Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,186,156 A→G intergenic (+26576/+234781) unknown → / ← unknown tRNA‑Val‑GAC/tRNA‑Met‑CAT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,186,1560AG100.0% 162.7 / NA 59intergenic (+26576/+234781)unknown/unknowntRNA‑Val‑GAC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (32/27);  total (32/27)

GTATTGAATTATCAAAACTTTCCGGTTTAGCGCCGGCATCCATTACATCGTTGAGCCGTTCCCTCATTGAAAAACGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCATTTTCCCCTTGCAAAAAGATGATTTAGAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAATATTCCGATTTTAATTGCCGAATATTTCA  >  1/1185917‑1186399
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                   
gTATTGAATTATCAAAACTTTCCGGTTTAGCGCCGGCATCCATTACATCGTTGAGCCGTTCCCTCATTGAAAAACGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTccc                                                                                                                                                                                                                                              <  1:532002/247‑1 (MQ=255)
         tATCAAAACTTTCCGGTTTAGCGCCGGCATCCATTACATCGTTGAGCCGTTCCCTCATTGAAAAACGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAgat                                                                                                                                                                                                                                 >  1:131745/1‑251 (MQ=255)
                              cgcCGGCATCCATTACATCGTTGAGCCGTTCCCTCATTGAAAAACGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATa                                                                                                                                                                                                              <  1:616519/249‑1 (MQ=255)
                                     aTCCATTACATCGTTGAGCCGTTCCCTCATTGAAAAACGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTgg                                                                                                                                                                                                     >  1:199008/1‑251 (MQ=255)
                                       ccATTACATCGTTGAGCCGTTCCCTCATTGAAAAACGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAAt                                                                                                                                                                                                                       <  1:896322/231‑1 (MQ=255)
                                          ttACATCGTTGAGCCGTTCCCTCATTGAAAAACGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGCCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGCGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTATGGATAAATTTTTTGTaaaa                                                                                                                                                                                                >  1:679526/1‑251 (MQ=255)
                                            aCATCGTTGAGCCGTTCCCTCATTGAAAAACGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAg                                                                                                                                                                                              <  1:496188/251‑1 (MQ=255)
                                               tCGTTGAGCCGTTCCCTCATTGAAAAACGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGt                                                                                                                                                                                           >  1:49511/1‑251 (MQ=255)
                                               tCGTTGAGCCGTTCCCTCATTGAAAAACGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGt                                                                                                                                                                                           >  1:411646/1‑251 (MQ=255)
                                                 gTTGAGCCGTTCCCTCATTGAAAAACGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCa                                                                                                                                                                                         >  1:24479/1‑251 (MQ=255)
                                                                cATTGAAAAACGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTgg                                                                                                                                                                             >  1:581103/1‑248 (MQ=255)
                                                                     aaaaaCGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAAc                                                                                                                                                                      <  1:631087/250‑1 (MQ=255)
                                                                                 ttATGGAAAAAACCTCAAGAAATGCCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTgcc                                                                                                                                                         <  1:803918/251‑1 (MQ=255)
                                                                                  tATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCGTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTgccc                                                                                                                                                        <  1:454991/251‑1 (MQ=255)
                                                                                            aCCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAAc                                                                                                                                              <  1:494965/251‑1 (MQ=255)
                                                                                                   gAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTc                                                                                                                                        >  1:129117/1‑250 (MQ=255)
                                                                                                    aaaTACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCg                                                                                                                                      >  1:206264/1‑251 (MQ=255)
                                                                                                               aCCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCcactc                                                                                                                                                                <  1:353579/214‑1 (MQ=255)
                                                                                                               aCCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGc                                                                                                                           <  1:188039/251‑1 (MQ=255)
                                                                                                               aCCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGc                                                                                                                           <  1:639973/251‑1 (MQ=255)
                                                                                                                       cGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAAc                                                                                                                                                                      >  1:249684/1‑200 (MQ=255)
                                                                                                                              ccATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGc                                                                                                                                                                            <  1:767561/187‑1 (MQ=255)
                                                                                                                              ccATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTgg                                                                                                                 <  1:186102/246‑1 (MQ=255)
                                                                                                                                aTTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATaaaaa                                                                                                          >  1:617096/1‑251 (MQ=255)
                                                                                                                                   gCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATgg                                                                                                       >  1:302712/1‑251 (MQ=255)
                                                                                                                                     ccTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCt                                                                                                                                                                                                                   >  1:67407/1‑141 (MQ=255)
                                                                                                                                     ccTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCg                                                                                                                                >  1:721651/1‑224 (MQ=255)
                                                                                                                                      cTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTa                                                                                                    <  1:565111/251‑1 (MQ=255)
                                                                                                                                        gtgtgtTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTAtt                                                                                                  >  1:452191/1‑251 (MQ=255)
                                                                                                                                                      tttATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGa                                                                                    <  1:811290/251‑1 (MQ=255)
                                                                                                                                                      tttATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGa                                                                                    <  1:51113/251‑1 (MQ=255)
                                                                                                                                                                 gCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAAtt                                                                         >  1:65118/1‑251 (MQ=255)
                                                                                                                                                                  cTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAGAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAAtt                                                                         >  1:332644/1‑250 (MQ=255)
                                                                                                                                                                  cTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAAt                                                                          <  1:881098/249‑1 (MQ=255)
                                                                                                                                                                              cGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAAc                                                                                         >  1:153008/1‑222 (MQ=255)
                                                                                                                                                                              cGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGAt                                                            >  1:500714/1‑251 (MQ=255)
                                                                                                                                                                                              gTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTa                                            >  1:836275/1‑251 (MQ=255)
                                                                                                                                                                                                 tGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTacac                                         <  1:11635/251‑1 (MQ=255)
                                                                                                                                                                                                 tGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTacac                                         <  1:344566/251‑1 (MQ=255)
                                                                                                                                                                                                 tGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTacac                                         <  1:671604/251‑1 (MQ=255)
                                                                                                                                                                                                   aaaTTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTgg                                                              <  1:47510/228‑1 (MQ=255)
                                                                                                                                                                                                   aaaTTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCg                                       >  1:526255/1‑251 (MQ=255)
                                                                                                                                                                                                           ttGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCGCTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCaa                               <  1:98534/251‑1 (MQ=255)
                                                                                                                                                                                                            tGAGTGAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAat                              <  1:177685/251‑1 (MQ=255)
                                                                                                                                                                                                                 gAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTac                                           <  1:39428/233‑1 (MQ=255)
                                                                                                                                                                                                                 gAATTGGACGGCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAATATTc                          >  1:194231/1‑250 (MQ=255)
                                                                                                                                                                                                                           gCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCg                                                                                                                                      >  1:207308/1‑132 (MQ=255)
                                                                                                                                                                                                                           gCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCg                                                                                                                                >  1:771661/1‑138 (MQ=255)
                                                                                                                                                                                                                           gCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAATATTCCGATTTTAAtt               >  1:134116/1‑251 (MQ=255)
                                                                                                                                                                                                                           gCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAATATTCCGATTTTAAtt               >  1:519899/1‑251 (MQ=255)
                                                                                                                                                                                                                           gCGTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAATATTCCGATTTTAAt                <  1:415878/250‑1 (MQ=255)
                                                                                                                                                                                                                             gTAATTATTGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGc                                                                                                                                                                            >  1:63288/1‑92 (MQ=255)
                                                                                                                                                                                                                                 ttattGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCg                                                                                                                                >  1:498670/1‑132 (MQ=255)
                                                                                                                                                                                                                                 ttattGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTacac                                         >  1:764369/1‑219 (MQ=255)
                                                                                                                                                                                                                                 ttattGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTc                                 <  1:503434/227‑1 (MQ=255)
                                                                                                                                                                                                                                 ttattGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAat                              <  1:664393/230‑1 (MQ=255)
                                                                                                                                                                                                                                 ttattGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAATATTCCGATTTTAATTGCCGaa         >  1:708011/1‑251 (MQ=255)
                                                                                                                                                                                                                                 ttattGAACAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAATATTCCGATTTTAATTGCCGaa         >  1:50944/1‑251 (MQ=255)
                                                                                                                                                                                                                                        aCAAAGCGTTTTCCCCTTGCAAAAAGATGATTTAAAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAATATTCCGATTTTAATTGCCGAATATTTCa  >  1:376526/1‑251 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                   
GTATTGAATTATCAAAACTTTCCGGTTTAGCGCCGGCATCCATTACATCGTTGAGCCGTTCCCTCATTGAAAAACGATTGATTATGGAAAAAACCTCAAGAAATACCGACAACCGCGGACGTCCTGCCATTGCCCTGTGTGTTTCGCCGTTTTATTGGCAAGCTTTATGTGCCACGTTAATGGAGGATCGGTTTGAAATTATTTTGAGTGAATTGGACGGCGTAATTATTGAACAAAGCATTTTCCCCTTGCAAAAAGATGATTTAGAATGTCTGGATAAATTTCTGGTAAAAAGCGTCAAACAATTTCTGGCTGAAACCCACTCACTTGCCCGCCCGATAACCTTTTCCGTTACCGTGGGCGGTGAATTGGATAAAAATGGTTATTTAATTAAACTGGGATGTACGAAATTCGCCCATTTGGATCTGAAATCCTTGTTTACACCGTATTTCAATATTCCGATTTTAATTGCCGAATATTTCA  >  1/1185917‑1186399

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑