Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,186,183 G→A intergenic (+26603/+234754) unknown → / ← unknown tRNA‑Val‑GAC/tRNA‑Met‑CAT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,186,1830GA100.0% 168.4 / NA 62intergenic (+26603/+234754)unknown/unknowntRNA‑Val‑GAC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (33/29);  total (33/29)

CGCCGGCATCCATTACATCGTTGAGCCGTTCCCTCATTGAAAAACGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCATTTTCCCCTTGCAAAAAGATGATTTAGAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAATATTCCGATTTTAATTGCCGAATATTTCAAAACCTGGTTATTGGCGGAATCCACCTTGG  >  1/1185947‑1186429
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                      
cgcCGGCATCCATTACATCGTTGAGCCGTTCCCTCATTGAAAAACGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATa                                                                                                                                                                                                                                            <  1:616519/249‑1 (MQ=255)
       aTCCATTACATCGTTGAGCCGTTCCCTCATTGAAAAACGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTgg                                                                                                                                                                                                                                   >  1:199008/1‑251 (MQ=255)
         ccATTACATCGTTGAGCCGTTCCCTCATTGAAAAACGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAAt                                                                                                                                                                                                                                                     <  1:896322/231‑1 (MQ=255)
            ttACATCGTTGAGCCGTTCCCTCATTGAAAAACGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGCCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGCGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTATGGATAAATTTTTTGTaaaa                                                                                                                                                                                                                              >  1:679526/1‑251 (MQ=255)
              aCATCGTTGAGCCGTTCCCTCATTGAAAAACGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAg                                                                                                                                                                                                                            <  1:496188/251‑1 (MQ=255)
                 tCGTTGAGCCGTTCCCTCATTGAAAAACGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGt                                                                                                                                                                                                                         >  1:49511/1‑251 (MQ=255)
                 tCGTTGAGCCGTTCCCTCATTGAAAAACGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGt                                                                                                                                                                                                                         >  1:411646/1‑251 (MQ=255)
                   gTTGAGCCGTTCCCTCATTGAAAAACGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCa                                                                                                                                                                                                                       >  1:24479/1‑251 (MQ=255)
                                  cATTGAAAAACGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTgg                                                                                                                                                                                                           >  1:581103/1‑248 (MQ=255)
                                       aaaaaCGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAAc                                                                                                                                                                                                    <  1:631087/250‑1 (MQ=255)
                                                   ttATGGAAAAAACCTCAAGAAATGCCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTgcc                                                                                                                                                                                       <  1:803918/251‑1 (MQ=255)
                                                    tATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCGTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTgccc                                                                                                                                                                                      <  1:454991/251‑1 (MQ=255)
                                                              aCCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAAc                                                                                                                                                                            <  1:494965/251‑1 (MQ=255)
                                                                     gAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTc                                                                                                                                                                      >  1:129117/1‑250 (MQ=255)
                                                                      aaaTACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCg                                                                                                                                                                    >  1:206264/1‑251 (MQ=255)
                                                                                 aCCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCcactc                                                                                                                                                                                              <  1:353579/214‑1 (MQ=255)
                                                                                 aCCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGc                                                                                                                                                         <  1:639973/251‑1 (MQ=255)
                                                                                 aCCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGc                                                                                                                                                         <  1:188039/251‑1 (MQ=255)
                                                                                         cGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAAc                                                                                                                                                                                                    >  1:249684/1‑200 (MQ=255)
                                                                                                ccATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGc                                                                                                                                                                                                          <  1:767561/187‑1 (MQ=255)
                                                                                                ccATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTgg                                                                                                                                               <  1:186102/246‑1 (MQ=255)
                                                                                                  aTTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATaaaaa                                                                                                                                        >  1:617096/1‑251 (MQ=255)
                                                                                                     gCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATgg                                                                                                                                     >  1:302712/1‑251 (MQ=255)
                                                                                                       ccTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCt                                                                                                                                                                                                                                                 >  1:67407/1‑141 (MQ=255)
                                                                                                       ccTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCg                                                                                                                                                              >  1:721651/1‑224 (MQ=255)
                                                                                                        cTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTa                                                                                                                                  <  1:565111/251‑1 (MQ=255)
                                                                                                          gtgtgtTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTAtt                                                                                                                                >  1:452191/1‑251 (MQ=255)
                                                                                                                        tttATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGa                                                                                                                  <  1:811290/251‑1 (MQ=255)
                                                                                                                        tttATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGa                                                                                                                  <  1:51113/251‑1 (MQ=255)
                                                                                                                                   gCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAAtt                                                                                                       >  1:65118/1‑251 (MQ=255)
                                                                                                                                    cTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAGAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAAtt                                                                                                       >  1:332644/1‑250 (MQ=255)
                                                                                                                                    cTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAAt                                                                                                        <  1:881098/249‑1 (MQ=255)
                                                                                                                                                cGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAAc                                                                                                                       >  1:153008/1‑222 (MQ=255)
                                                                                                                                                cGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGAt                                                                                          >  1:500714/1‑251 (MQ=255)
                                                                                                                                                                gTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTa                                                                          >  1:836275/1‑251 (MQ=255)
                                                                                                                                                                   tGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTacac                                                                       <  1:344566/251‑1 (MQ=255)
                                                                                                                                                                   tGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTacac                                                                       <  1:671604/251‑1 (MQ=255)
                                                                                                                                                                   tGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTacac                                                                       <  1:11635/251‑1 (MQ=255)
                                                                                                                                                                     aaaTTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTgg                                                                                            <  1:47510/228‑1 (MQ=255)
                                                                                                                                                                     aaaTTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCg                                                                     >  1:526255/1‑251 (MQ=255)
                                                                                                                                                                             ttGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCGCTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCaa                                                             <  1:98534/251‑1 (MQ=255)
                                                                                                                                                                              tGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAat                                                            <  1:177685/251‑1 (MQ=255)
                                                                                                                                                                                   gAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTac                                                                         <  1:39428/233‑1 (MQ=255)
                                                                                                                                                                                   gAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAATATTc                                                        >  1:194231/1‑250 (MQ=255)
                                                                                                                                                                                             gCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCg                                                                                                                                                                    >  1:207308/1‑132 (MQ=255)
                                                                                                                                                                                             gCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCg                                                                                                                                                              >  1:771661/1‑138 (MQ=255)
                                                                                                                                                                                             gCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAATATTCCGATTTTAAtt                                             >  1:134116/1‑251 (MQ=255)
                                                                                                                                                                                             gCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAATATTCCGATTTTAAtt                                             >  1:519899/1‑251 (MQ=255)
                                                                                                                                                                                             gCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAATATTCCGATTTTAAt                                              <  1:415878/250‑1 (MQ=255)
                                                                                                                                                                                               gTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGc                                                                                                                                                                                                          >  1:63288/1‑92 (MQ=255)
                                                                                                                                                                                                   ttattGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCg                                                                                                                                                              >  1:498670/1‑132 (MQ=255)
                                                                                                                                                                                                   ttattGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTacac                                                                       >  1:764369/1‑219 (MQ=255)
                                                                                                                                                                                                   ttattGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTc                                                               <  1:503434/227‑1 (MQ=255)
                                                                                                                                                                                                   ttattGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAat                                                            <  1:664393/230‑1 (MQ=255)
                                                                                                                                                                                                   ttattGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAATATTCCGATTTTAATTGCCGaa                                       >  1:708011/1‑251 (MQ=255)
                                                                                                                                                                                                   ttattGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAATATTCCGATTTTAATTGCCGaa                                       >  1:50944/1‑251 (MQ=255)
                                                                                                                                                                                                          aCAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAATATTCCGATTTTAATTGCCGAATATTTCa                                >  1:376526/1‑251 (MQ=255)
                                                                                                                                                                                                                cgttttCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAATATTCCGATTTTAATTGCCGAATATTTCAAAAc                            <  1:819731/247‑1 (MQ=255)
                                                                                                                                                                                                                     tCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAATATTCCGATTTTAATTGCCGAATATTTCAAAACCTGGTTa                     <  1:805086/251‑1 (MQ=255)
                                                                                                                                                                                                                            gCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAATATTCCGATTTTAATTGCCGAATATTTCAAAACCTGGTTAtt                   >  1:398640/1‑246 (MQ=255)
                                                                                                                                                                                                                                        tttAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTAc                                                                                                             <  1:469443/144‑1 (MQ=255)
                                                                                                                                                                                                                                        tttAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAATATTCCGATTTTAATTGCCGAATATTTCAAAACCTGGTTATTGGCGGAATCCACCTTgg  >  1:553938/1‑251 (MQ=255)
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                      
CGCCGGCATCCATTACATCGTTGAGCCGTTCCCTCATTGAAAAACGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCATTTTCCCCTTGCAAAAAGATGATTTAGAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAATATTCCGATTTTAATTGCCGAATATTTCAAAACCTGGTTATTGGCGGAATCCACCTTGG  >  1/1185947‑1186429

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑