Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,187,974 C→T intergenic (+28394/+232963) unknown → / ← unknown tRNA‑Val‑GAC/tRNA‑Met‑CAT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,187,9740CT100.0% 152.1 / NA 57intergenic (+28394/+232963)unknown/unknowntRNA‑Val‑GAC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (25/32);  total (25/32)

CGAAACCCTAAAACAAAAAGTCGATGCGCCACTGCTGGGTGAGGTTTCTTATATTCACAAACCGGAAGAACAAGATCTCAGCCGTTTCATCACCGACATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCGTTCGCTACAACCCTGGTGCCTTCCACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAGTATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGCATAGTTATCGGGATTCGGTTGATGTTGCCGTTCAAATTTAACCAGTTTTTCCCCCACCTCGGCTAAGGTCGAATAAATGCCGACTCCGACGCCTGCGGCAATGGCACAACCCAGCGCTGTAGCTTCTTTGACAATCGGAATGTTTACCGTTAATC  >  1/1187728‑1188217
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                   
cGAAACCCTAAAACAAAAAGTCGATGCGCCACTGCTGGGTGAGGTTTCTTATATTCACAAACCGGAAGAACAAGATCTCAGCCGTTTCATCACCGACATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACaa                                                                                                                                                                                                                                                 <  1:687962/251‑1 (MQ=255)
   aaCCCTAAAACAAAAAGTCGATGCGCCACTGCTGGGTGAGGTTTCTTATATTCACAAACCGGAAGAACAAGATCTCAGCCGTTTCATCACCGACATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAaaga                                                                                                                                                                                                                                              <  1:538981/251‑1 (MQ=255)
   aaCCCTAAAACAAAAAGTCGATGCGCCACTGCTGGGTGAGGTTTCTTATATTCACAAACCGGAAGAACAAGATCTCAGCCGTTTCATCACCGACATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAaaga                                                                                                                                                                                                                                              <  1:6593/251‑1 (MQ=255)
                          cgcCACTGCTGGGTGAGGTTTCTTATATTCACAAACCGGAAGAACAAGATCTCAGCCGTTTCATCACCGACATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACaaa                                                                                                                                                                                                                                                >  1:212139/1‑226 (MQ=255)
                          cgcCACTGCTGGGTGAGGTTTCTTATATTCACAAACCGGAAGAACAAGATCTCAGCCGTTTCATCACCGACATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCa                                                                                                                                                                                                                       >  1:252146/1‑251 (MQ=255)
                               ctgctgGGTGAGGTTTCTTATATTCACAAACCGGAAGAACAAGATCTCATCCGTTTCATCACCGACATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTAt                                                                                                                                                                                                                             >  1:772317/1‑240 (MQ=255)
                                    gggTGAGGTTTCTTATATTCACAAACCGGAAGAACAAGATCTCAGCCGTTTCATCACCGACATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTg                                                                                                                                                                                                             >  1:552292/1‑251 (MQ=255)
                                     ggTGAGGTTTCTTATATTCACAAACCGGAAGAACAAGATCTCAGCCGTTTCATCACCGACATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTg                                                                                                                                                                                                             <  1:27116/250‑1 (MQ=255)
                                     ggTGAGGTTTCTTATATTCACAAACCGGAAGAACAAGATCTCAGCCGTTTCATCACCGACATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTg                                                                                                                                                                                                             <  1:630810/250‑1 (MQ=255)
                                     ggTGAGGTTTCTTATATTCACAAACCGGAAGAACAAGATCTCAGCCGTTTCATCACCGACATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTg                                                                                                                                                                                                             <  1:838170/250‑1 (MQ=255)
                                          ggTTTCTTATATTCACAAACCGGAAGAACAAGATCTCAGCCGTTTCATCACCGACATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGtttttt                                                                                                                                                                                                       >  1:371186/1‑251 (MQ=255)
                                               cTTATATTCACAAACCGGAAGAACAAGATCTCAGCCGTTTCATCACCGACATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATaaa                                                                                                                                                                                                  >  1:271968/1‑250 (MQ=255)
                                                   tatTCACAAACCGGAAGAACAAGATCTCAGCCGTTTCATCACCGACATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATc                                                                                                                                                                                              <  1:6660/251‑1 (MQ=255)
                                                     ttCACAAACCGGAAGAACAAGATCTCAGCCGTTTCATCACCGACATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAAc                                                                                                                                                                                                                         <  1:174187/222‑1 (MQ=255)
                                                       cacaAACCGGAAGAACAAGATCTCAGCCGTTTCATCACCGACATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTaa                                                                                                                                                                                                                                     <  1:814116/208‑1 (MQ=255)
                                                                gaagaaCAAGATCTCAGCCGTTTCATCACCGACATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGc                                                                                                                                                                                  <  1:553954/250‑1 (MQ=255)
                                                                         gATCTCAGCCGTTTCATCACCGACATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGtt                                                                                                                                                                                                                                       <  1:184798/188‑1 (MQ=255)
                                                                         gATCTCAGCCGTTTCATCACCGACATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAAt                                                                                                                                                                                                                                    <  1:643981/191‑1 (MQ=255)
                                                                         gATCTCAGCCGTTTCATCACCGACATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAg                                                                                                                                                                          >  1:23847/1‑249 (MQ=255)
                                                                                 ccGTTTCATCACCGACATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGtat                                                                                                                                                                  <  1:250689/249‑1 (MQ=255)
                                                                                    tttCATCACCGACATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGc                                                                                                                                                             <  1:646200/251‑1 (MQ=255)
                                                                                            ccGACATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGCATAGTTAt                                                                                                                                                     >  1:216197/1‑251 (MQ=255)
                                                                                             cGACATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGtat                                                                                                                                                                  <  1:828806/237‑1 (MQ=255)
                                                                                               aCATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGCATAGTTATCg                                                                                                                                                   <  1:883743/250‑1 (MQ=255)
                                                                                                         cTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATaaa                                                                                                                                                                                                  >  1:268347/1‑192 (MQ=255)
                                                                                                         cTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGCATAGtt                                                                                                                                                       <  1:788774/236‑1 (MQ=255)
                                                                                                             aCGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGt                                                                                                                                                                                                                     >  1:716658/1‑170 (MQ=255)
                                                                                                              cGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGc                                                                                                                                                             <  1:530948/225‑1 (MQ=255)
                                                                                                                            gAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTg                                                                                                                                                                                                             >  1:332652/1‑163 (MQ=255)
                                                                                                                                    ggCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGCATAGTTATCGGGATTCGGTTGATGTTGCCGTTCAAATTTAACCAGttt                                                                                                             >  1:623085/1‑251 (MQ=255)
                                                                                                                                     gCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGCATAGTTa                                                                                                                                                      >  1:626221/1‑209 (MQ=255)
                                                                                                                                     gCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGCATAGTTATCGGGATTCGGTTGATGTTGCCGTTCAAATTTAACCAGtttt                                                                                                            >  1:49085/1‑251 (MQ=255)
                                                                                                                                          aaaGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGtt                                                                                                                                                                                                                                       <  1:412656/123‑1 (MQ=255)
                                                                                                                                          aaaGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGCATAGTTATCGGGATTCGGTTGATGTTGCCGTTCAAATTTAACCAGTTTTTtccc                                                                                                       <  1:471575/251‑1 (MQ=255)
                                                                                                                                                    gggTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGCATAGTTATCGGGATTCGGTTGATGTTGCCGTTCAAATTTAACCAGTTTTTTCCCCGCCTCgg                                                                                               >  1:548765/1‑249 (MQ=255)
                                                                                                                                                    gggTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGCATAGTTATCGGGATTCGGTTGATGTTGCCGTTCAAATTTAACCAGTTTTTTCCCCGCCTCgg                                                                                               >  1:822620/1‑249 (MQ=255)
                                                                                                                                                    gggTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGCATAGTTATCGGGATTCGGTTGATGTTGCCGTTCAAATTTAACCAGTTTTTTCCCCGCCTCgg                                                                                               >  1:303988/1‑249 (MQ=255)
                                                                                                                                                         ttACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGCATAGTTATCGGGATTCGGTTGATGTTGCCGTTCAAATTTAACCAGTTTTTTCCCCGCCTCGGCTAAGGt                                                                                        <  1:538333/251‑1 (MQ=255)
                                                                                                                                                               aTGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGCATAGTTATCGGGATTCGGTTGATGTTGCCGTTCAAATTTAACCAGTTTTTTCCCCGCCTCGGCTAAGGTCggat                                                                                   <  1:113542/250‑4 (MQ=255)
                                                                                                                                                               aTGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGCATAGTTATCGGGATTCGGTTGATGTTGCCGTTCAAATTTAACCAGTTTTTTCCCCGCCTCGGCTAAGGTCGGATa                                                                                  <  1:33208/251‑1 (MQ=255)
                                                                                                                                                                 gTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAaaga                                                                                                                                                                                                                                              >  1:698478/1‑93 (MQ=255)
                                                                                                                                                                 gTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGccc                                                                                                                                                                                         >  1:597431/1‑146 (MQ=255)
                                                                                                                                                                    ttttACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGCATAGTTATCGGGATTCGGTTGATGTTGCCGTTCAAATTTAACCAGTTTTTTCCCCGCCTCGGCTAAGGTCGGATAAATGc                                                                             <  1:194914/251‑1 (MQ=255)
                                                                                                                                                                    ttttACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCATACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCACTTTGTGCTTTGTGAGTTTGGTATAAAGCATAGTTATCGGGATTCGGTTGATGTTGCCGTTCAAATTTAACCAGTTTTTTCCCCGCCTCGGCTAAGGTCGGATAAATGc                                                                             <  1:551592/251‑1 (MQ=255)
                                                                                                                                                                           gTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGc                                                                                                                                                             >  1:644904/1‑164 (MQ=255)
                                                                                                                                                                           gTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGCATAGTTa                                                                                                                                                      <  1:676631/171‑1 (MQ=255)
                                                                                                                                                                           gTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGCATAGTTATCGGGATTCGGTTGATGTTGCCGTTCAAATTTAACCAGTTTTTTCCCCGCCTCGGCTAAGGTCGGATAAATGCCGACTc                                                                       >  1:292046/1‑250 (MQ=255)
                                                                                                                                                                           gTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCACTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGCATAGTTATCGGGATTCGGTTGATGTTGCCGTTCAAATTTAACCAGTTTTTTCCCCGCCTCGGCTAAGGTCGGATAAATGCCGACTc                                                                       >  1:253458/1‑250 (MQ=255)
                                                                                                                                                                                      aaaaaTCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCATTCGCTACGCCCCTGGTGCTTTCTACAAAGAAGTAGTTAATCCGCTATCAACCTGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGCATAGTTATCGGGTTTCGGTTGATGTTGCCGTTCAAATTTAACCAGTTTTTTCCCCGCCTCGGCTAAGGTCGGATAAATGCCGACTCCGACGCCTGCgg                                                           <  1:336902/251‑1 (MQ=255)
                                                                                                                                                                                                         ccccccTACGATTTTTTTATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGCATAGTTATCGGGATTCGGTTGATGTTGCCGTTCAAATTTAACCAGTTTTTTCCCCGCCTCGGCTAAGGTCGGATAAATGCCGACTCCGACGCCTGCGGCAATGGCACAACCCAgcgc                                        <  1:831482/251‑1 (MQ=255)
                                                                                                                                                                                                                    tttttttATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGCATAGTTATCggg                                                                                                                                                 >  1:752215/1‑135 (MQ=255)
                                                                                                                                                                                                                         ttATCATTCGCTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGCATAGTTATCGGGATTCGGTTGATGTTGCCGTTCAAATTTAACCAGTTTTTTCCCCGCCTCGGCTAAGGTCGGATAAATGCCGACTCCGACGCCTGCGGCAATGGCACAACCCAGCGCTGTAGCTTCTTTGACa                        <  1:678313/251‑1 (MQ=255)
                                                                                                                                                                                                                                   cTACAACCCTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGCATAGTTATCGGGATTCGGTTGATGTTGCCGTTCAAATTTAACCAGTTTTTTCCCCGCCTCGGCTAAGGTCGGATAAATGCCGACTCCGACGCCTGCGGCAATGGCACAACCCAGCGCTGTAGCTTCTTTGACAATCGGAATGt              >  1:712643/1‑251 (MQ=255)
                                                                                                                                                                                                                                          ccTGGTGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCTTTGTGCTTTGTGAGCTTGGTATAAAGCATAGTTATCGGGATTCGGTTGATGTTGCCGTTCAAATTTAACCATTTTTTTCCCCGCCTCGGCTAAGGTCGGATAAATGCCGACTCCGACGCCTGCGGCAATGGCACAACCCAGCGCTGTAGCTTCTTTGACAATCGGAATGTTTACCGt       <  1:599234/251‑1 (MQ=255)
                                                                                                                                                                                                                                               tGCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTGGGAATAAAGCATAGTTATCGGGATTCGGTTGATGTTGCCGTTAAAATTTAACCAGTTTTTTCCCCGCCTCGGCTAAGGTCGGATAAATGCCGACTCCGACGCCTGCGGCAATGGCACAACCCAGCGCTGTAGCTTCTTTGACAATCGGAATGTTTACCGTTAATc  <  1:23436/251‑1 (MQ=255)
                                                                                                                                                                                                                                                gCCTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGCATAGTTATCGGGATTCGGTTGATGTTGCCGTTCAAACTTAACCAGTTTTTTCCCCGCCTCGGCTAAGGTCGGATAAATGCCGACTCCGACGCCTGCGGCAATGGCACAACCCAGCGCTGTAGCTTCTTTGACAATCGGAATGTTTACCGTTAATc  >  1:357319/1‑250 (MQ=255)
                                                                                                                                                                                                                                                  cTTCTACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAATATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGc                                                                                                                                                             <  1:37592/93‑1 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                   
CGAAACCCTAAAACAAAAAGTCGATGCGCCACTGCTGGGTGAGGTTTCTTATATTCACAAACCGGAAGAACAAGATCTCAGCCGTTTCATCACCGACATCGACCGCTTGACGTATATGCAAACGGAACCGGTGGCATAAAAGTGCGGTGGGTTTTACCGATGTTTTTTACGGTATATCAACAAAAAATCGTAGAGAGTTGTCCCCCCTACGATTTTTTTATCGTTCGCTACAACCCTGGTGCCTTCCACAAAGAAGTAGTTAATCCGCTATCAACCAGTTGTAATTGTTTTTTATAAGTATCTGCCCATTGTGCTTTGTGAGCTTGGTATAAAGCATAGTTATCGGGATTCGGTTGATGTTGCCGTTCAAATTTAACCAGTTTTTCCCCCACCTCGGCTAAGGTCGAATAAATGCCGACTCCGACGCCTGCGGCAATGGCACAACCCAGCGCTGTAGCTTCTTTGACAATCGGAATGTTTACCGTTAATC  >  1/1187728‑1188217

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑