| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,185,405 | T→C | intergenic (+25825/+235532) | unknown → / ← unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,185,405 | 0 | T | C | 98.2% | 127.0 / ‑5.8 | 54 | intergenic (+25825/+235532) | unknown/unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (27/26); minor base G (0/1); total (27/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.36e-01 | |||||||||||
ACCTTGTTCATGAAAGAAACGATGAATGGCTTGTGCCAAGCAATGACGAACACGGGCAACTGCACCGATAATATTGGTGCGCGGGCGTAGGTGCGCCACTTCGCGTAAATATTCGATAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTACCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGTGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAACGGCAAGAAAGGATAGGCCTGCTTTGGAGTCGCGACGGGTGCGCACCCAGCCGCGCACAGTCACTTTTTCGCCAATTGCAATTTTGCCTTGCAGCACATTTACAATTGATGCAATTTTTGTCATATATACC > 1/1185166‑1185643 | aCCTTGTTCATGAAAGAAACGATGAATGGCTTGTGCCAAGCAATGACGAACACGGGCAACTGCACCGATAATATTGGTGCGCGGGCGTAGGTGCGCCACTTCGCGTAAATATTCGATAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTACCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACgg > 1:209940/1‑251 (MQ=255) ttGTTCATGAAAGAAACGATGAATGGCTTGTGCCAAGCAATGACGAACACGGGCAACTGCACCGATAATATTGGTGCGCGGGCGTAGGTGCGCCACTTCGCGTAAATATTCGATAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTACCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGaac < 1:172298/251‑1 (MQ=255) gTTCATGAAAGAAACGATGAATGGCTTGTGCCAAGCAATGACGAACACGGGCAACTGCACCGATAATATTGGTGCGCGGGCGTAGGTGCGCCACTTCGCGTAAATATTCGATAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTACCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGaacaa > 1:616068/1‑251 (MQ=255) gATGAATGGCTTGTGCCAAGCAATGACGAACACGGGCAACTGCACCGATAATATTGGTGCGCGGGCGTAGGTGCGCCACTTCGCGTAAATATTCGATAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTACCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGt > 1:289307/1‑251 (MQ=255) ggCTTGTGCCAAGCAATGACGAACACGGGCAACTGCACCGATAATATTGGTGCGCGGGCGTAGGTGCGCCACTTCGCGTAAATATTCGATAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTACCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACtt > 1:612320/1‑251 (MQ=255) gtgCCAAGCAATGACGAACACGGGCAACTGCACCGATAATATTGGTGCGCGGGCGTAGGTGCGCCACTTCGCGTAAATATTCGATAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTACCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGAt > 1:809615/1‑251 (MQ=255) gtgCCAAGCAATGACGAACACGGGCAACTGCACCGATAATATTGGTGCGCGGGCGTAGGTGCGCCACTTCGCGTAAATATTCGATAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTACCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGAt > 1:231746/1‑251 (MQ=255) gACGAACACGGGCAACTGCACCGATAATATGGGTGGGCGGGCGTGGGTGCGCCACTTCGCATAAATATTCGATAGAGTGACGTTTTCCCGCCATCGGGTAAGTTTCGGAATCTTCTCCCCAACCGGTGACTTCCACTTTTCCCGTTTGTAATTCTACTGCCTGCCCTTCTGCCGGCGTTTCGCCTACGGTGCCGGCGACAACCACGGAACACCCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGc < 1:88768/250‑1 (MQ=255) gggCAACTGCACCGATAATATTGGTGCGCGGGCGTAGGTGCGCCACTTCGCGTAAATATTCGATAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTACCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCatta > 1:265040/1‑251 (MQ=255) ggCAACTGCACCGATAATATTGGTGGGCGGGCGTAGGTGCGCCCCTTCGCGTAAATATTCGATAGAGTGCCTTTTTGCCGCCATCGGGTAATTTTCCGGATCTTCTACCCACCCGGTGACTTCCATTTTTTCCGCTTGTAATTCTCCTGCCTGCCCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCatta < 1:864634/250‑1 (MQ=255) ggCAACTCCACCGATAATATTGGGGCGCGGGCGTAGGTGCGCCCCTTCGCGTAAATATTCGATAGAGTGACTTTTTGCCGCCATCGGGTAATTTTCCGGTTCTTCTCCCCACCCGGTGCCTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGCCCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACACCCACGGAACACCCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCacta < 1:344298/250‑4 (MQ=255) cAACTGCACCGATAATATTGGTGCGCGGGCGTAGGTGCGCCACTTCGCGTAAATATTCGATAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTACCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTAttt > 1:884315/1‑251 (MQ=255) cACCGATAATATTGGTGCGCGGGCGTAGGTGCGCCACTTCGCGTAAATATTCGATAGAGTGCCGTTTTGCCGCCATCGGGTAATTTTCGGGATCTTCTCCCCAACCGGTAGTTTCCATTTTTCCCGTTTGTAATTCTCCTGCCGCCCCTTCTGCCGGCGATTCGACTAGGGTGCCGGCGACACCCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAAt < 1:60379/250‑1 (MQ=255) agccGATAATATGGGTGCGGGGGGTTGGGGGCGCCCCTTCGCGTAAATATTCGAGAGAGTGGCGTTTGGCCGCCATCGGGTATGTTTCCGGATCTTCTCCCCACCCGGTGACTTCCTTTTTTTCCGTTTGTAATTCTACTGCCTGCCCTTCTGCCGGCGTTTCGCCTACGGTGCCGGCGAAAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAAt < 1:357240/248‑1 (MQ=255) taataTTGGTGCGCGGGCGTAGGTGCGCCACTTCGCGTAAATATTCGATAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTACCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGa > 1:899273/1‑251 (MQ=255) taataTGGGTGCGCGGGGGTAGGTGCGCCTCTTCGCGTAAATATTCGATAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTCCCCAACCGGTGACTTCCATTTTTCCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGCCTACGGTGCCGGCGAAAACCACGAAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTc < 1:351446/232‑1 (MQ=255) atatTGGTGCGCGGGCGTAGGTGCGCCACTTCGCGTAAATATTCGATAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTACCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGaac < 1:381675/184‑1 (MQ=255) atatGGGTGCGCGGGCGTAGGTGCGCCATTTCGCGTAAATATTCGATAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTCCCCACCCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGCCCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAAt < 1:570748/251‑1 (MQ=255) aaatgggTGCGGGGGCGGAGGGGCGCCTCTTCGCGTAAATATCCGATAGAGTGACGTTTTGCCGCCATCGGTTAATTTCCCGGATCTTCTCCCCACCCGGTTACTCCCTCTTTTCCCGTTTGTAATTCTCCTCCCTGCCCTTCTGCGGGCTATTCGACTACGGTGCCGGCAACACCCACGGAACACCCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAAt < 1:658580/246‑1 (MQ=255) tatTGGTGCGCGGGCGTAGGTGCGCCCCTTCGCGTAAATATTCGATAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTCCCCAACCGGTGACTTCCTCTTTTTCCGCTTGTAATTCTACTGCCTGCCCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACACCCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATg < 1:343894/251‑1 (MQ=255) gTGCGCGGGCGTAGGTGCGCCACTTCGCGTAAATATTCGATAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTACCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTg > 1:419250/1‑250 (MQ=255) ggCGTGGGTGCGCCACTTCGCGTAAATATTCGATAGGGTGCCTTTTTGCCGCCACCGGGTAATTTTCCGGATCTTCTCCCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTCCTGCCTGCCCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACACCCACGAAACAACCCGCCGTTAAGCGTAAAAc < 1:593643/193‑1 (MQ=255) ggCGTAGGTGCGCCACTTCGCGTAAATATTCGATAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTACCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATggg > 1:108494/1‑241 (MQ=255) ggCGTAGGTGCGCCACTTCGCGTAAATATTCGATAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTACCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCaa > 1:701714/1‑251 (MQ=255) ggCGTAGGTGCGCCACTTCGCGTAAATATTCGATAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTACCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCaa > 1:593911/1‑251 (MQ=255) gCGTAGGTGCGCCACTTCGCGTAAATATTCGATAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTACCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAg > 1:713649/1‑251 (MQ=255) atatTCGATAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTCCCCACCCGGTGACTTCCACTTTTCCCGCTTGTAATTCTCCTGCCTGCCCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACACCCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAg < 1:77636/223‑1 (MQ=255) atatTCGATAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTACCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAACGGCAAGAAAgg > 1:160585/1‑251 (MQ=255) atTCGATAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTACCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAAc > 1:702048/1‑238 (MQ=255) ttCGATAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTACCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAACGGCAAGaa > 1:620142/1‑245 (MQ=255) ataggttGACTTTTTCCCGCCATCGGTTAATTTTCCGGATTTTCTACCCACCCGGTGCCTTCCATTTTTTCCGTTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAACGGCAAGAAAGGATAGGcc < 1:748629/245‑1 (MQ=255) aTAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTCCCCAACCGGTGACTTCCACTTTTCCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAACGGCAAGAAAGGATAGGcc < 1:308014/251‑1 (MQ=255) agggtggcGTTTTGCCGCCTTGGGTTAAGTTTCCGTTTCTCCCCCCCACCGGGTGCCTCCCATTTTTTCCGCTTGAAATTCTCGTGCCTGACCTTCGGCGGGGGTTTCGACTGGGGTGCGGGGGACACCCGCGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAACGGCAAGAAAGGATAGGcc < 1:304953/242‑1 (MQ=255) tGACGTTTTGCCGCCATGGGTTAATTTTCCGGTTCTTCTACCCAACCGGTGTCTTCCATTTTTTCCGCTTGTAATTCTCCTGCCTGCCCTTCTGCCGGGGATTCGCCTGCGGTGCGGGCGACACCCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAACGGCAAGAAAGGATAGGCCTGCtt < 1:2085/250‑1 (MQ=255) aCGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTACCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAACGGCAAGAAAGGATAGGCCTGCTTTgg > 1:645869/1‑251 (MQ=255) cATCGGGTAAGTTTCCGGATCTTCTACCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAACGGCAAGAAAGGATAGGCCTGCTTTGGAGTCGCGACggg > 1:619980/1‑251 (MQ=255) aTCTTCTACCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAACGGCAAGAAAGGATAGGCCTGCTTTGGAGTCGCGACGGGTGCGCACCCAGCCGCGca > 1:597043/1‑251 (MQ=255) tcttctACCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAAt > 1:584750/1‑167 (MQ=255) cttctCCCCAACCGGTGCCTCCCACTTTTTCCGCTTTTAATTCTCCTCCCTGCCCTTCTGCCGGCGATTCGACTACGGTGCCGGCCACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAACGGCAAGAAAGGATAGGcc < 1:640501/211‑1 (MQ=255) cTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAACGGCAAGAAAGGATAGGCCTGCTTTGGAGTCGCGACGGGTGCGCACCCAGCCGCGCACAGTCACTTTTTCGCCAATTGCAAtt > 1:299185/1‑251 (MQ=255) ttaatttCTCCTGCCGGACCTTCTGCCGGCGATTCGACTGCGGTGCGGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAACGGCAAGAAAGGATAGGCCTGCTTTGGAGTCGCGACGGGTGCGCACCCAGCCGCGCACAGTCACTTTTTCGCCAATTGCAATTTTGCCTTgcag < 1:688100/246‑1 (MQ=255) tAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAACGGCAAGAAAGGATAGGCCTGCTTTGGAGTCGCGACGGGTGCGCACCCAGCCGCGCACAGTCACTTTTTCGCCAATTGCAATTTTGCCTTgcagca > 1:785014/1‑251 (MQ=255) aTTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAACGGCAAGAAAGGATAGGCCTGCTTTGGAGTCGCGACGGGTGCGCACCCAGCCGCGCACAGTCACTTTTTCGCCAATTGCAATTTTGCCTTGCAGcaca > 1:387583/1‑251 (MQ=255) cgccggACCTCCTGCCGGCGATTCGACTACGGGGCGGGCGACAACCACGGAACACCCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAACGGCAAGAAAGGATAGGCCTGCTTTGGAGTCGCGACGGGTGCGCACCCAGCCGCGCACAGTCACTTTTTCGCCAATTGCAATTTTGCCTTGCAGCACATTTACaa < 1:269176/246‑1 (MQ=255) gCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAAc > 1:314915/1‑136 (MQ=255) gCCTGACCTTCTGCCGGCGATTCGACTACGGGGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAAc > 1:518763/1‑146 (MQ=255) cccTGCCCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAACGGCAAGAAAGGATAGGCCTGCTTTGGAGTCGCGACGGGTGCGCACCCAGCCGCGCACAGTCACTTTTTCGCCAATTGCAATTTTGCCTTGCAGCACATTTACAAt < 1:481043/250‑1 (MQ=255) cccTGCCCTTCTGCCGGCGATTCGACTACGGTGCCGGCGACAACCACGAAACACCCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAACGGCAAGAAAGGATAGGCCTGCTTTGGAGTCGCGACGGGTGCGCACCCAGCCGCGCACAGTCACTTTTTCGCCAATTGCAATTTTGCCTTGCAGCACATTTACAAt < 1:598073/250‑1 (MQ=255) ccTGACCTTCGGCCGGCGATTCGACTAGGGTGCCGGCGACAACCAGGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAACGGCAAGAAAGGATAGGCCTGCTTTGGAGTCGCGACGGGTGCGCACCCAGCCGCGCACAGTCACTTTTTCGCCAATTGCAATTTTGCCTTGCAGCACATTTACAAt < 1:877566/250‑1 (MQ=255) gATTCGACTACGGTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAACGGCAAGAAAGGATAGGCCTGCTTTGGAGTCGCGACGGGTGCGCACCCAGCCGCGCACAGTCACTTTTTCGCCAATTGCAATTTTGCCTTGCAGCACATTTACAATTGATGCAATTTTTGTCat > 1:236849/1‑251 (MQ=255) cGACTACGGGGCCGGCGACACCCCCGGAACACCCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAACGGCAAGAAAGGATAGGCCTGCTTTGGAGTCGCGACGGGTGCGCACCCAGCCGCGCACAGTCACTTTTTCGCCAATTGCAATTTTGCCTTGCAGCACATTTACAATTGATGCAATTTTTGTCatatat < 1:661008/251‑1 (MQ=255) cGACTACGGGGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAACGGCAAGAAAGGATAGGCCTGCTTTGGAGTCGCGACGGGTGCGCACCCAGCCGCGCACAGTCACTTTTTCGCCAATTGCAATTTTGCCTTGCAGCACATTTACAATTGATGCAATTTTTGTCatatat < 1:38355/251‑1 (MQ=255) ctagggTGCCGGCGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAACGGCAAGAAAGGATAGGCCTGCTTTGGAGTCGCGACGGGTGCGCACCCAGCCGCGCACAGTCACTTTTTCGCCAATTGCAATTTTGCCTTGCAGCACATTTACAATTGATGCAATTTTTGTCATATATAcc < 1:392147/247‑1 (MQ=255) cTACGGTGCGGGCGACACCCACGGAACACCCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAACGGCAAGAAAGGATAGGCCTGCTTTGGAGTCGCGACGGGTGCGCACCCAGCCGCGCACAGTCACTTTTTCGCCAATTGCAATTTTGCCTTGCAGCACATTTACAATTGATGCAATTTTTGTCATATATAcc < 1:465781/251‑1 (MQ=255) | ACCTTGTTCATGAAAGAAACGATGAATGGCTTGTGCCAAGCAATGACGAACACGGGCAACTGCACCGATAATATTGGTGCGCGGGCGTAGGTGCGCCACTTCGCGTAAATATTCGATAGAGTGACGTTTTGCCGCCATCGGGTAAGTTTCCGGATCTTCTACCCAACCGGTGACTTCCACTTTTTCCGCTTGTAATTCTACTGCCTGACCTTCTGCCGGCGATTCGACTACGGTGCCGGTGACAACCACGGAACAACCCGCCGTTAAGCGTAAAACTTCAGATTCATAATTGGCAATGTCATTATTTACAATAGCTTGAATGGGTGCGAAGCAAGAACCGTCATAAACGGCAAGAAAGGATAGGCCTGCTTTGGAGTCGCGACGGGTGCGCACCCAGCCGCGCACAGTCACTTTTTCGCCAATTGCAATTTTGCCTTGCAGCACATTTACAATTGATGCAATTTTTGTCATATATACC > 1/1185166‑1185643 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |