Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,198,511	C→T	intergenic (+38931/+222426)	unknown → / ← unknown	tRNA‑Val‑GAC/tRNA‑Met‑CAT

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,198,511	0	C	T	100.0%	165.9 / NA	63	intergenic (+38931/+222426)	unknown/unknown	tRNA‑Val‑GAC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (29/34);  total (29/34)

CGCATAGTTTGTATGGTGAAATAAATGGCTTAAAATCGGAGTTTACCCCGGTAATCGATTTAGTTTCCGGTGGGAAAAACGCATTAAGCGCGAATGCTAAAAGCCTGTTTGAAAAATACAACCTTTTTGACCGTTGTAAGAATTTACGTCAAGGTGAAATTACTTCCTGTGAAGCAAATATTGTTTCCACCGTGGAAAGTATGAGCTTCTTAGATTCGTTTGAAAGTAATGTCAATAGCAAACTTAAAGCAATTGATAAGTTAGCTAATCGTATGGCGAAATCAAACGATGTAAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCGACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTCAAACGTTAAGGGCGTTATATTCAAT  >  1/1198273‑1198742                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                        cgcATAGTTTATATGGTGAAATAAATGGTTTAAAATCGGAGTTTACCCCGGTAATCGATTTAGTTTCCGGTGGGAAAAACGCATTAAGCGCGAATGCCAAAAGCCTGTTTGAAAAATACAACCTTTTTGACCGTTGTAAAAATTTGCGTCAAGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTaaattgaaaac                                                                                                                                                                                                                              <  1:719511/250‑9 (MQ=255)  gcATAGTTTATATGGTGAAATAAATGGTTTAAAATCGGAGTTTACCCCGGTAATCGATTTAGTTTCCGGTGGGAAAAACGCATTAAGCGCGAATGCCAAAAGCCTGTTTGAAAAATACAACCTTTTTGACCGTTGTAAAAATTTGCGTCAAGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTaaattgaaaacta                                                                                                                                                                                                                            >  1:757994/1‑241 (MQ=255)     tAGTTTATATGGTGAAATAAATGGTTTAAAATCGGAGTTTACCCCGGTAATCGATTTAGTTTCCGGTGGGAAAAACGCATTAAGCGCGAATGCCAAAAGCCTGTTTGAAAAATACAACCTTTTTGACCGTTGTAAAAATTTGCGTCAAGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTaaattgaaaactattg                                                                                                                                                                                                                         >  1:850073/1‑238 (MQ=255)     tAGTTTATATGGTGAAATAAATGGTTTAAAATCGGAGTTTACCCCGGTAATCGATTTAGTTTCCGGTGGGAAAAACGCATTAAGCGCGAATGCCAAAAGCCTGTTTGAAAAATACAACCTTTTTGACCGTTGTAAAAATTTGCGTCAAGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTaaattgaaaactattg                                                                                                                                                                                                                         >  1:329674/1‑238 (MQ=255)       gTTTATATGGTGAAATAAATGGTTTAAAATCGGAGTTTACCCCGGTAATCGATTTAGTTTCCGGTGGGAAAAACGCATTAAGCGCGAATGCCAAAAGCCTGTTTGAAAAATACAACCTTTTTGACCGTTGTAAAAATTTGCGTCAAGGTGAAATCACTTCTTGTGAAGCCAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTaaattgaaaactattgat                                                                                                                                                                                                                       >  1:426661/1‑236 (MQ=255)       gTTTATATGGTGAAATAAATGGTTTAAAATCGGAGTTTACCCCGGTAATCGATTTAGTTTCCGGTGGGAAAAACGCATTAAGCGCGAATGCCAAAAGCCTGTTTGAAAAATACAACCTTTTTGACCGTTGTAAAAATTTGCGTCAAGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTaaattgaaaactattgat                                                                                                                                                                                                                       >  1:299863/1‑236 (MQ=255)       gTTTATATGGTGAAATAAATGGTTTAAAATCGGAGTTTACCCCGGTAATCGATTTAGTTTCCGGTGGGAAAAACGCATTAAGCGCGAATGCCAAAAGCCTGTTTGAAAAATACAACCTTTTTGACCGTTGTAAAAATCTGCGTCAAGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTaaattgaaaactattgat                                                                                                                                                                                                                       >  1:812671/1‑236 (MQ=255)               ggTGAAATAAATGGTTTAAAATCGGAGTTTACCCCGGTAATCGATTTAGTTTCCGGTGGGAAAAACGCATTAAGCGCGAATGCCAAAAGCCTGTTTGAAAAATACAACCTTTTTGACCGTTGTAAAAATTTGCGTCAAGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATaaactcg                                                                                                                                                                                                                >  1:690135/1‑245 (MQ=255)                gTGAAATAAATGGTTTAAAATCGGAGTTTACCCCGGTAATCGATTTAGTTTCCGGTGGGAAAAACGCATTAAGCGCGAATGCCAAAAGCCTGTTTGAAAAATACAACCTTTTTGACCGTTGTAAAAATTTGCGTCAAGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTaaattga                                                                                                                                                                                                                                  >  1:96845/1‑227 (MQ=255)                     ataaatGGTTTAAAATCGGAGTTTACCCCGGTAATCGATTTAGTTTCCGGTGGGAAAAACGCATTAAGCGCGAATGCCAAAAGCCTGTTTGAAAAATACAACCTTTTTGACCGTTGTAAAAATTTGCGTCAAGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATaaactcgctaaacg                                                                                                                                                                                                         <  1:673838/251‑13 (MQ=255)                                                          aTTTAGTTTCCGGTGGGAAAAACGCATTAAGCGCGAATGCCAAAAGCCTGTTTGAAAAATACAACCTTTTTGACCGTTGTAAAAATTTGCGTCAAGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGa                                                                                                                                                                     >  1:58629/1‑250 (MQ=255)                                                                tttCCGGTGGGAAAAACGCATTAAGCGCGAATGCCAAAAGCCTGTTTGAAAAATACAACCTTTTTGACCGTTGTAAAAATTTGCGTCAAGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTaaaa                                                                                                                                                              <  1:805680/251‑1 (MQ=255)                                                                      gTGGGAAAAACGCATTAAGCGCGAATGCCAAAAGCCTGTTTGAAAAATACAACCTTTTTGACCGTTGTAAAAATTTGCGTCAAGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGc                                                                                                                                                         <  1:482867/250‑1 (MQ=255)                                                                                cGCATTAAGCGCGAATGCCAAAAGCCTGTTTGAAAAATACAACCTTTTTGACCGTTGTAAAAATTTGCGTCAAGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTaaattgaaaac                                                                                                                                                                                                                              >  1:607727/1‑163 (MQ=255)                                                                                  cATTAAGCGCGAATGCCAAAAGCCTGTTTGAAAAATACAACCTTTTTGACCGTTGTAAAAATTTGCGTCAAGGTGAAATCATTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAg                                                                                                                                            <  1:447650/251‑1 (MQ=255)                                                                                     tAAGCGCGAATGCCAAAAGCCTGTTTGAAAAATACAACCTTTTTGACCGTTGTAAAAATTTGCGTCAAGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTg                                                                                                                                         <  1:671825/251‑1 (MQ=255)                                                                                         cgcgAATGCCAAAAGCCTGTTTGAAAAATACAACCTTTTTGACCGTTGTAAAAATTTGCGTCAAGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCg                                                                                                                                     >  1:746470/1‑251 (MQ=255)                                                                                           cgAATGCCAAAAGCCTGTTTGAAAAATACAACCTTTTTGACCGTTGTAAAAATTTGCGTCAAGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGc                                                                                                                                    <  1:405385/250‑1 (MQ=255)                                                                                               tgccaaaaGCCTGTTTGAAAAATACAACCTTTTTGACCGTTGTAAAAATTTGCGTCAAGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGc                                                                                                                               <  1:827840/247‑1 (MQ=255)                                                                                                         cTGTTTGAAAAATACAACCTTTTTGACCGTTGTAAAAATTTGCGTCAAGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACaaaa                                                                                                                     <  1:880963/251‑1 (MQ=255)                                                                                                                      aCAACCTTTTTGACCGTTGTAAAAATTTGCGTCAAGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGAt                                                                                                        <  1:49409/251‑1 (MQ=255)                                                                                                                        aaCCTTTTTGACCGTTGTAAAAATTTGCGTCAAGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGAttt                                                                                                      <  1:252915/251‑1 (MQ=255)                                                                                                                           cTTTTTGACCGTTGTAAAAATTTGCGTCAAGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAg                                                                                                                   >  1:269481/1‑235 (MQ=255)                                                                                                                            tttttGACCGTTGTAAAAATTTGCGTCAAGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTc                                                                                                  <  1:190311/251‑1 (MQ=255)                                                                                                                             ttttGACCGTTGTAAAAATTTGCGTCAAGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGAc                                                                                                                                                                    <  1:523565/184‑1 (MQ=255)                                                                                                                                          aaaaaTTTGCGTCAAGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAAc                                                                                    <  1:645212/248‑1 (MQ=255)                                                                                                                                                     tCAAGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATAccta                                                                          <  1:506760/250‑3 (MQ=255)                                                                                                                                                       aaGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGc                                                                       <  1:18114/251‑1 (MQ=255)                                                                                                                                                       aaGGTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGc                                                                       <  1:772400/251‑1 (MQ=255)                                                                                                                                                          gTGAAATCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCt                                                                      >  1:794316/1‑249 (MQ=255)                                                                                                                                                             aaaTCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTaatg                                                                 <  1:176915/251‑1 (MQ=255)                                                                                                                                                             aaaTCACTTCTTGTGAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTaat                                                                  <  1:619408/250‑1 (MQ=255)                                                                                                                                                                     tcttgtgAAGCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGca                                                         <  1:68357/248‑1 (MQ=255)                                                                                                                                                                              gCAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACa                                                >  1:407658/1‑251 (MQ=255)                                                                                                                                                                               cAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGt                                                                                                                                           <  1:554918/159‑1 (MQ=255)                                                                                                                                                                               cAAATATTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAg                                               <  1:879705/251‑1 (MQ=255)                                                                                                                                                                                  atatTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTa                                            >  1:557417/1‑251 (MQ=255)                                                                                                                                                                                   tatTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTaaaa                                                                                                                                                              >  1:721711/1‑136 (MQ=255)                                                                                                                                                                                   tatTGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAg                                           <  1:778239/251‑1 (MQ=255)                                                                                                                                                                                     ttGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCg                                         >  1:95732/1‑251 (MQ=255)                                                                                                                                                                                     ttGTTTCCACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCg                                         >  1:482896/1‑251 (MQ=255)                                                                                                                                                                                           ccACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGc                                                                                                                                       <  1:520275/151‑1 (MQ=255)                                                                                                                                                                                            cACCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAAc                                  <  1:361700/251‑1 (MQ=255)                                                                                                                                                                                             aCCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCaa                                                                                                                             <  1:515217/159‑1 (MQ=255)                                                                                                                                                                                             aCCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTaatg                                                                 <  1:246456/219‑1 (MQ=255)                                                                                                                                                                                             aCCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACg                                 >  1:592759/1‑251 (MQ=255)                                                                                                                                                                                             aCCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACg                                 >  1:549341/1‑251 (MQ=255)                                                                                                                                                                                             aCCGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACg                                 >  1:396846/1‑251 (MQ=255)                                                                                                                                                                                              ccGTGGAGAGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGt                                >  1:295796/1‑251 (MQ=255)                                                                                                                                                                                                     gaGTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCttaa                         >  1:572981/2‑248 (MQ=255)                                                                                                                                                                                                       gTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCaa                                                                                                                             <  1:4547/149‑1 (MQ=255)                                                                                                                                                                                                       gTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGAt                                                                                                        <  1:614596/170‑1 (MQ=255)                                                                                                                                                                                                       gTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTaaa                        >  1:322559/1‑250 (MQ=255)                                                                                                                                                                                                       gTATGAGCTTCTTAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTaaa                        >  1:146889/1‑250 (MQ=255)                                                                                                                                                                                                              cttcttAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAg                 <  1:427744/250‑1 (MQ=255)                                                                                                                                                                                                                tcttAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATAc                                                                             >  1:214849/1‑188 (MQ=255)                                                                                                                                                                                                                tcttAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAggg               >  1:14967/1‑250 (MQ=255)                                                                                                                                                                                                                tcttAGATTCGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAggg               >  1:364191/1‑250 (MQ=255)                                                                                                                                                                                                                         cGTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATAtt      >  1:517490/1‑250 (MQ=255)                                                                                                                                                                                                                          gTTTGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTc     <  1:548839/250‑1 (MQ=255)                                                                                                                                                                                                                           tttGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGt                                <  1:883047/222‑1 (MQ=255)                                                                                                                                                                                                                            ttGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCaac  <  1:806231/251‑2 (MQ=255)                                                                                                                                                                                                                            ttGAAAGTAACGTCAATAGTAAATTGAAAACTATTGATAAACTCGCTAAACGGATGACAAAATCTCAAGATGTCAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCTACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTTAAACGTTAAGGGCGTTATATTCaac  <  1:256227/251‑2 (MQ=255)                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                        CGCATAGTTTGTATGGTGAAATAAATGGCTTAAAATCGGAGTTTACCCCGGTAATCGATTTAGTTTCCGGTGGGAAAAACGCATTAAGCGCGAATGCTAAAAGCCTGTTTGAAAAATACAACCTTTTTGACCGTTGTAAGAATTTACGTCAAGGTGAAATTACTTCCTGTGAAGCAAATATTGTTTCCACCGTGGAAAGTATGAGCTTCTTAGATTCGTTTGAAAGTAATGTCAATAGCAAACTTAAAGCAATTGATAAGTTAGCTAATCGTATGGCGAAATCAAACGATGTAAAAGAAAGCCAGGACTTAAAAAATGCAATGGACGTGCAGTTGGCCGCATTGCAATCACAAAAAGTCCAGTTGGATTTATTCAACGCACGGCAAACGGAATACCGACGCTTAATGAATGAGCAACAAAAACAGTTAGCGTCTCAACGTCGCTCAAACGTTAAGGGCGTTATATTCAAT  >  1/1198273‑1198742

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑