Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,198,742	T→C	intergenic (+39162/+222195)	unknown → / ← unknown	tRNA‑Val‑GAC/tRNA‑Met‑CAT

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,198,742	0	T	C	100.0%	130.8 / NA	47	intergenic (+39162/+222195)	unknown/unknown	tRNA‑Val‑GAC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (20/27);  total (20/27)

ATCGTATGGCGAAATCAAACGATGTAAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCGACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTCAAACGTTAAGGGCGTTATATTCAATTAATACGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTAACTTTAAGTGCTTGTTCAGAAGAAGTTAAAAGTGTGGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAGAATGTGAGAAAAAAGCCGAACCGCTGATGGCAAATTCTAATTGTCGAAACGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGTTAATTTTTCTAATTAGGT  >  1/1198540‑1198988                                                                                                                                                                                                           |                                                                                                                                                                                                                                                       aacggatgacaaaatctcaagATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATAtt                                                                                                                                                                                                        <  1:157157/231‑1 (MQ=255) aacggatgacaaaatctcaagATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATAtt                                                                                                                                                                                                        <  1:869553/231‑1 (MQ=255)     gatgacaaaatctcaagATGTCAAAGAAAGCCAGGACTTATAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATAttca                                                                                                                                                                                                      >  1:181258/17‑247 (MQ=255)     gatgacaaaatctcaagATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATAttcac                                                                                                                                                                                                     <  1:434598/234‑4 (MQ=255)            aaatctcaagATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTg                                                                                                                                                                                             <  1:403913/242‑1 (MQ=255)             aatctcaagATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTg                                                                                                                                                                                             >  1:121813/9‑250 (MQ=255)                ctcaagATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTg                                                                                                                                                                                             <  1:256274/242‑1 (MQ=255)                   aagATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTc                                                                                                                                                                                      <  1:742822/249‑1 (MQ=255)                      aTGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCaga                                                                                                                                                                                   <  1:231767/251‑1 (MQ=255)                        gtcaaagaaagCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCagaag                                                                                                                                                                                 >  1:751658/4‑251 (MQ=255)                                       gACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAg                                                                                                                                                                                               <  1:34677/222‑1 (MQ=255)                                               aaaTGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTAc                                                                                                                                                          <  1:794007/251‑1 (MQ=255)                                                 aTGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAGGATGAAAAAACTTTTTATCGCATTATTTATAttcac                                                                                                                                                                                                     >  1:426833/1‑203 (MQ=255)                                                 aTGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTTAGAAGAGGTTAAAAGCGTAGAGTATTACaa                                                                                                                                                        <  1:789229/251‑1 (MQ=255)                                                 aTGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACaa                                                                                                                                                        <  1:671280/251‑1 (MQ=255)                                                 aTGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACaa                                                                                                                                                        >  1:642599/1‑251 (MQ=255)                                                         gACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCagaag                                                                                                                                                                                 >  1:867596/1‑218 (MQ=255)                                                         gACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATa                                                                                                                                                >  1:513579/1‑251 (MQ=255)                                                           cGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACg                                                                                                                                              >  1:71402/1‑251 (MQ=255)                                                            gTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTg                                                                                                                                                                                             <  1:489380/203‑1 (MQ=255)                                                                        gCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCaaa                                                                                                                                 >  1:440719/1‑251 (MQ=255)                                                                         cATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGt                                                                                                                                                               <  1:707196/220‑1 (MQ=255)                                                                                    caAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCagaag                                                                                                                                                                                 <  1:196661/191‑1 (MQ=255)                                                                                                   gATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCAttattt                                                                                                                                                                                                             >  1:339691/1‑148 (MQ=255)                                                                                                        aTTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGcggag                                                                                                 >  1:562322/1‑247 (MQ=255)                                                                                                             aCGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTAc                                                                                                                                                          >  1:887528/1‑189 (MQ=255)                                                                                                                cACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGcggagccattaat                                                                                         <  1:397596/251‑13 (MQ=255)                                                                                                                  cGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGcggagccattaatgg                                                                                       <  1:717084/251‑15 (MQ=255)                                                                                                                        aCGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCagaag                                                                                                                                                                                 <  1:810910/155‑1 (MQ=255)                                                                                                                         cGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACg                                                                                                                                              >  1:797689/1‑189 (MQ=255)                                                                                                                           gAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGcggagccattaatggcaaactcca                                                                              >  1:6414/1‑228 (MQ=255)                                                                                                                                    cGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATAttc                                                                                                                                                                                                       <  1:531042/121‑2 (MQ=255)                                                                                                                                       ttAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGtagtaatg                                                                  <  1:557632/251‑8 (MQ=255)                                                                                                                                             aatgaGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAAt                                                             <  1:319941/250‑1 (MQ=255)                                                                                                                                                                   cGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGAc                                       <  1:800828/250‑1 (MQ=255)                                                                                                                                                                     tctcAACGTCGCTTAAACGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAg                                                                                                                                                                       >  1:36908/1‑120 (MQ=255)                                                                                                                                                                                    aaCGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGgtg                     <  1:512594/251‑1 (MQ=255)                                                                                                                                                                                      cGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTg                                                                                                                                                                                             <  1:444707/81‑1 (MQ=255)                                                                                                                                                                                      cGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAg                                                                                                                                                                       <  1:664226/103‑1 (MQ=255)                                                                                                                                                                                      cGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGc                                                        >  1:737249/1‑214 (MQ=255)                                                                                                                                                                                      cGTTAAGGGCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGgtg                     >  1:505105/1‑249 (MQ=255)                                                                                                                                                                                              gCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCAcaagca                                                 <  1:743181/213‑1 (MQ=255)                                                                                                                                                                                              gCGTTATATTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGCTAAttttt            >  1:229055/1‑250 (MQ=255)                                                                                                                                                                                                   atatTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGCTAATTTTTCTAAtt      >  1:584480/1‑251 (MQ=255)                                                                                                                                                                                                   atatTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGCTAATTTTACTAAtt      >  1:47796/1‑251 (MQ=255)                                                                                                                                                                                                     atTCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAgcgt                                                                                                                                                                    <  1:862852/91‑4 (MQ=255)                                                                                                                                                                                                       tCAACTAATATGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTCACTTTAAGTGCCTGTTCAGAAGAGGTTAAAAGCGTAGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAAAATGTGAGAAAAAAGCGGAGCCATTAATGGCAAACTCCAATTGTAGTAATGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGCTAATTTTTCTAATTAGGt  <  1:326000/251‑1 (MQ=255)                                                                                                                                                                                                           |                                                                                                                                                                                                                                                       ATCGTATGGCGAAATCAAACGATGTAAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCGACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTCAAACGTTAAGGGCGTTATATTCAATTAATACGGAGTAAAAGATGAAAAAACTTTTTATCGCATTATTTATATTAACTTTAAGTGCTTGTTCAGAAGAAGTTAAAAGTGTGGAGTATTACAAAGAACATACGACTGAACGTCAAAAAATGTTAGAAGAATGTGAGAAAAAAGCCGAACCGCTGATGGCAAATTCTAATTGTCGAAACGCAAATAAAGCACAAGCAAGTATTCGACGTATGAATACTCGAGGTGTTAATTTTTCTAATTAGGT  >  1/1198540‑1198988

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑