| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,176,342 | T→C | intergenic (+16762/+244595) | unknown → / ← unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,176,342 | 0 | T | C | 98.2% | 158.9 / ‑3.1 | 57 | intergenic (+16762/+244595) | unknown/unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (28/28); minor base . (0/1); total (28/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.05e-01 | |||||||||||
GTGCCAAAGTGCAGCTGAAAAATCCTGACGTGACGGTACGCATTGAAATTGAAGACGACAAAATGATGCTGGTACGCGCCCGTTATGAAGGCATCGGCGGCTACCCAATTGGCACGCAGGAAGACGTGCTGTCGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCATGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGTGCTTAAACGCATGATGGTACGTGCCGCGTCTAAAATTGCCCAACGTTTCGACATTCAGGCGATCGTCACCGGTGAGGCGTTAGGACAGGTTTCCAGCCAAACCTT > 1/1176107‑1176587 | gTGCCAAAGTGCAGCTGAAAAATCCTGACGTGACGGTACGCATTGAAATTGAAGACGACAAAATGATGCTGGTACGCGCCCGTTATGAAGGCATCGGCGGCTACCCAATTGGCACGCAGGAAGACGTGCTGTCGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGaaa > 1:162113/1‑251 (MQ=255) tGCCAAAGTGCAGCTGAAAAATCCTGACGTGACGGTACGCATTGAAATTGAAGACGACAAAATGATGCTGGTACGCGCCCGTTATGAAGGCATCGGCGGCTACCCAATTGGCACGCAGGAAGACGTGCTGTCGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAAc < 1:617023/251‑1 (MQ=255) ccAAAGTGCAGCTGAAAAATCCTGACGTGACGGTACGCATTGAAATTGAAGACGACAAAATGATGCTGGTACGCGCCCGTTATGAAGGCATCGGCGGCTACCCAATTGGCACGCAGGAAGACGTGCTGTCGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACaa > 1:221250/1‑251 (MQ=255) tGAAAAATCCTGACGTGACGGTACGCATTGAAATTGAAGACGACAAAATGATGCTGGTACGCGCCCGTTATGAAGGCATCGGCGGCTACCCAATTGGCACGCAGGAAGACGTGCTGTCGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATcac < 1:880567/251‑1 (MQ=255) tCCTGACGTGACGGTACGCATTGAAATTGAAGACGACAAAATGATGCTGGTACGCGCCCGTTATGAAGGCATCGGCGGCTACCCAATTGGCACGCAGGAAGACGTGCTGTCGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGc < 1:588797/251‑1 (MQ=255) tgacgGTACGCATTGAAATTGAAGACGACAAAATGATGCTGGTACGCGCCCGTTATGAAGGCATCGGCGGCTACCCAATTGGCACGCAGGAAGACGTGCTGTCGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTa > 1:671/1‑250 (MQ=255) gCATTGAAATTGAAGACGACAAAATGATGCTGGTACGCGCCCGTTATGAAGGCATCGGCGGCTACCCAATTGGCACGCAGGAAGACGTGCTGTCGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCa < 1:117916/235‑1 (MQ=255) cATTGAAATTGAAGACGACAAAATGATGCTGGTACGCGCCCGTTATGAAGGCATCGGCGGCTACCCAATTGGCACGCAGGAAGACGTGCTGTCGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACAt < 1:840723/228‑1 (MQ=255) cATTGAAATTGAAGACGACAAAATGATGCTGGTACGCGCCCGTTATGAAGGCATCGGCGGCTACCCAATTGGCACGCAGGAAGACGTGCTGTCGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCg > 1:96439/1‑250 (MQ=255) aattgaaGACGACAAAATGATGCTGGTACGCGCCCGTTATGAAGGCATCGGCGGCTACCCAATTGGCACGCAGGAAGACGTGCTGTCGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAg < 1:660755/251‑1 (MQ=255) cAAAATGATGCTGGTACGCGCCCGTTATGAAGGCATCGGCGGCTACCCAATTGGCACGCAGGAAGACGTGCTGTCGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTgg < 1:351694/251‑1 (MQ=255) atgatgCTGGTACGCGCCCGTTATGAAGGCATCGGCGGCTACCCAATTGGCACGCAGGAAGACGTGCTGTCGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAg < 1:668179/224‑1 (MQ=255) cccGTTATGAAGGCATCGGCGGCTACCCAATTGGCACGCAGGAAGACGTGCTGTCGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGc < 1:871784/206‑1 (MQ=255) ccGTTATGAAGGCATCGGCGGCTACCCAATTGGCACGCAGGAAGACGTGCTGTCGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCgtgg < 1:617290/251‑1 (MQ=255) gTTATGAAGGCATCGGCGGCTACCCAATTGGCACGCAGGAAGACGTGCTGTCGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGcac < 1:553016/212‑1 (MQ=255) gTTATGAAGGCATCGGCGGCTACCCAATTGGCACGCAGGAAGACGTGCTGTCGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCgtggtg > 1:239797/1‑251 (MQ=255) gTTATGAAGGCATCGGCGGCTACCCAATTGGCACGCAGGAAGACGTGCTGTCGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGGTTTGTGGCGATTAATTTTGAAGGCgtggtg > 1:556441/1‑251 (MQ=255) cggcTACCCAATTGGCACGCAGGAAGACGTGCTGTCGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCCGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGaa < 1:449017/250‑1 (MQ=255) aCCCAATTGGCACGCAGGAAGACGTGCTGTCGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTtg > 1:784406/1‑204 (MQ=255) aaTTGGCACGCAGGAAGACGTGCTGTCGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGc < 1:472201/178‑1 (MQ=255) ggCACGCAGGAAGACGTGCTGTCGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGGAAACGGGGATAACgg > 1:271216/1‑251 (MQ=255) cAGGAAGACGTGCTGTCGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGaa < 1:687108/231‑1 (MQ=255) aaGACGTGCTGTCGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGGTTAATTTTGAAGGCGTGGTTGGCGAGGTTCTGGAAAACGTGGGTTACGGACAAAttggg > 1:275770/1‑247 (MQ=255) gTCGTTGATTTCCGGCGGGTTTGATTCAGGAGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATTGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTTTGGCGAGTAATTTTTCAGGCGTGGTGGGGGGGACTCCGGAAAACGTGGATAACGGGCAAATTGGCGGGGTGCTTa > 1:155466/1‑251 (MQ=255) cGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGTGCTTaaa < 1:577860/251‑1 (MQ=255) gggTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGaa > 1:255980/1‑201 (MQ=255) gTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGTGCTTaaa < 1:581363/235‑1 (MQ=255) aTTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGc < 1:626241/131‑1 (MQ=255) aTTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGc < 1:670414/131‑1 (MQ=255) tgtCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGTGCTTAAACGCATGATGGTACGTGCCGCGTCTAAAAt < 1:591185/250‑1 (MQ=255) gtCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGc > 1:364840/1‑121 (MQ=255) gtCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGTGCTTAAACGCATGATGGTACGTGCCGCGTCTAAAAt > 1:485246/1‑249 (MQ=255) gtCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGGGGTTAAAc > 1:393821/1‑221 (MQ=255) cAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGGGGGGCTTAAACGCATGATGGGACGTGCCGCGGCTaaaa > 1:459763/1‑245 (MQ=255) gCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGc < 1:616157/116‑1 (MQ=255) gCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGTGCTTAAACg < 1:484242/217‑1 (MQ=255) gCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGTGCTTAAACGCATGATGGTACGTGCCGCGTCTAAAATTGcccca > 1:587336/1‑249 (MQ=255) gCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGTGCTTAAACGCATGATGGTACGTGCCGCGTCTAAAATTGCCCaa > 1:737613/1‑251 (MQ=255) gCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGGGCTTAAACGCATGATGGTACGTGCCGCGTCTAAAATTGCCCaa > 1:479613/1‑251 (MQ=255) gCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGGGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGGGCTTAAACGCATGATGGTACGTGCCGCGTCTAAAATTGCCCaa > 1:577423/1‑251 (MQ=255) tGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGTGCTTAAACGCATGATGGTACGTGCCGCGTCTAAAATTGCCCAACGTTTCGAc < 1:668823/251‑1 (MQ=255) cgGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGTGCTTAAACGCATGATGGTACGTGCCGCGTCTAAAATTGCCCAACGTTTCGAc > 1:177448/1‑241 (MQ=255) gTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGTGCTTAAACGCATGATGGTACGTGcc < 1:604579/204‑1 (MQ=255) gTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGGGCTTAAACGCATGATGGTACGTGCCGCGTCTAAAATTGCCCAACGTTTCGACATTCAGGAGATCGTCACCgg > 1:693706/1‑251 (MQ=255) cATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACACAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAAAGTGGATAACGGACAAATGGGCGTGGTGCTTAAACGCCTGATGGTACGTGCCGCGTCTAAAATTGCCCAACGTTTCGACCTTCAGGCGATCGTCCCCGGTgg > 1:669361/1‑250 (MQ=255) cATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGTGCTTAAACGCATGATGGTACGTGCCGCGTCTAAAATTGCCCAACGTTTCGACATTCAGGCGATCGTCACCGGTGa > 1:562275/1‑251 (MQ=255) cATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGTGCTTAAACGCATGATGGTACGTGCCGCGTCTAAAATTGCCCAACGTTTCGACATTCAGGCGATCGTCACCGGTGa < 1:309454/251‑1 (MQ=255) tcttTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCg < 1:504185/162‑1 (MQ=255) cttTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGTGCTTAAACGCATGATGGTACGTGCCGCGTCTAAAATTGCCCAACGTTTCGACATTCAGGCGATCGTCACCGGTGAGGCGTTAGGAc < 1:75792/251‑1 (MQ=255) cttTAATTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGGGCTTAAACGCATGATGGTACGTGCCGCGTCTAAAAt > 1:511371/1‑201 (MQ=255) aaTTTAGGCGGCGCGGCGCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGTGCTTAAACGCATGATGGTACGTGCCGCGTCTAAAATTGCCCAACGTTTCGACATTCAGGCGATCGTCACCGGTGAGGCGTTAGGACAGGt > 1:647642/1‑251 (MQ=255) gcggcgcggcGCA‑CAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGTGCTTAAACGCATGATGGTACGTGCCGCGTCTAAAATTGCCCAACGTTTCGACATTCAGGCGATCGTCACCGGTGAGGCGTTAGGACAGGTTTCCAGc < 1:748722/250‑1 (MQ=255) cggcgcggcgCACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGTGCTTAAACGCATGATGGTACGTGCCGCGTCTAAAATTGCCCAACGTTTCGACATTCAGGCGATCGTCACCGGTGAGGCGTTAGGACAGGTTTCCAGc < 1:157146/250‑1 (MQ=255) cggcgcACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGTGCTTAAACGCATGATGGTACGTGCCGCGTCTAAAATTGCCCAACGTTTCGACATTCAGGCGATCGTCACCGGTGAGGCGTTAGGACAGGTTTCCAGCCAAAcc < 1:239002/251‑1 (MQ=255) ggcgcACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGTGCTTAAACGCATGATgg > 1:151196/1‑164 (MQ=255) gcgcACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCgtggtg > 1:477189/1‑147 (MQ=255) gcgcACGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGTGCTTAAACGCATGATGGTACGTGCCGCGTCTAAAATTGCCCAACGTTTCGACATTCAGGCGATCGTCACCGGTGAGGCGTTAGGACAGGGTTCCAGCCAAACCtt > 1:510299/1‑251 (MQ=255) | GTGCCAAAGTGCAGCTGAAAAATCCTGACGTGACGGTACGCATTGAAATTGAAGACGACAAAATGATGCTGGTACGCGCCCGTTATGAAGGCATCGGCGGCTACCCAATTGGCACGCAGGAAGACGTGCTGTCGTTGATTTCCGGCGGGTTTGATTCAGGTGTGTCCAGCTATATGCTGTTGCGTCGCGGTTCGCGCGTACATTATTGCTTCTTTAATTTAGGCGGCGCGGCGCATGAAATCGGCGTGAAACAAATGGCGTATCACATTTGGCAACGTTACGGCAGCTCGCACAAAGTGCGTTTTGTGGCGATTAATTTTGAAGGCGTGGTGGGCGAGATTCTGGAAAACGTGGATAACGGACAAATGGGCGTGGTGCTTAAACGCATGATGGTACGTGCCGCGTCTAAAATTGCCCAACGTTTCGACATTCAGGCGATCGTCACCGGTGAGGCGTTAGGACAGGTTTCCAGCCAAACCTT > 1/1176107‑1176587 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |