| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,143,648 | C→T | intergenic (+6599/‑15856) | unknown → / → unknown | LSU rRNA ## 23S rRNA, large subunit ribosomal RNA/tRNA‑Val‑GAC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,143,648 | 0 | C | T | 100.0% | 212.6 / NA | 79 | intergenic (+6599/‑15856) | unknown/unknown | LSU rRNA ## 23S rRNA, large subunit ribosomal RNA/tRNA‑Val‑GAC |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (45/34); total (45/34) | |||||||||||
CCAAACACATGTCCGATGAAACCGCACATGTGATCGATGAGGAAGTTCGTGCTATTGTGAACCGAAATTATGGTCGCGCGAGACAGATTTTAATCGATAATATGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCCGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGATTACAACCCGCTTTGTTAAGCGGGTTTATTTTTAGGCGTCAGTTTTTCGGGAGTCGATATGGAACATAAAATCGAAGATTTAATCCATATTTTTAAT > 1/1143410‑1143894 | ccAAACACATGTCCGATGAAACCGCACATGTGATCGATGAGGAAGTTCGCGCTATTGTGAACCGAAATTATGGTCGCGCGAGACAGATTTTAATCGATAATATGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTcagcag > 1:202221/1‑251 (MQ=255) cacaTGTCCGATGAAACCGCACATGTGATCGATGAGGAAGTTCGCGCTATTGTGAACCGAAATTATGGTCGCGCGAGACAGATTTTAATCGATAATATGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGaa > 1:735712/1‑251 (MQ=255) cacaTGTCCGATGAAACCGCACATGTGATCGATGAGGAAGTTCGCGCTATTGTGAACCGAAATTATGGTCGCGCGAGACAGATTTTAATCGATAATATGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGaa > 1:753154/1‑251 (MQ=255) aTGTCCGATGAAACCGCACATGTGATCGATGAGGAAGTTCGCGCTATTGTGAACCGAAATTATGGTCGCGCGAGACAGATTTTAATCGATAATATGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGc < 1:388374/251‑1 (MQ=255) caTGTGATCGATGAGGAAGTTCGCGCTATTGTGAACCGAAATTATGGTCGCGCGAGACAGATTTTAATCGATAATATGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGc < 1:164982/251‑1 (MQ=255) gAAGTTCGCGCTATTGTGAACCGAAATTATGGTCGCGCGAGACAGATTTTAATCGATAATATGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAg < 1:839161/249‑1 (MQ=255) aaGTTCGCGCTATTGTGAACCGAAATTATGGTCGCGCGAGACAGATTTTAATCGATAATATGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGc < 1:691323/251‑1 (MQ=255) cgcgCTATTGTGAACCGAAATTATGGTCGCGCGAGACAGATTTTAATCGATAATATGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGa < 1:70323/248‑1 (MQ=255) gcgCTATTGTGAACCGAAATTATGGTCGCGCGAGACAGATTTTAATCGATAATATGGATATTCTACACACGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGaa > 1:143138/3‑251 (MQ=255) aTTGTGAACCGAAATTATGGTCGCGCGAGACAGATTTTAATCGATAATATGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAAcaca > 1:840813/1‑251 (MQ=255) aTTGTGAACCGAAATTATGGTCGCGCGAGACAGATTTTAATCGATAATATGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAAcaca > 1:360997/1‑251 (MQ=255) aaTTATGGTCGCGCGAGACAGATTTTAATCGATAATATGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGa > 1:778972/1‑251 (MQ=255) agaCAGATTTTAATCGATAATATGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGAtt > 1:37041/1‑250 (MQ=255) gaCAGATTTTAATCGATAATATGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGa > 1:764090/1‑217 (MQ=255) tCGATAATATGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAAt < 1:378954/251‑1 (MQ=255) tCGATAATATGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAAt < 1:300740/251‑1 (MQ=255) tCGATAATATGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAAt < 1:66226/251‑1 (MQ=255) tCGATAATATGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAAt < 1:607784/251‑1 (MQ=255) ataataTGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAACCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAg > 1:430701/1‑250 (MQ=255) aataTGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGaa < 1:768074/201‑1 (MQ=255) aataTGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTa > 1:98141/1‑251 (MQ=255) atatGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAAt < 1:93428/175‑1 (MQ=255) tatGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGa < 1:701503/198‑1 (MQ=255) atGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTgg > 1:227590/1‑214 (MQ=255) atGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTaaaa > 1:24676/1‑251 (MQ=255) atGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTaaaa > 1:146273/1‑251 (MQ=255) tGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTg > 1:220501/1‑207 (MQ=255) tGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAAt > 1:729835/1‑242 (MQ=255) atatTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATgcgc > 1:343317/1‑183 (MQ=255) atatTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAggg < 1:679224/187‑1 (MQ=255) atatTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAag < 1:3772/250‑1 (MQ=255) ttCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACaa > 1:840109/1‑197 (MQ=255) ttCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAg > 1:574238/1‑238 (MQ=255) ttCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAgg > 1:338721/1‑250 (MQ=255) ttCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAgg > 1:894809/1‑250 (MQ=255) cgcgATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGa > 1:742347/1‑251 (MQ=255) cgATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAg > 1:70785/1‑250 (MQ=255) cgATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCACAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCT‑AAAAAGAGGCTTTTTGAg > 1:455049/1‑249 (MQ=255) aTGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAGAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTa > 1:396737/1‑251 (MQ=255) aaGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTg > 1:293471/1‑251 (MQ=255) aaGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTg > 1:248722/1‑251 (MQ=255) cgcTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAg < 1:500848/250‑1 (MQ=255) cTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGAc < 1:123714/250‑1 (MQ=255) cTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGAc < 1:641435/250‑1 (MQ=255) ggTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGc > 1:839933/1‑134 (MQ=255) ggTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACttt > 1:125982/1‑251 (MQ=255) ggTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACttt > 1:732939/1‑251 (MQ=255) aCGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGATTAc < 1:749907/251‑1 (MQ=255) aaCTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGATTACAAcc < 1:333011/251‑1 (MQ=255) cTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAatgatg > 1:719134/1‑180 (MQ=255) tATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGATTACAACCCGc < 1:84814/251‑1 (MQ=255) aagaaCAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGATTACAACCCGCTTTGTTa < 1:262257/250‑1 (MQ=255) aCAAATCAAGCAGTTAATGAATCGTCAACCGGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATc > 1:140371/1‑177 (MQ=255) aaaTCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGATTACAACCCGCTTTGTTAAGCGGGt > 1:740713/1‑251 (MQ=255) cAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGATTACAACCCGCTTTGTTAAGCGGGTTTAttt < 1:82097/249‑1 (MQ=255) cAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTGATg > 1:171014/1‑217 (MQ=255) gTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATgcg > 1:85169/1‑115 (MQ=255) gTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTGATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGa > 1:452424/1‑216 (MQ=255) gTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGAc > 1:241037/1‑209 (MQ=255) gTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGATTACAACCCGCTTTGTTAAGCGGGTTTATTTTTAg > 1:242169/1‑251 (MQ=255) gTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAgatg < 1:494243/99‑1 (MQ=255) gTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGATTACAACCCGCTTTGTTAAGCGGGTTTATTTTTAGGCGTCAGtttt > 1:41900/1‑251 (MQ=255) cAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGAc > 1:134077/1‑196 (MQ=255) cacCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGATTACAACCCGCTTTGTTAAGCGGGTTTATTTTTAGGCGTCAGTTTTTCGGGAGTCGat < 1:577643/251‑1 (MQ=255) cacCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGATTACAACCCGCTTTGTTAAGCGGGTTTATTTTTAGGCGTCAGTTTTTCGGGAGTCGat < 1:764498/251‑1 (MQ=255) acCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGATTACAACCCGCTTTGTTAAGCGGGTTTATTTTTAGGCGTCAGTTTTTCGGGAGTCGata < 1:277367/251‑1 (MQ=255) ccTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGATTACAACCCGCTTTGTTAAGCggg > 1:183563/1‑212 (MQ=255) ccTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGATTACAACCCGCTTTGTTAAGCGGGTTTATTTTTAGGCGTCAGTTTTTCGGGAGTCGATATGGa > 1:814936/1‑251 (MQ=255) tCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGATTACAACCCGCTTTGTTAAGCGGGTTTATTTTTAGGCGTCAGTTTTTCGGGAGTCGATATGGAAc < 1:863646/251‑1 (MQ=255) tCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGATTACAACCCGCTTTGTTAAGCGGGTTTATTTTTAGGCGTCAGTTTTTCGGGAGTCGATATGGAAc < 1:120063/251‑1 (MQ=255) gggAAGAACCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGATTACAACCCGCTTTGTTAAGCGGGTTTATTTTTAGGCGTCAGTTTTTCGGGAGTCGATATGGAACACAAAAt > 1:629362/1‑250 (MQ=255) aaCCAAAGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGATTACAACCCGCTTTGTTAAGCGGGTTTATTTTTAGGCGTCAGTTTTTCGGGAGTCGATATGGAACACAAAATCGAAg < 1:565891/249‑1 (MQ=255) aGAATACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGa < 1:333914/76‑1 (MQ=255) aaTACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGATTACAACCCGCTTTGTTAAGCGGGTTTATTTTTAGGCGTCAGTTTTTCGGGAGTCGATATGGAACACAAAATCGAAGATTTAATcc < 1:212889/250‑1 (MQ=255) aaTACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGATTACAACCCGCTTTGTTAAGCGGGTTTATTTTTAGGCGTCAGTTTTTCGGGAGTCGATATGGAACACAAAATCGAAGATTTAATc < 1:725056/249‑1 (MQ=255) aaTACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGATTACAACCCGCTTTGTTAAGCGGGTTTATTTTTAGGCGTCAGTTTTTCGGGAGTCGATATGGAACACAAAATCGAAGATTTAATc < 1:365382/249‑1 (MQ=255) aTACAGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGATTACAACCCGCTTTGTTAAGCGGGTTTATTTTTAGGCGTCAGTTTTTCGGGAGTCGATATGGAACACAAAATCGAAGATTTAATCCat > 1:635380/1‑251 (MQ=255) aGATAAAGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGATTACAACCCGCTTTGTTAAGCGGGTTTATTTTTAGGCGTCAg < 1:576104/201‑1 (MQ=255) aaGCTGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGATTACAACCCGCTTTGTTAAGCGGGTTTATTTTTAGGCGTCAGTTTTTCGGGAGTCGATATGGAACACAAAATCGAAGATTTAATCCATATTTTTAAt > 1:137385/1‑251 (MQ=255) | CCAAACACATGTCCGATGAAACCGCACATGTGATCGATGAGGAAGTTCGTGCTATTGTGAACCGAAATTATGGTCGCGCGAGACAGATTTTAATCGATAATATGGATATTCTACACGCGATGAAAGATGCGCTGGTGAAATACGAAACTATTGAAGAAGAACAAATCAAGCAGTTAATGAATCGTCAACCAGTGACACCGCCTCCAGGTTGGGAAGAACCAAAGAATACAGATAAAGCCGAACCTCAGCAGCCGAAAGCTGAAGAGCCAAAAATGGCAGATGATGCGCAGGGCGTGGAAACACAAAGTGCGGTGGAAAAAAATGATGATTCCAAATCTTTTAATAGCTAAAAAAGAGGCTTTTTGAGCTAGTTGCAAAGACTTTATGATTACAACCCGCTTTGTTAAGCGGGTTTATTTTTAGGCGTCAGTTTTTCGGGAGTCGATATGGAACATAAAATCGAAGATTTAATCCATATTTTTAAT > 1/1143410‑1143894 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |