAGGATTTGCCGTAATATCTGGCAAAATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttc                                                                                                                                                                                                           <  1:26449‑M1/248‑17 (MQ=255)
                                       gTCAATCTATGAGTAGCAGTTTTGCCAGCTCACTTTTTACAATTATTGGCATGACACTGACAATTTACTTTTTAGGAAAAGGATTTGCCGTAATATCTGGCAAAATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAAc                                                                                                                                                                                                                              <  1:486337/226‑1 (MQ=255)
                                       gTCAATCTATGAGTAGCAGTTTTGCCAGCTCACTTTTTACAATTATTGGCATGACACTGACAATTTACTTTTTAGGAAAAGGATTTGCCGTAATATCTGGCAAAATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataa                                                                                                                                                                                                     >  1:218607‑M1/1‑229 (MQ=255)
                                           aTCTATGAGTAGCAGTTTTGCCAGCTCACTTTTTACAATTATTGGCATGACACTGACAATTTACTTTTTAGGAAAAGGATTTGCCGTAATATCTGGCAAAATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAAc                                                                                                                                                                                                                              <  1:605751/222‑1 (MQ=255)
                                           aTCTATGAGTAGCAGTTTTGCCAGCTCACTTTTTACAATTATTGGCATGACACTGACAATTTACTTTTTAGGAAAAGGATTTGCCGTAATATCTGGCAAAATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacaca                                                                                                                                                                                                 >  1:649167‑M1/1‑225 (MQ=255)
                                            tCTATGAGTAGCAGTTTTGCCAGCTCACTTTTTACAATTATTGGCATGACACTGACAATTTACTTTTTAGGAAAAGGATTTGCCGTAATATCTGGCAAAATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaa                                                                                                                                                                                                >  1:291681‑M1/1‑224 (MQ=255)
                                                           tttgccagctcacttttTACAATTATTGGCATGACACTGACAATTTACTTTTTAGGAAAAGGATTTGCCGTAATATCTGGCAAAATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatg                                                                                                                                                                                 <  1:710751‑M1/243‑43 (MQ=255)
                                                                       cTTTTTACAATTATTGGCATGACACTGACAATTTACTTTTTAGGAAAAGGATTTGCCGTAATATCTGGCAAAATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAAc                                                                                                                                                                                                                              >  1:151066/1‑194 (MQ=255)
                                                                           ttACAATTATTGGCATGACACTGACAATTTACTTTTTAGGAAAAGGATTTGCCGTAATATCTGGCAAAATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAAc                                                                                                                                                                                                                              >  1:871753/1‑190 (MQ=255)
                                                                              cAATTATTGGCATGACACTGACAATTTACTTTTTAGGAAAAGGATTTGCCGTAATATCTGGCAAAATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATtgat                                                                                                                                                                                                                                         >  1:236837/1‑176 (MQ=255)
                                                                                attattGGCATGACACTGACAATTTACTTTTTAGGAAAAGGATTTGCCGTAATATCTGGCAAAATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgatagg                                                                                                                                                            <  1:224522‑M1/251‑64 (MQ=255)
                                                                                attattGGCATGACACTGACAATTTACTTTTTAGGAAAAGGATTTGCCGTAATATCTGGCAAAATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgatagg                                                                                                                                                            >  1:54768‑M1/1‑188 (MQ=255)
                                                                                   attGGCATGACACTGACAATTTACTTTTTAGGAAAAGGATTTGCCGTAATATCTGGCAAAATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggagg                                                                                                                                                         >  1:138048‑M1/1‑185 (MQ=255)
                                                                                    ttggcatgacactgacaattTACTTTTTAGGAAAAGGATTTGCCGTAATATCTGGCAAAATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggc                                                                                                                                                        <  1:37942‑M1/243‑68 (MQ=255)
                                                                                       gcatgacacTGACAATTTACTTTTTAGGAAAAGGATTTGCCGTAATATCTGGCAAAATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAAc                                                                                                                                                                                                                              >  1:836005/6‑178 (MQ=255)
                                                                                           gacacTGACAATTTACTTTTTAGGAAAAGGATTTGCCGTAATATCTGGCAAAATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGa                                                                                                                                                                                                                                                 >  1:405555/2‑155 (MQ=255)
                                                                                              acTGACAATTTACTTTTTAGGAAAAGGATTTGCCGTAACATCTGGCAAAATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaac                                                                                                                                              <  1:90798‑M1/251‑78 (MQ=255)
                                                                                                 gACAATTTACTTTTTAGGAAAAGGATTTGCCGTAATATCTGGCAAAATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAAc                                                                                                                                                                                                                              <  1:450193/168‑1 (MQ=255)
                                                                                                                              ccGTAATATCTGGCAAAATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaa                                                                                                              >  1:277751‑M1/1‑142 (MQ=255)
                                                                                                                              ccGTAATATCTGGCAAAATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggc                                                                                                                                                        <  1:149953‑M1/209‑68 (MQ=255)
                                                                                                                                                        ccAGCAACAGCATTAATTTATGATTTTGTCACAAAAATGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATGGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggc                                                                                                                                                        <  1:148022‑M1/183‑68 (MQ=255)
                                                                                                                                                                                         aaaaTGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgataaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacg                                                                 >  1:351355‑M1/1‑83 (MQ=255)
                                                                                                                                                                                           aaTGATTATTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaat                                                 >  1:523010‑M1/1‑81 (MQ=255)
                                                                                                                                                                                                  aTTGTGGCATTTATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaatctattta                                          >  1:826185‑M1/1‑74 (MQ=255)
                                                                                                                                                                                                           tttATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttaacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaatctatttatttttctgatt                                 <  1:241258‑M1/251‑187 (MQ=255)
                                                                                                                                                                                                             tATGATGAATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaatctatttatttttctgatt                               <  1:476571‑M1/251‑189 (MQ=255)
                                                                                                                                                                                                                  tgaATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaatctatttatttttctgattattgc                          <  1:386138‑M1/251‑194 (MQ=255)
                                                                                                                                                                                                                   gaATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaatctatttatttttctgattattgca                         >  1:587990‑M1/1‑57 (MQ=255)
                                                                                                                                                                                                                   gaATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaatctatttatttttctgattattgca                         >  1:609080‑M1/1‑57 (MQ=255)
                                                                                                                                                                                                                   gaATTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaat                                                                          <  1:91944‑M1/202‑146 (MQ=255)
                                                                                                                                                                                                                     aTTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaatctatttatttttctgattattgcac                        <  1:4241‑M1/250‑196 (MQ=255)
                                                                                                                                                                                                                     aTTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaatctatttatttttctgattattgca                         >  1:515339‑M1/1‑55 (MQ=255)
                                                                                                                                                                                                                     aTTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaatctatttatttttctgattattgca                         >  1:228092‑M1/1‑55 (MQ=255)
                                                                                                                                                                                                                     aTTATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaac                                                                                                                                   <  1:879531‑M1/143‑89 (MQ=255)
                                                                                                                                                                                                                      ttATGGGGGGTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggacaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaatctatttatttttctgattattgca                         >  1:438952‑M1/1‑54 (MQ=255)
                                                                                                                                                                                                                            ggggtATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaatctatttatttttctgattattgcactgc                     <  1:885011‑M1/245‑199 (MQ=255)
                                                                                                                                                                                                                             gggTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaatctatttatttttctgattattgcactgcttgcc                <  1:848174‑M1/250‑204 (MQ=255)
                                                                                                                                                                                                                               gTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaatctatttatttttctgattattgcactgcttgccgtg             >  1:100361‑M1/1‑45 (MQ=255)
                                                                                                                                                                                                                               gTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaatctatttatttttctgattattgcactgcttgccgtg             >  1:238080‑M1/1‑45 (MQ=255)
                                                                                                                                                                                                                               gTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaatctatttatttttctgattattgcactgcttgccg               <  1:142546‑M1/249‑205 (MQ=255)
                                                                                                                                                                                                                               gTATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaatctatttatt                                        >  1:600198‑M1/1‑45 (MQ=255)
                                                                                                                                                                                                                                tATCTAGATAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaatctatttatttttctgattattgc                          >  1:594226‑M1/1‑44 (MQ=255)
                                                                                                                                                                                                                                   ctagataACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaatctatttatttttctgattattgcactgcttgccgtggcgt         >  1:549450‑M1/4‑41 (MQ=255)
                                                                                                                                                                                                                                   ctagataACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaatctatttatttttctgattattgcactgcttgccgtggcgt         >  1:215261‑M1/4‑41 (MQ=255)
                                                                                                                                                                                                                                   ctagataACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaatctatttatttttctgattattgcactgcttgccgtggcgt         >  1:204509‑M1/4‑41 (MQ=255)
                                                                                                                                                                                                                                   ctagataACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaatctatttatt                                        <  1:803188‑M1/217‑180 (MQ=255)
                                                                                                                                                                                                                                   ctagataACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataac                                                                                                                                        >  1:892916‑M1/4‑41 (MQ=255)
                                                                                                                                                                                                                                     agaTAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggtaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaatctatttatttttctgattattgcactgcttgcc                <  1:98597‑M1/241‑204 (MQ=255)
                                                                                                                                                                                                                                     agaTAACTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaatctatttatttttctgattattgcactgcttgccgtggcgttt       >  1:136156‑M1/2‑39 (MQ=255)
                                                                                                                                                                                                                                          aCTCTTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaatctatttatttttctgattattgcactgcttgccgtggcgtttttggg  <  1:281989‑M1/251‑218 (MQ=255)
                                                                                                                                                                                                                                           ctctTTATCGATAATTGATGATCTTAAAACTAGttaaaacgccggtttcttataacacaaccatttcgccaaatgtggcaagagacgaacgataggaggcagagatgaacgataacaaaaccattcagccgacggatgacaaaacggaaaccgattatcaaccggaagtcagcaaaattgccaaacgcggtaaaaaccaaaatctatttatttttctgattattgcactg                      >  1:477613‑M1/1‑33 (MQ=255)
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                  
GTATCGATTCTTTCGTTATTCAGTTATTGGATTCAGTTAGTCAATCTATGAGTAGCAATTTTGCTAACTCACTTTTTACAATTATTGGCGTAACACTGACAATTTACTTTTTAGGAAAAGGATTTGCCGTAATATCTGGCAAGATTGAAGCTCCAGCAACAGCATTAATTTATGATTTTGCCACAAAAATGATCATTGTAGCATTTATGATGAATTATGGAGGGTATCTGGATAACTCTTTAGCGATAATTGATGATCTCAAAACTAGCTTAACCGGCTTTACCGGAAACGGTATAGCCGGTTTAATGGATGACCAATTGGAATTAGGATCGGATATTGCTGGTCAACTCTTTGATCTAGATAAATCTAAATATGTCCCCTTAGAAGGTGGAATTGCTTCATTTCTTGCCTGGATTGGTGTAGCAGTATCTTTATTTGTGCCATTTATTATTTTTATTACTACAACTATCACATTAAAACTATTG  >  1/1199012‑1199496

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑