Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,180,891 C→T intergenic (+21311/+240046) unknown → / ← unknown tRNA‑Val‑GAC/tRNA‑Met‑CAT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,180,8910CT100.0% 193.0 / NA 72intergenic (+21311/+240046)unknown/unknowntRNA‑Val‑GAC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (35/37);  total (35/37)

ATAAGCCGAGCTTTTTGACCTTAGATGAAATTCGTCGTTTGGTGAATAGTTTCAGCATTATGGGAACGGAAAAAGTACGCCTCACCGGCGGCGAACCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAACGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATGACAAGGATTTTTCTGGTTTTCTGGCGTGGATTAAAGATAAGCCCATTCAGATGCGTTTTATCGAATTAATGCAAACCGGCGAGATGAATGCTTT  >  1/1180653‑1181133
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                  
aTAAGCCGAGCTTTTTGACCTTAGATGAAATTCGTCGTTTGGTGAATAGTTTCAGCATTATGGGAACGGAAAAAGTACGCCTCACCGGCGGCGAACCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGAc                                                                                                                                                                                                                                        <  1:225079/251‑1 (MQ=255)
          cTTTTTGACCTTAGATGAAATTCGTCGTTTGGTGAATAGTTTCAGCATTATGGGAACGGAAAAAGTACGCCTCACCGGCGGCGAACCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGa                                                                                                                                                                                                                                <  1:892199/249‑1 (MQ=255)
          cTTTTTGACCTTAGATGAAATTCGTCGTTTGGTGAATAGTTTCAGCATTATGGGAACGGAAAAAGTACGCCTCACCGGCGGCGAACCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATg                                                                                                                                                                                                                              <  1:41696/251‑1 (MQ=255)
           tttttGACCTTAGATGAAATTCGTCGTTTGGTGAATAGTTTCAGCATTATGGGAACGGAAAAAGTACGCCTCACCGGCGGCGAACCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGAc                                                                                                                                                                                                                                        >  1:799866/1‑240 (MQ=255)
            ttttGACCTTAGATGAAATTCGTCGTTTGGTGAATAGTTTCAGCATTATGGGAACGGAAAAAGTACGCCTCACCGGCGGCGAACCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGt                                                                                                                                                                                                                             >  1:748241/1‑250 (MQ=255)
                            aaTTCGTCGTTTGGTGAATAGTTTCAGCATTATGGGAACGGAAAAAGTACGCCTCACCGGCGGCGAACCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGa                                                                                                                                                                                                            <  1:280222/251‑1 (MQ=255)
                                  tcgtTTGGTGAATAGTTTCAGCATTATGGGAACGGAAAAAGTACGCCTCACCGGCGGCGAACCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTAcc                                                                                                                                                                                                       <  1:508075/250‑1 (MQ=255)
                                   cgtTTGGTGAATAGTTTCAGCATTATGGGAACGGAAAAAGTACGCCTCACCGGCGGCGAACCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCgg                                                                                                                                                                                                     <  1:297226/251‑1 (MQ=255)
                                   cgtTTGGTGAATAGTTTCAGCATTATGGGAACGGAAAAAGTACGCCTCACCGGCGGCGAACCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCgg                                                                                                                                                                                                     <  1:268247/251‑1 (MQ=255)
                                    gtTTGGTGAATAGTTTCAGCATTATGGGAACGGAAAAAGTACGCCTCACCGGCGGCGAACCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAACACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGAc                                                                                                                                                                                                                                        >  1:450734/1‑215 (MQ=255)
                                      ttGGTGAATAGTTTCAGCATTATGGGAACGGAAAAAGTACGCCTCACCGGCGGCGAACCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGAc                                                                                                                                                                                                                                        <  1:459398/213‑1 (MQ=255)
                                        ggTGAATAGTTTCAGCATTATGGGAACGGAAAAAGTACGCCTCACCGGCGGCGAACCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAg                                                                                                                                                                                                >  1:888507/1‑251 (MQ=255)
                                                gTTTCAGCATTATGGGAACGGAAAAAGTACGCCTCACCGGCGGCGAACCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAAttt                                                                                                                                                                                        >  1:611430/1‑251 (MQ=255)
                                                 tttCAGCATTATGGGAACGGAAAAAGTACGCCTCACCGGCGGCGAACCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAAtt                                                                                                                                                                                         <  1:581509/249‑1 (MQ=255)
                                                      gCATTATGGGAACGGAAAAAGTACGCCTCACCGGCGGCGAACCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTtgatga                                                                                                                                                                                   >  1:237454/1‑250 (MQ=255)
                                                      gCATTATGGGAACGGAAAAAGTACGCCTCACCGGCGGCGAACCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTtgatga                                                                                                                                                                                   >  1:828935/1‑250 (MQ=255)
                                                      gCATTATGGGAACGGAAAAAGTACGCCTCACCGGCGGCGAACCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTtgatga                                                                                                                                                                                   >  1:197523/1‑250 (MQ=255)
                                                        aTTATGGGAACGGAAAAAGTACGCCTCACCGGCGGCGAACCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACAt                                                                                                                                                                                >  1:27194/1‑251 (MQ=255)
                                                                          gTACGCCTCACCGGCGGCGAACCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATcg                                                                                                                                                              >  1:784740/1‑251 (MQ=255)
                                                                           tACGCCTCACCGGCGGCGAACCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATc                                                                                                                                                               <  1:202830/249‑1 (MQ=255)
                                                                               ccTCACCGGCGGCGAACCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGc                                                                                                                                                                           <  1:671064/233‑1 (MQ=255)
                                                                                     cggcggCGAACCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAAt                                                                                                                                                   <  1:134675/251‑1 (MQ=255)
                                                                                           cgAACCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAATCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGc                                                                                                                                              <  1:452023/250‑1 (MQ=255)
                                                                                             aaCCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTAt                                                                                                                                           >  1:131379/1‑251 (MQ=255)
                                                                                               ccTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCa                                                                                                                                         >  1:871691/1‑251 (MQ=255)
                                                                                                       ccGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAAtt                                                                                                                                                                                         >  1:440892/1‑195 (MQ=255)
                                                                                                                 tttCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTc                                                                                                                       <  1:173656/251‑1 (MQ=255)
                                                                                                                           ttGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCtgatg                                                                                                             >  1:262806/1‑251 (MQ=255)
                                                                                                                                    cGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTa                                                                                                    >  1:781995/1‑251 (MQ=255)
                                                                                                                                             aaaTTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGc                                                                                                                                                                           <  1:849094/171‑1 (MQ=255)
                                                                                                                                                      gTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTc                                                                                                                       <  1:215495/214‑1 (MQ=255)
                                                                                                                                                      gTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATg                                                                                                >  1:343819/1‑237 (MQ=255)
                                                                                                                                                      gTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATg                                                                                                <  1:569807/237‑1 (MQ=255)
                                                                                                                                                          tAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATGACAAGGATttttccggtt                                                                              >  1:77332/1‑251 (MQ=255)
                                                                                                                                                                    gCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGAt                                                                                                                                                                <  1:451474/159‑1 (MQ=255)
                                                                                                                                                                    gCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTc                                                                                                                       >  1:63196/1‑200 (MQ=255)
                                                                                                                                                                    gCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAg                                                                                                         >  1:275129/1‑214 (MQ=255)
                                                                                                                                                                    gCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGa                                                                                                        <  1:568095/215‑1 (MQ=255)
                                                                                                                                                                    gCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATGACAAGGATTTTTCCGGTTTTCTGGCGTg                                                                    >  1:225169/1‑251 (MQ=255)
                                                                                                                                                                            caccaATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGAt                                                                                                                                                                <  1:211115/151‑1 (MQ=255)
                                                                                                                                                                            caccaATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATGACAAGGATTTTTCCGGTTTTCTGGCGTGGATTAAAg                                                            <  1:656990/251‑1 (MQ=255)
                                                                                                                                                                             accaATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATGACAAGGATTTTTCCGGTTTTCTGGCGTGGATTAAAGa                                                           <  1:711313/251‑1 (MQ=255)
                                                                                                                                                                             accaATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATGACAAGGATTTTTCCGGTTTTCTGGCGTGGATTAAAGa                                                           <  1:38718/251‑1 (MQ=255)
                                                                                                                                                                             accaATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATGACAAGGATTTTTCCGGTTTTCTGGCGTGGATTAAAGa                                                           <  1:338485/251‑1 (MQ=255)
                                                                                                                                                                              ccaATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCtgatg                                                                                                             >  1:504170/1‑200 (MQ=255)
                                                                                                                                                                              ccaATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTATATGa                                                                                               >  1:745664/1‑214 (MQ=255)
                                                                                                                                                                                    gATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATGACAAGGATTTTTCCGGTTTTCTGGCGTGGATTAAAGATAAGcc                                                     <  1:750411/250‑1 (MQ=255)
                                                                                                                                                                                    gATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATGACAAGGATTTTTCCGGTTTTCTGGCGTGGATTAAAGATAAGcc                                                     <  1:738819/250‑1 (MQ=255)
                                                                                                                                                                                     aTTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATGACAAGGATTTTTCCGGTTTTCTGGCGTGGATTAAAGATAAGccc                                                    <  1:102081/250‑1 (MQ=255)
                                                                                                                                                                                              ggttgggagatgtgtataggagAAAGATGCCGGCATTACAACCATTAATGTAAGTGTTGACAGTTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTGGAAGGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGAGGAAAGACTTAAATGACAAGGATTTTTCCGGTTTTCTGGCGTGGATTAAAGATAAGCCCATTCAGATg                                           <  1:798514/229‑1 (MQ=255)
                                                                                                                                                                                                 aaaaGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTtgatg                                                                                                                                                                                    >  1:352163/1‑110 (MQ=255)
                                                                                                                                                                                                 aaaaGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATGACAAGGATTTTTCCGGTTTTCTGGCGTGGATTAAAGATAAGCCCATTCAGATGCGtt                                       >  1:74176/1‑251 (MQ=255)
                                                                                                                                                                                                      aCGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATg                                                                                                <  1:635882/189‑1 (MQ=255)
                                                                                                                                                                                                      aCGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATGACAAGGATTTTTCCGGTTTTCTGGCGTGGATTAAAGa                                                           <  1:606771/226‑1 (MQ=255)
                                                                                                                                                                                                      aCGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATGACAAGGATTTTTCCGGTTTTCTGGCGTGGATTAAAGATAAGCCCATTCAGATGCGTTTTATc                                  <  1:732108/251‑1 (MQ=255)
                                                                                                                                                                                                       cGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGc                                                                                                                                                                           >  1:346440/1‑113 (MQ=255)
                                                                                                                                                                                                                  ggAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCg                                                                                                                                                                          >  1:493148/1‑103 (MQ=255)
                                                                                                                                                                                                                  ggAAAAATGCCGGCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATGACAAGGATTTTTCCGGTTTTCTGGCGTGGATTAAAGATAAGTCCATTCAGATGCGTTTTATCGAATTAATGCaa                      >  1:693550/1‑251 (MQ=255)
                                                                                                                                                                                                                              gCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACgg                                                                                                                                                                                                             <  1:502647/56‑1 (MQ=255)
                                                                                                                                                                                                                              gCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTAcc                                                                                                                                                                                                       <  1:87694/62‑1 (MQ=255)
                                                                                                                                                                                                                              gCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATGACAAGGATTTTTCCGGTTTTCTGGCGTGGATTAAAGa                                                           >  1:115603/1‑202 (MQ=255)
                                                                                                                                                                                                                              gCATTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATGACAAGGATTTTTCCGGTTTTCTGGCGTGGATTAAAGATAAGCCCATTCAGATGCGTTTTATCGAATTAATGCAAACCGGCGAGATg          >  1:106497/1‑251 (MQ=255)
                                                                                                                                                                                                                                aTTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTc                                                                                                                       <  1:515034/140‑1 (MQ=255)
                                                                                                                                                                                                                                aTTACATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATGACAAGGATTTTTCCGGTTTTCTGGCGTGGATTAAAGATAAGCCCATTCAGATGCGTTTTATCGAATTAATGCAAACCGGCGAGATGaa        >  1:496531/1‑251 (MQ=255)
                                                                                                                                                                                                                                   aCATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATGACAAGGATTTTTCCGGTTTTCTGGCGTGGATTAAAGAt                                                          >  1:54511/1‑198 (MQ=255)
                                                                                                                                                                                                                                   aCATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATGACAAGGATTTTTCCGGTTTTCTGGCGTGGATTAAAGATAAGCCCATTCAGATGCGTTTTATCGAATTAATGCAAACCGGCGAGATGAATg      >  1:308028/1‑250 (MQ=255)
                                                                                                                                                                                                                                    cATCCATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATGACAAGGATTTTTCCGGTTTTCTGGCGTGGATTAAAGATAAGCCCATTCAGATGCGTTTTATCGAATTAATGCAAACCGGCGAGATGAATg      >  1:141506/1‑249 (MQ=255)
                                                                                                                                                                                                                                       ccATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATGACAAGGATTTTTCCGGTTTTCTGGCGTGGATTAAAGa                                                           >  1:136640/1‑193 (MQ=255)
                                                                                                                                                                                                                                       ccATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATGACAAGGATTTTTCCGGTTTTCTGGCGTGGATTAAAGATAAGCCCATTCAGATGCGTTTTATCGAATTAATGCAAAcc                   <  1:118955/233‑1 (MQ=255)
                                                                                                                                                                                                                                       ccATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATGACAAGGATTTTTCCGGTTTTCTGGCGTGGATTAAAGATAAGCCCATTCAGATGCGTTTTATCGAATTAATGCAAACCGGCGAGATGAATGCttt  >  1:369999/1‑250 (MQ=255)
                                                                                                                                                                                                                                        cATTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATGACAAGGATttttccggttttctgg                                                                        <  1:697329/179‑1 (MQ=255)
                                                                                                                                                                                                                                         aTTAATGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAAt                                                                                                 <  1:4479/153‑1 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                  
ATAAGCCGAGCTTTTTGACCTTAGATGAAATTCGTCGTTTGGTGAATAGTTTCAGCATTATGGGAACGGAAAAAGTACGCCTCACCGGCGGCGAACCTACGCTCCGCAAGGATTTTCTCGCTATTGCTGAAACGATCAGCCAAATTGAAGGTATTAAACAAATTGCCTTAACCACCAATGGATTTCGTTTATTAAAAGACGTTGAGCACTGGAAAAATGCCGGCATTACATCCATTAACGTAAGTGTTGACAGCTTGGATGTCAGAATGTTCCAACGGATTACCGGCGTAGATAAATTTGATGACATTATGCGTGGCATTGATCGCGCTTTTGAATGCGGCTATCAAAAAATCAAAGTAAATTCCGTGCTGATGAAAGACTTAAATGACAAGGATTTTTCTGGTTTTCTGGCGTGGATTAAAGATAAGCCCATTCAGATGCGTTTTATCGAATTAATGCAAACCGGCGAGATGAATGCTTT  >  1/1180653‑1181133

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑