Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,198,791 A→C intergenic (+39211/+222146) unknown → / ← unknown tRNA‑Val‑GAC/tRNA‑Met‑CAT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,198,7910AC100.0% 169.3 / NA 59intergenic (+39211/+222146)unknown/unknowntRNA‑Val‑GAC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (25/34);  total (25/34)

AAATCAAACGATGTAAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCGACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTCAAACGTTAAGGGCGTTATATTCAATTAATACGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTAACTTTAAGTGCTTGTTCAGAAGAAGTTAAAAGTGTGGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAGAATGTGAGAAAAAAGCCGAACCGCTGATGGCAAATTCTAATTGTCGAAACGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGTTAATTTTTCTAATTAGGTTATCATTATGAGATTCTTTGAGAGTATCGATTCTTTCGTTATTCAGTTA  >  1/1198551‑1199037
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                      
aaatctcaagATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTg                                                                                                                                                                                                                                              <  1:403913/242‑1 (MQ=255)
 aatctcaagATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTg                                                                                                                                                                                                                                              >  1:121813/9‑250 (MQ=255)
    ctcaagATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTg                                                                                                                                                                                                                                              <  1:256274/242‑1 (MQ=255)
       aagATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTc                                                                                                                                                                                                                                       <  1:742822/249‑1 (MQ=255)
          aTGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCaga                                                                                                                                                                                                                                    <  1:231767/251‑1 (MQ=255)
            gtcaaagaaagCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCagaag                                                                                                                                                                                                                                  >  1:751658/4‑251 (MQ=255)
                           gACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAg                                                                                                                                                                                                                                                <  1:34677/222‑1 (MQ=255)
                                   aaaTGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTAc                                                                                                                                                                                                           <  1:794007/251‑1 (MQ=255)
                                     aTGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTTAGAAGAGGTTAAAAGCGTAGAGTATTACaa                                                                                                                                                                                                         <  1:789229/251‑1 (MQ=255)
                                     aTGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACaa                                                                                                                                                                                                         <  1:671280/251‑1 (MQ=255)
                                     aTGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACaa                                                                                                                                                                                                         >  1:642599/1‑251 (MQ=255)
                                             gACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCagaag                                                                                                                                                                                                                                  >  1:867596/1‑218 (MQ=255)
                                             gACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATa                                                                                                                                                                                                 >  1:513579/1‑251 (MQ=255)
                                               cGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACg                                                                                                                                                                                               >  1:71402/1‑251 (MQ=255)
                                                gTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTg                                                                                                                                                                                                                                              <  1:489380/203‑1 (MQ=255)
                                                            gCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCaaa                                                                                                                                                                                  >  1:440719/1‑251 (MQ=255)
                                                             cATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGt                                                                                                                                                                                                                <  1:707196/220‑1 (MQ=255)
                                                                        caAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCagaag                                                                                                                                                                                                                                  <  1:196661/191‑1 (MQ=255)
                                                                                            aTTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGcggag                                                                                                                                                  >  1:562322/1‑247 (MQ=255)
                                                                                                 aCGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTAc                                                                                                                                                                                                           >  1:887528/1‑189 (MQ=255)
                                                                                                    cACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGcggagccattaat                                                                                                                                          <  1:397596/251‑13 (MQ=255)
                                                                                                      cGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGcggagccattaatgg                                                                                                                                        <  1:717084/251‑15 (MQ=255)
                                                                                                            aCGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCagaag                                                                                                                                                                                                                                  <  1:810910/155‑1 (MQ=255)
                                                                                                             cGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACg                                                                                                                                                                                               >  1:797689/1‑189 (MQ=255)
                                                                                                               gAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGcggagccattaatggcaaactcca                                                                                                                               >  1:6414/1‑228 (MQ=255)
                                                                                                                           ttAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGtagtaatg                                                                                                                   <  1:557632/251‑8 (MQ=255)
                                                                                                                                 aatgaGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAAt                                                                                                              <  1:319941/250‑1 (MQ=255)
                                                                                                                                                       cGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGAc                                                                                        <  1:800828/250‑1 (MQ=255)
                                                                                                                                                         tctcAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAg                                                                                                                                                                                                                        >  1:36908/1‑120 (MQ=255)
                                                                                                                                                                        aaCGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGgtg                                                                      <  1:512594/251‑1 (MQ=255)
                                                                                                                                                                          cGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTg                                                                                                                                                                                                                                              <  1:444707/81‑1 (MQ=255)
                                                                                                                                                                          cGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAg                                                                                                                                                                                                                        <  1:664226/103‑1 (MQ=255)
                                                                                                                                                                          cGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGc                                                                                                         >  1:737249/1‑214 (MQ=255)
                                                                                                                                                                          cGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGgtg                                                                      >  1:505105/1‑249 (MQ=255)
                                                                                                                                                                                  gCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCAcaagca                                                                                                  <  1:743181/213‑1 (MQ=255)
                                                                                                                                                                                  gCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGCTAAttttt                                                             >  1:229055/1‑250 (MQ=255)
                                                                                                                                                                                       atatTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGCTAATTTTTCTAAtt                                                       >  1:584480/1‑251 (MQ=255)
                                                                                                                                                                                       atatTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGCTAATTTTACTAAtt                                                       >  1:47796/1‑251 (MQ=255)
                                                                                                                                                                                         atTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAgcgt                                                                                                                                                                                                                     <  1:862852/91‑4 (MQ=255)
                                                                                                                                                                                           tCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGCTAATTTTTCTAATTAGGt                                                   <  1:326000/251‑1 (MQ=255)
                                                                                                                                                                                            caactAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGCTAATTTTTCTAATTAGGtt                                                  >  1:524314/5‑251 (MQ=255)
                                                                                                                                                                                             aactAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTc                                                                                           >  1:324995/4‑209 (MQ=255)
                                                                                                                                                                                               ctAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGCTAATTTTTCTAATTAGGTTAt                                                >  1:384385/2‑250 (MQ=255)
                                                                                                                                                                                                 aaTATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGCTAATTTTTCTAATTAGGTTATCAt                                             <  1:349590/251‑1 (MQ=255)
                                                                                                                                                                                                  atatggAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGCTAATTTTTCTAATTAGGTTATCAtt                                            <  1:649048/247‑1 (MQ=255)
                                                                                                                                                                                                                 tGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGCTAATTTTTCTAATTAGGTTATCATTATGAGATTCTTTgag                             <  1:288558/251‑1 (MQ=255)
                                                                                                                                                                                                                                  gCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGCTAATTTTTCTAATTAGGTTATCATTATgag                                       >  1:225026/1‑224 (MQ=255)
                                                                                                                                                                                                                                       atttatATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGtagt                                                                                                                       <  1:269203/139‑4 (MQ=255)
                                                                                                                                                                                                                                       atttatATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGtagt                                                                                                                       >  1:699194/1‑136 (MQ=255)
                                                                                                                                                                                                                                       atttatATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGaa                                                                                 <  1:223406/177‑1 (MQ=255)
                                                                                                                                                                                                                                       atttatATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGCTAATTTTTCTAATTAGGTTATCAt                                             <  1:325351/213‑1 (MQ=255)
                                                                                                                                                                                                                                       atttatATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGCTAATTTTTCTAATTAGGTTATCAt                                             <  1:198681/213‑1 (MQ=255)
                                                                                                                                                                                                                                       atttatATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGCTAATTTTTCTAATTAGGTTATCATTATgag                                       >  1:160224/1‑219 (MQ=255)
                                                                                                                                                                                                                                       atttatATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGCTAATTTTTCTAATTAGGTTATCATTATg                                         <  1:304672/217‑1 (MQ=255)
                                                                                                                                                                                                                                       atttatATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGCTAATTTTTCTAATTAGGTTATCATTATg                                         <  1:328825/217‑1 (MQ=255)
                                                                                                                                                                                                                                       atttatATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGCTAATTTTTCTAATTAGGTTATCATTATGAGATTCTTTGAGAGTATCGATTCTTTCGTTAtt        >  1:802634/1‑250 (MQ=255)
                                                                                                                                                                                                                                       atttatATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGCTAATTTTTCTAATTAGGTTATCATTATGAGATTCTTTGAGAGTATCGATTCTTTCGTTAtt        >  1:434107/1‑250 (MQ=255)
                                                                                                                                                                                                                                        tttatATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGtagtaatgc                                                                                                                  <  1:305992/143‑9 (MQ=255)
                                                                                                                                                                                                                                            tatTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGCTAATTTTTCTAATTAGGTTATCATTATGAGATTCTTTGAGAGTATCGATTCTTTCGTTATTCAGTTa  <  1:26331/251‑1 (MQ=255)
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                      
AAATCAAACGATGTAAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCGACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTCAAACGTTAAGGGCGTTATATTCAATTAATACGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTAACTTTAAGTGCTTGTTCAGAAGAAGTTAAAAGTGTGGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAGAATGTGAGAAAAAAGCCGAACCGCTGATGGCAAATTCTAATTGTCGAAACGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGTTAATTTTTCTAATTAGGTTATCATTATGAGATTCTTTGAGAGTATCGATTCTTTCGTTATTCAGTTA  >  1/1198551‑1199037

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑