Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,197,970 C→T intergenic (+38390/+222967) unknown → / ← unknown tRNA‑Val‑GAC/tRNA‑Met‑CAT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,197,9700CT100.0% 204.2 / NA 77intergenic (+38390/+222967)unknown/unknowntRNA‑Val‑GAC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (40/37);  total (40/37)

TAACCCGATTGCACGCAAAGTAGATTATGTGGATGGTTTCGGAATCAGCGAAAAACAATTTGAAATTATCCGTGAATTACAACCGGATTCCCGTACTTTCTTAGTGCGTAAAGGGCTCGAAACCGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCCTACATCAAATTATCGAAGAAGTCGGCGAAGCCGCTAATGACTGGATTCCGATTTATAAACAACGTTGTGTATAAGGAGAACGTGATGAAAATGTTTAAAAAACTCACTTTAATTGCTGTTTTATCTATGCCGGTATTGGTACAAGCCAGCGGTATTCCGGTTGTTGATGCCGCAGCTGCCGGTCAACGTCAAATGAGCATGCTTCAAACGGTGCAACAATGGGCAAAAGAGGCTAAACAGTGGACGGATACAGTTTCGCATTATAAAAATGAGCTGAAAGCG  >  1/1197724‑1198211
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                 
tAACCCGATTGCCCGCAAAGTGGATTATGTGGATGGTTTCGGAATCAGCGAAAAACAATTTGAAATTATCCGTGAATTACAACCGGATTCCCGTACTTTCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGa                                                                                                                                                                                                                                               >  1:730905/1‑251 (MQ=255)
  aCCCGATTGCCCGCAAAGTGGATTATGTGGATGGTTTCGGAATCAGCGAAAAACAATTTGAAATTATCCGTGAATTACAACCGGATTCCCGTACTTTCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGAtt                                                                                                                                                                                                                                             >  1:839225/1‑251 (MQ=255)
       aTTGCCCGCAAAGTGGATTATGTGGATGGTTTCGGAATCAGCGAAAAACAATTTGAAATTATCCGTGAATTACAACCGGATTCCCGTACTTTCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTccaat                                                                                                                                                                                                                                        <  1:128730/251‑4 (MQ=255)
               cAAAGTGGATTATGTGGATGGTTTCGGAATCAGCGAAAAACAATTTGAAATTATCCGTGAATTACAACCGGATTCCCGTACTTTCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAaac                                                                                                                                                                                                                                <  1:376801/251‑1 (MQ=255)
                     ggATTATGTGGATGGTTTCGGAATCAGCGAAAAACAATTTGAAATTATCCGTGAATTACAACCGGATTCCCGTACTTTCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAaacaac                                                                                                                                                                                                                             >  1:86257/2‑248 (MQ=255)
                     ggATTATGTGGATGGTTTCGGAATCAGCGAAAAACAATTTGAAATTATCCGTGAATTACAACCGGATTCCCGTACTTTCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGAATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGtt                                                                                                                                                                                                                          >  1:445174/2‑251 (MQ=255)
                          aTGTGGATGGTTTCGGAATCAGCGAAAAACAATTTGAAATTATCCGTGAATTACAACCGGATTCCCGTACTTTCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGta                                                                                                                                                                                                                     >  1:144466/1‑251 (MQ=255)
                           tgtgGATGGTTTCGGAATCAGCGAAAAACAATTTGAAATTATCCGTGAATTACAACCGGATTCCCGTACTTTCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGtat                                                                                                                                                                                                                    <  1:649929/251‑1 (MQ=255)
                                aTGGTTTCGGAATCAGCGAAAAACAATTTGAAATTATCCGTGAATTACAACCGGATTCCCGTACTTTCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAgg                                                                                                                                                                                                                <  1:869660/250‑1 (MQ=255)
                                aTGGTTTCGGAATCAGCGAAAAACAATTTGAAATTATCCGTGAATTACAACCGGATTCCCGTACTTTCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAgg                                                                                                                                                                                                                <  1:701495/250‑1 (MQ=255)
                                aTGGTTTCGGAATCAGCGAAAAACAATTTGAAATTATCCGTGAATTACAACCGGATTCCCGTACTTTCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAgg                                                                                                                                                                                                                <  1:280177/250‑1 (MQ=255)
                                   gTTTCGGAATCAGCGAAAAACAATTTGAAATTATCCGTGAATTACAACCGGATTCCCGTACTTTCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAaac                                                                                                                                                                                                                                <  1:459239/231‑1 (MQ=255)
                                   gTTTCGGAATCAGCGAAAAACAATTTGAAATTATCCGTGAATTACAACCGGATTCCCGTACTTTCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAg                                                                                                                                                                                                                 <  1:18203/246‑1 (MQ=255)
                                   gTTTCGGAATCAGCGAAAAACAATTTGAAATTATCCGTGAATTACAACCGGATTCCCGTACTTTCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGga                                                                                                                                                                                                               >  1:532746/1‑248 (MQ=255)
                                   gTTTCGGAATCAGCGAAAAACAATTTGAAATTATCCGTGAATTACAACCGGATTCCCGTACTTTCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGaa                                                                                                                                                                                                            >  1:880424/1‑251 (MQ=255)
                                   gTTTCGGAATCAGCGAAAAACAATTTGAAATTATCCGTGAATTACAACCGGATTCCCGTACTTTCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGATTAGGGCGTGAAAACTTAAAAATTCTGTAAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGga                                                                                                                                                                                                               >  1:284257/1‑248 (MQ=255)
                                   gTTTCGGAATCAGCGAAAAACAATTTGAAATTATCCGTGAATTACAACCGGATTCCCGTACTTTCTTAGTGCGTAAAGCGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGaa                                                                                                                                                                                                            >  1:416843/1‑251 (MQ=255)
                                            tCAGCGAAAAACAATTTGAAATTATCCGTGAATTACAACCGGATTCCCGTACTTTCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGaa                                                                                                                                                                                                   <  1:624481/251‑1 (MQ=255)
                                                         aTTTGAAATTATCCGTGAATTACAACCGGATTCCCGTACTTTCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAgg                                                                                                                                                                                                                >  1:393963/1‑225 (MQ=255)
                                                          tttGAAATTATCCGTGAATTACAACCGGATTCCCGTACTTTCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAAc                                                                                                                                                                                     <  1:184391/251‑1 (MQ=255)
                                                                         gAATTACAACCGGATTCCCGTACTTTCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAg                                                                                                                                                                                                                 >  1:696031/1‑208 (MQ=255)
                                                                          aaTTACAACCGGATTCCCGTACTTTCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTg                                                                                                                                                                         >  1:451251/1‑247 (MQ=255)
                                                                            gtttcgagccctttacgcaCTTTCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTg                                                                                                                                                                         >  1:750249/19‑245 (MQ=255)
                                                                                 aCCGGATTCCCGTACTTTCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGtcttgtct                                                                                                                                                              <  1:187684/251‑8 (MQ=255)
                                                                                       ttCCCGTACTTTTTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGTGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAgg                                                                                                                                                                                                                >  1:62856/1‑195 (MQ=255)
                                                                                         cccGTACTTTCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCgg                                                                                                                                                       >  1:564945/1‑250 (MQ=255)
                                                                                             tACTTTCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGc                                                                                                                                                                        <  1:35442/229‑1 (MQ=255)
                                                                                                 ttCTTAGTGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAaacaac                                                                                                                                                                                                                             >  1:466110/1‑172 (MQ=255)
                                                                                                        tGCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGct                                                                                                                                         <  1:72966/249‑2 (MQ=255)
                                                                                                         gCGTAAAGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGctag                                                                                                                                       >  1:329409/1‑247 (MQ=255)
                                                                                                             aaaGGGCTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTa                                                                                                                                  <  1:897662/251‑1 (MQ=255)
                                                                                                                   cTCGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCgg                                                                                                                            <  1:56737/251‑1 (MQ=255)
                                                                                                                     cGAAACAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGgta                                                                                                                          >  1:842939/1‑250 (MQ=255)
                                                                                                                       aaaCAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGCAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAgg                                                                                                                                                                                                                >  1:430370/1‑163 (MQ=255)
                                                                                                                       aaaCAGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGgtag                                                                                                                         <  1:149322/250‑3 (MQ=255)
                                                                                                                            gCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTAtac                                                                                                                                                          <  1:267966/212‑3 (MQ=255)
                                                                                                                            gCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATg                                                                                                                   >  1:372885/1‑251 (MQ=255)
                                                                                                                             ccTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGtagttg                                                                                                                      <  1:280069/247‑1 (MQ=255)
                                                                                                                              cTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATggt                                                                                                                 >  1:279456/1‑249 (MQ=255)
                                                                                                                                 aGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAgg                                                                                                                                                                                                                >  1:337497/1‑153 (MQ=255)
                                                                                                                                     aaGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATgg                                                                                                                  >  1:262707/1‑242 (MQ=255)
                                                                                                                                       gTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAgg                                                                                                                                                                                                                >  1:873780/1‑147 (MQ=255)
                                                                                                                                           gATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAgg                                                                                                                                                                                                                <  1:744903/143‑1 (MQ=255)
                                                                                                                                                    ggTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTccaat                                                                                                                                                                                                                                        >  1:486208/1‑107 (MQ=255)
                                                                                                                                                     gTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAgg                                                                                                                                                                                                                >  1:119159/1‑133 (MQ=255)
                                                                                                                                                     gTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTAtac                                                                                                                                                          <  1:371586/187‑3 (MQ=255)
                                                                                                                                                     gTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATgg                                                                                                                  >  1:208441/1‑226 (MQ=255)
                                                                                                                                                     gTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAAt                                                                                          >  1:443052/1‑251 (MQ=255)
                                                                                                                                                     gTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAAt                                                                                          >  1:655629/1‑251 (MQ=255)
                                                                                                                                                            gCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAAtcagtat                                                                                    <  1:571004/250‑7 (MQ=255)
                                                                                                                                                                 aaaaCTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAAtcagtatgttac                                                                               <  1:773688/250‑12 (MQ=255)
                                                                                                                                                                    aCTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAAtcagtatgttacaaac                                                                           <  1:580475/251‑16 (MQ=255)
                                                                                                                                                                     cTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGc                                                                                                                                                                        >  1:691146/1‑157 (MQ=255)
                                                                                                                                                                            aTTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAAtcagtatgttacaaactgttcaac                                                                   <  1:34751/251‑24 (MQ=255)
                                                                                                                                                                            aTTCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAAtcagtatgttacaaactgttcaac                                                                   <  1:20359/251‑24 (MQ=255)
                                                                                                                                                                              tCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAATCAGTATGTTACAAACTGTTcaacag                                                                 <  1:728130/251‑2 (MQ=255)
                                                                                                                                                                              tCTGTCAACCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAATCAGTATGTTACAAACTGTTcaacag                                                                 <  1:135463/251‑2 (MQ=255)
                                                                                                                                                                                     aCCAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAAtcagtatgttacaaactgttcaac                                                                   <  1:84945/242‑24 (MQ=255)
                                                                                                                                                                                      ccAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAAtcagtatgttacaaactgttcaac                                                                   >  1:133564/1‑218 (MQ=255)
                                                                                                                                                                                      ccAGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAATCAGTATGTTACAAACTGTTCAACAGTGGGCaaa                                                         >  1:598101/1‑251 (MQ=255)
                                                                                                                                                                                        aGTAAGGATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAATCAGTATGTTACAAACTGTTCAACAGTGGGCAAAag                                                       >  1:644079/1‑251 (MQ=255)
                                                                                                                                                                                             ggATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCgg                                                                                                                            <  1:874890/177‑1 (MQ=255)
                                                                                                                                                                                             ggATAACGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCAGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAATCAGTATGTTACAAACTGTTcaacag                                                                 >  1:89648/1‑235 (MQ=255)
                                                                                                                                                                                                 aaCGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTTTACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAATCAGTATGTTACAAACTGTTCAACAGTGGGCAAAAGAAGCAAAAc                                              <  1:737734/251‑1 (MQ=255)
                                                                                                                                                                                                 aaCGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAAtcagtatgttacaaactgttcaac                                                                   <  1:336742/230‑24 (MQ=255)
                                                                                                                                                                                                  aCGCAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAAtc                                                                                         >  1:471331/1‑206 (MQ=255)
                                                                                                                                                                                                     cAGAAATCTTACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAAtcagtatgttacaaac                                                                           <  1:430051/218‑16 (MQ=255)
                                                                                                                                                                                                           tcttACATCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAATCAGTATGTTACAAACTGTTCAACAGTGGGCAAAAGAAGCAAAACAATGGAcaga                                    >  1:51409/4‑248 (MQ=255)
                                                                                                                                                                                                                 aTCAAATTATTGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAATCAGTATGTTACAAACTGTTCAACAGTGGGCAAAAGAAGCAAAACAATGGAcagaaaccgt                              >  1:483430/1‑242 (MQ=255)
                                                                                                                                                                                                                      attattGAAGAAGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAATCAGTATGTTACAAACTGTTCAACAGTGGGCAAAAGAAGCAAAACAATGGAcagaaaccgtatctc                         <  1:176362/251‑15 (MQ=255)
                                                                                                                                                                                                                         attgaagaaGTTGGCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATggtgctgctgc                                                                                                         <  1:172880/165‑11 (MQ=255)
                                                                                                                                                                                                                                     ggCGAAGCCGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTGGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAAtcagtatgttacaaac                                                                           <  1:689314/186‑16 (MQ=255)
                                                                                                                                                                                                                                            ccGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAATCAGTATGTTACAAACTGTTCAACAGTGGGCAAAAGAAGCAAAACAATGGACAGAAACCGTATCTCATTACaaaaacgaactcaagg    >  1:308349/1‑239 (MQ=255)
                                                                                                                                                                                                                                            ccGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAATCAGTATGTTACAAACTGTTCAACAGTGGGCAAAAGAAGCAAAACAATGGACAGAAACCGTATCTCATTACaaaaacgaactcaagg    >  1:86401/1‑239 (MQ=255)
                                                                                                                                                                                                                                            ccGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAATCAGTATGTTACAAACTGTTCAACAGTGGGCAAAAGAAGCAAAACAATGGACAGAAACCGTATCTCATTACaaaaacgaactcaagg    >  1:731531/1‑239 (MQ=255)
                                                                                                                                                                                                                                             cGCTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAATCAGTATGTTACAAACTGTTCAACAGTGGGCAAAAGAAGCAAAACAATGGACAGAAACCGTATCTCATTACaaaaacgaactcaaggcg  <  1:347358/251‑14 (MQ=255)
                                                                                                                                                                                                                                               cTAATGATTGGATTCCAATTTATAAACAACGTTGTGTATAAGGAGAACGTAATGAAAATCTTTAAAAAACTCACTTTAATTGCTGTCTTGTCTATACCGGCATTAGTTCAAGCTAGCGGTATTCCGGTAGTTGATGGTGCTGCTGCAGGTCAACGGCAAAtcagtatgttacaaac                                                                           <  1:267871/176‑16 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                 
TAACCCGATTGCACGCAAAGTAGATTATGTGGATGGTTTCGGAATCAGCGAAAAACAATTTGAAATTATCCGTGAATTACAACCGGATTCCCGTACTTTCTTAGTGCGTAAAGGGCTCGAAACCGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTAAGGATAACGCAGAAATCCTACATCAAATTATCGAAGAAGTCGGCGAAGCCGCTAATGACTGGATTCCGATTTATAAACAACGTTGTGTATAAGGAGAACGTGATGAAAATGTTTAAAAAACTCACTTTAATTGCTGTTTTATCTATGCCGGTATTGGTACAAGCCAGCGGTATTCCGGTTGTTGATGCCGCAGCTGCCGGTCAACGTCAAATGAGCATGCTTCAAACGGTGCAACAATGGGCAAAAGAGGCTAAACAGTGGACGGATACAGTTTCGCATTATAAAAATGAGCTGAAAGCG  >  1/1197724‑1198211

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑