| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 236,633 | T→G | intergenic (+103322/+25598) | unknown → / ← unknown | tRNA‑Val‑TAC/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 236,633 | 0 | T | G | 100.0% | 253.0 / NA | 89 | intergenic (+103322/+25598) | unknown/unknown | tRNA‑Val‑TAC/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (34/55); total (34/55) | |||||||||||
CTCGATCGACTTATGCAGATTTGAGTGCATTTCATTATATTTTTTTATAACCTCTTTGGCATCACGGTAGTAATTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGCCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATATCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATACCCCTTTCAAAAATATATATTTCTTTTCTGAAAAAATTTTTGCTAATTTCAGCTCACCAAGTCCGACGAATTCACACAT‑AAAAAGGAGGGAAAAATAGCATTACTTACAACGCTCCCCTTTTTAATCGATTTCTGCATGGC > 1/236387‑236874 | cTCGATCGACTTATGCAGATTTGAGTGCATTTCATTATATTTTTTTATAACCTCTTTGGCATCACGGTAGTAATTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGt < 1:3128/250‑1 (MQ=255) aTGCAGATTTGAGTGCATTTCATTATATTTTTTTATAACCTCTTTGGCATCACGGTAGTAATTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAatat > 1:286346/1‑251 (MQ=255) aTGCAGATTTGAGTGCATTTCATTATATTTTTTTATAACCTCTTTGGCATCACGGTAGTAATTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAatat < 1:54998/251‑1 (MQ=255) tttGAGTGCATTTCATTATATTTTTTTATAACCTCTTTGGCATCACGGTAGTAATTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTc < 1:18501/251‑1 (MQ=255) gTGCATTTCATTATATTTTTTTATAACCTCTTTGGCATCACGGTAGTAATTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATg > 1:488277/1‑244 (MQ=255) tGCATTTCATTATATTTTTTTATAACCTCTTTGGCATCACGGTAGTAATTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTtc < 1:536204/251‑1 (MQ=255) tGCATTTCATTATATTTTTTTATAACCTCTTTGGCATCACGGTAGTAATTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTtc < 1:155876/251‑1 (MQ=255) tCATTATATTTTTTTATAACCTCTTTGGCATCACGGTAGTAATTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCca > 1:74043/1‑250 (MQ=255) tCATTATATTTTTTTATAACCTCTTTGGCATCACGGTAGTAATTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCca > 1:874865/1‑250 (MQ=255) tttttttATAACCTCTTTGGCATCACGGTAGTAATTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGcc < 1:244788/251‑1 (MQ=255) ccTCTTTGGCATCACGGTAGTAATTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGACGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGt > 1:870299/1‑250 (MQ=255) ccTCTTTGGCATCACGGTAGTAATTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGt > 1:541989/1‑250 (MQ=255) ctTTGGCATCACGGTAGTAATTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGcc > 1:206734/1‑244 (MQ=255) gCATCACGGTAGTAATTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTaa < 1:705937/250‑1 (MQ=255) aTCACGGTAGTAATTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGc < 1:299295/251‑1 (MQ=255) aTCACGGTAGTAATTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGc < 1:390946/251‑1 (MQ=255) gtagtaATTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGt < 1:784342/184‑1 (MQ=255) gtagtaATTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCcac < 1:140029/216‑1 (MQ=255) gtagtaATTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGcc > 1:537242/1‑224 (MQ=255) gtagtaATTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGc < 1:564880/245‑1 (MQ=255) gtagtaATTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTg > 1:744009/1‑249 (MQ=255) gtagtaATTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTg > 1:161749/1‑249 (MQ=255) agtaATTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGcc < 1:668363/229‑1 (MQ=255) aaTTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCAc < 1:604971/251‑1 (MQ=255) aTTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCAcc < 1:485957/251‑1 (MQ=255) aTTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCAcc < 1:56933/251‑1 (MQ=255) ttttCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCg > 1:332675/1‑251 (MQ=255) ccACATAAGATAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGAc > 1:33261/1‑249 (MQ=255) cacaTAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGaa > 1:275903/1‑179 (MQ=255) tAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAg < 1:788803/251‑1 (MQ=255) tAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAg < 1:835006/251‑1 (MQ=255) aaGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGcc < 1:601610/211‑1 (MQ=255) aaGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGt > 1:207263/1‑251 (MQ=255) aaGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGt < 1:786591/251‑1 (MQ=255) aaGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGt < 1:541006/251‑1 (MQ=255) gTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCcac > 1:811369/1‑194 (MQ=255) tCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCtt < 1:776899/251‑1 (MQ=255) tCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCtt < 1:287313/251‑1 (MQ=255) aCAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATAc < 1:402196/251‑1 (MQ=255) aCAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATAc < 1:537526/251‑1 (MQ=255) cAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGc < 1:668008/213‑1 (MQ=255) cAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATAcc < 1:560449/251‑1 (MQ=255) cAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATAcc < 1:830219/251‑1 (MQ=255) aTTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAg > 1:829664/1‑236 (MQ=255) aTTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGc < 1:30120/242‑1 (MQ=255) aTTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCtt < 1:21336/244‑1 (MQ=255) aTTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATAc < 1:361746/248‑1 (MQ=255) cGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGt > 1:397909/1‑222 (MQ=255) cGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATAccc < 1:783230/235‑1 (MQ=255) tttAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATAccc < 1:62935/233‑1 (MQ=255) acTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGt < 1:363528/212‑1 (MQ=255) acTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGt > 1:707210/1‑212 (MQ=255) acTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATACCCCTTTCAAAAATATATAtttctttt > 1:889519/1‑249 (MQ=255) acTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCACCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGtat > 1:428071/1‑214 (MQ=255) ccttccttATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGt < 1:219405/204‑1 (MQ=255) cttccttATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGc > 1:667768/1‑192 (MQ=255) aaTCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCATGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATACCCCTTTCAAAAATATATATTTCTTTTCTGAAAAAATTTTTGCTAATTTCAGc < 1:453633/251‑1 (MQ=255) atcatGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATACCCCTTTCAAAAATATATATTTCTTTTCTGAAAAAATTTTTGCTAATTTCAGc > 1:837147/1‑240 (MQ=255) tGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGcc < 1:26123/133‑1 (MQ=255) tGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGt < 1:589095/173‑1 (MQ=255) gCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATAccc < 1:874054/185‑1 (MQ=255) ggCTGAGAAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCtt < 1:313065/169‑1 (MQ=255) gaAACGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCtt > 1:826922/1‑163 (MQ=255) aaaCGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATACCCCTTTCAAAAATATATATTTCTTTTCTGAAAAAATTTTTGCTAATTTCAGCTCACCAAGTCCGACGAATTCACACAT‑AAAAagg < 1:808629/251‑1 (MQ=255) aaaCGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATACCCCTTTCAAAAATATATATTTCTTTTCTGAAAAAATTTTTGCTAATTTCAGCTCACCAAGTCCGACGAATTCACACAT‑AAAAagg < 1:300161/251‑1 (MQ=255) cGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATACCCCTTTCAAAAATATATATTTCTTTTCTGAAAAAATTTTTGCTAATTTCAGCTCACCAAGTCCGACGAATTCACACAT‑AAAAaggagg > 1:20856/1‑251 (MQ=255) cGTAGAGATTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATACCCCTTTCAAAAATATATATTTCTTTTCTGAAAAAATTTTTGCTAATTTCAGCTCACCAAGTCCGACGAATTCACACAT‑AAAAaggagg > 1:410047/1‑251 (MQ=255) gaTTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAg > 1:148753/1‑145 (MQ=255) gaTTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGt < 1:35760/146‑1 (MQ=255) gaTTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATAccc > 1:63429/1‑159 (MQ=255) gaTTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATACCCCTTTCAAAAATATATATTTCTTTTCTGAAAAAATTTTTGCTAATTTCAGCTCACCAAGTCCGACGAATTCACACAT‑AAAAAGGAGGGaaaaa > 1:630507/1‑251 (MQ=255) aTTCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGta > 1:877457/1‑146 (MQ=255) tCAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATAcccc < 1:161630/157‑1 (MQ=255) cAATGAAGTCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATAcc < 1:366541/154‑1 (MQ=255) gtccTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTc < 1:40431/66‑1 (MQ=255) gtccTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCgg > 1:842299/3‑123 (MQ=255) ccTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATACCCCTTTCAAAAATATATATTTCTTTTCTGAAAAAATTTTTGCTAATTTCAGCTCACCAAGTCCGACGAATTCACACAT‑AAAAAGGAGGGAAAAATAGCAttactta > 1:810295/1‑250 (MQ=255) gCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGta < 1:451677/131‑1 (MQ=255) gCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATACCCCTTTCAAAAATATATATTTCTTTTCTGAAAAAATTTTTGCTAATTTCAGCTCACCAAGTCCGACGAATTCACACAT‑AAAAAGGAGGGAAAAATAGCATTACTTACaa > 1:889418/1‑250 (MQ=255) tCAGATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATACCCCTTTCAAAAATATATATTTCTTTTCTGAAAAAATTTTTGCTAATTTCAGCTCACCAAGTCCGACGAATTCACACAT‑AAAAAGGAGGGAAAAATAGCATTACTTACAACGc < 1:882647/251‑1 (MQ=255) gATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATg > 1:671991/1‑43 (MQ=255) gATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTa < 1:532045/95‑1 (MQ=255) gATTGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATACCCCTTTCAAAAATATATATTTCTTTTCTGAAAAAATTTTTGCTAATTTCAGCTCACCAAGTCCGACGAATTCACACAT‑AAAAAGGAGGGAAAAATAGCATTACTTACAAc < 1:788587/246‑1 (MQ=255) ttGAAGTCGTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATACCCCTTTCAAAAATATATATTTCTTTTCTGAAAAAATTTTTGCTAATTTCAGCTCACCAAGTCCGACGAATTCACACAT‑AAAAAGGAGGGAAAAATAGCATTACTTACAACGCTcccc < 1:191110/251‑1 (MQ=255) gTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGt > 1:268604/1‑115 (MQ=255) gTTATCCACGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATACCCCTTTCAAAAATATATATTTCTTTTCTGAAAAAATTTTTGCTAATTTCAGCTCACCAAGTCCGACGAATTCACACAT‑AAAAag < 1:409010/210‑1 (MQ=255) cGATTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATAcc < 1:555705/119‑1 (MQ=255) aTTGAAACGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCtt < 1:262759/112‑1 (MQ=255) aCGAAATAGCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCTCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATACCCCTTTCAAAAAGATATATTTCTTTTCTGAAAAAATTTTTGCTAATTTCAGCTCACCAAGTCCGACGAATTCACACATAAAAAAGGAGGGAAAAATAGCATTACTTACAACGCTCCCCTTTTTAATCGATTTCTGCATGGc < 1:829422/251‑1 (MQ=255) | CTCGATCGACTTATGCAGATTTGAGTGCATTTCATTATATTTTTTTATAACCTCTTTGGCATCACGGTAGTAATTTTCGCCCACATAAGTTAATCCGACAATTTTCCCCTGCGCCCGTTTAAACAACTGCACCCCTTCCTTATTTTCAAAATCGCTGATCATCATGCTCAGCGCGGGCTGAGAAACGTAGAGATTCAATGAAGCCCTGCTCAGATTGAAGTCGTTATCCACGATTGAAACGAAATATCGTAAATGTCGAATATCCATGTCATCTTCCTCCACAATGAGCCTTTCGCCCGTCCATGTAAAGCGGTGCTCCCACCGGCGACCTATAAGTATAGCTTATACCCCTTTCAAAAATATATATTTCTTTTCTGAAAAAATTTTTGCTAATTTCAGCTCACCAAGTCCGACGAATTCACACAT‑AAAAAGGAGGGAAAAATAGCATTACTTACAACGCTCCCCTTTTTAATCGATTTCTGCATGGC > 1/236387‑236874 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |