| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,142,119 | C→T | intergenic (+5070/‑17385) | unknown → / → unknown | LSU rRNA ## 23S rRNA, large subunit ribosomal RNA/tRNA‑Val‑GAC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,142,119 | 0 | C | T | 100.0% | 157.3 / NA | 58 | intergenic (+5070/‑17385) | unknown/unknown | LSU rRNA ## 23S rRNA, large subunit ribosomal RNA/tRNA‑Val‑GAC |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (29/29); total (29/29) | |||||||||||
AAAGTTTTAATACCACTTCCGGCGGAGGGATAACGGATTATACGACATTCATTTCGGATGTTGAAAATAATCAGGTACGTCAGGCTAAATTTGAAGATAATGAAATTTTAGTCACTAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCCTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCACGCATGATGACACAAGAGCAAATCAAAACAACATTTGCCGATGTGGCGGGTTGTGATGAAGCAAAAGAAGAAGTGGGTGAGATCGTTGACTTCTTGCGTGAACCGAAAAAATTCCAAAATTTAG > 1/1141874‑1142350 | aaaGTTTTAATACCACTTCCGGCGGAGGGATAACGGATTATACGACATTCATTTCGGATGTTGAAAATAATCAGGTACGTCAGGCTAAATTTGAAGATAATGAAATTTTAGTCACTAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGAtt < 1:192429/251‑1 (MQ=255) gTTTTAATACCACTTCCGGCGGAGGGATAACGGATTATACGACATTCATTTCGGATGTTGAAAATAATCAGGTACGTCAGGCTAAATTTGAAGATAATGAAATTTTAGTCACTAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTAAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGAttt > 1:427781/1‑249 (MQ=255) ttAATACCACTTCCGGCGGAGGGATAACGGATTATACGACATTCATTTCGGATGTTGAAAATAATCAGGTACGTCAGGCTAAATTTGAAGATAATGAAATTTTAGTCACTAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTgg < 1:417924/251‑1 (MQ=255) cggAGGGATAACGGATTATACGACATTCATTTCGGATGTTGAAAATAATCAGGTACGTCAGGCTAAATTTGAAGATAATGAAATTTTAGTCACTAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGtta < 1:29909/250‑1 (MQ=255) ggATAACGGATTATACGACATTCATTTCGGATGTTGAAAATAATCAGGTACGTCAGGCTAAATTTGAAGATAATGAAATTTTAGTCACTAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAAt < 1:815187/250‑1 (MQ=255) ggATAACGGATTATACGACATTCATTTCGGATGTTGAAAATAATCAGGTACGTCAGGCTAAATTTGAAGATAATGAAATTTTAGTCACTAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAAt < 1:196805/250‑1 (MQ=255) ggATAACGGATTATACGACATTCATTTCGGATGTTGAAAATAATCAGGTACGTCAGGCTAAATTTGAAGATAATGAAATTTTAGTCACTAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAAt < 1:781488/250‑1 (MQ=255) gATAACGGATTATACGACATTCATTTCGGATGTTGAAAATAATCAGGTACGTCAGGCTAAATTTGAAGATAATGAAATTTTAGTCACTAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATc < 1:725575/250‑1 (MQ=255) tAACGGATTATACGACATTCATTTCGGATGTTGAAAATAATCAGGTACGTCAGGCTAAATTTGAAGATAATGAAATTTTAGTCACTAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCTGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCgg > 1:839007/1‑250 (MQ=255) gATTATACGACATTCATTTCGGATGTTGAAAATAATCAGGTACGTCAGGCTAAATTTGAAGATAATGAAATTTTAGTCACTAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTg > 1:711520/1‑251 (MQ=255) gATTATACGACATTCATTTCGGATGTTGAAAATAATCAGGTACGTCAGGCTAAATTTGAAGATAATGAAATTTTAGTCACTAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTg > 1:374602/1‑251 (MQ=255) ttATACGACATTCATTTCGGATGTTGAAAATAATCAGGTACGTCAGGCTAAATTTGAAGATAATGAAATTTTAGTCACTAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTggg > 1:247730/1‑251 (MQ=255) ttATACGACATTCATTTCGGATGTTGAAAATAATCAGGTACGTCAGGCTAAATTTGAAGATAATGAAATTTTAGTCACTAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTggg > 1:304546/1‑251 (MQ=255) ataCGACATTCATTTCGGATGTTGAAAATAATCAGGTACGTCAGGCTAAATTTGAAGATAATGAAATTTTAGTCACTAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGtt > 1:3381/1‑251 (MQ=255) aCATTCATTTCGGATGTTGAAAATAATCAGGTACGTCAGGCTAAATTTGAAGATAATGAAATTTTAGTCACTAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTttctt < 1:781721/251‑1 (MQ=255) tcattTCGGATGTTGAAAATAATCAGGTACGTCAGGCTAAATTTGAAGATAATGAAATTTTAGTCACTAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAAt < 1:648510/229‑1 (MQ=255) cattTCGGATGTTGAAAATAATCAGGTACGTCAGGCTAAATTTGAAGATAATGAAATTTTAGTCACTAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATg > 1:207888/1‑250 (MQ=255) gTTGAAAATAATCAGGTACGTCAGGCTAAATTTGAAGATAATGAAATTTTAGTCACTAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGc > 1:622346/1‑250 (MQ=255) aaaaTAATCAGGTACGTCAGGCTAAATTTGAAGATAATGAAATTTTAGTCACTAAAACCGACGGCACTAAATATACAACAGGTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGc < 1:429886/251‑1 (MQ=255) taatCAGGTACGTCAGGCTAAATTTGAAGATAATGAAATTTTAGTCACTAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGtta > 1:726132/1‑205 (MQ=255) taatCAGGTACGTCAGGCTAAATTTGAAGATAATGAAATTTTAGTCACTAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGtta > 1:389616/1‑205 (MQ=255) taaaGATAATAAAATTTTAGTCACTAAAACGGACGGCACTAAAAATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGGGAAAGGTGAAGGAACGCCGCCGGAAAGAACAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCAGATGCTGTTATTGATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCGAGGCGGTGGCGGCAAGGCGATGAGCTTTGGTa < 1:224804/249‑1 (MQ=255) tGAAGATAATGAAATTTTAGTCACTAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTa < 1:361477/251‑1 (MQ=255) cACTAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGAttt > 1:327927/1‑140 (MQ=255) aCTAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCACGCATGATGac < 1:257530/251‑1 (MQ=255) tAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCACGCATGATGacac < 1:510704/251‑1 (MQ=255) gCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCACGCATGATGACACAAGAGCAAAt > 1:349844/1‑250 (MQ=255) cACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTaa > 1:207370/1‑149 (MQ=255) cACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCACGCATGATGACACAAGAGCAAATc < 1:874702/250‑1 (MQ=255) aaaTATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCACGCATGATGACACAAGAGCAAATCaaaa > 1:7079/1‑250 (MQ=255) atatACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAAt < 1:768176/144‑1 (MQ=255) atatACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAAt > 1:663688/1‑144 (MQ=255) atatACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCAc > 1:408272/1‑221 (MQ=255) atatACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCACGCatgatg > 1:126935/1‑229 (MQ=255) atatACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCACGCATGATGac > 1:221099/1‑231 (MQ=255) ataCAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAAt < 1:648827/142‑1 (MQ=255) ataCAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCACGCATGATGACACAAGAGCAAATCAAAacaaca > 1:794749/1‑251 (MQ=255) caGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAAt > 1:479406/1‑136 (MQ=255) caGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTa > 1:481609/1‑201 (MQ=255) ccATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCACGCATGATGACACAAGAGCAAATCAAAACAACATTTGCCGATGTgg > 1:74502/1‑250 (MQ=255) aCAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCAc > 1:770633/1‑195 (MQ=255) aaGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGc > 1:147090/1‑166 (MQ=255) gATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAg > 1:61075/1‑163 (MQ=255) aTCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCACGCATGATGACACAAGAGCAAATCAAAACAACATTTGCCGATGTGGCGGGTTGTGATGAAg < 1:600261/249‑1 (MQ=255) tGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCACGCATGATGACACAAGAGCAAATCAAAACAACATTTGCCGATGTGGCGGGTTGTGATGAAGCAAaagaagaag < 1:496537/251‑1 (MQ=255) aTTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCACGCATGATGACACAAGAGCAAATCAAAACAACATTTGCCGATGTGGCGGGTTGTGATGAAGCAAAAGAAGAAGt < 1:715525/250‑1 (MQ=255) gttgAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAgg < 1:716103/132‑1 (MQ=255) gttgAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGc > 1:857196/1‑154 (MQ=255) aagaaAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCACGCATGATGACACAAGAGCAAATCAAAACAACATTTGCCGATGTGGCGGGTTGTGATGAAGCAAAAGAAGAAGTGGGTGAGAt < 1:357248/251‑1 (MQ=255) aagaaAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCACGCATGATGACACAAGAGCAAATCAAAACAACATTTGCCGATGTGGCGGGTTGTGATGAAGCAAAAGAAGAAGTGGGTGAGAt < 1:185143/251‑1 (MQ=255) aaGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCACGCATGATGACACAAGAGCAAATCAAAACAACATTTGCCGATGTGGCGGGTTGTGATGAAGCAAAAGAAGAAGTGGGTGAGATc < 1:578423/245‑1 (MQ=255) tGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCACGCATGATGACACAAGAGCAAATCAAAACAACATTTGCCGATGTGGCGGGTTGTGATGAAGCAAAAGAAGAAGTGGGTGAGATCGTTGActt < 1:384545/250‑1 (MQ=255) gTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATGAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCACGCATGATGACACAAGAGCAAATCAAAACAACATTTGCCGATGTGGCGGGTTGTGATGAAGCAAAAGAAGAAGTGGGTGAGATCGTTGAc < 1:436806/243‑1 (MQ=255) ttGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCACGCATGATGACACAAGAGCAAATCAAAACAACATTTGCCGATGTGGCGGGTTGTGATGAAGCAAAAGAAGAAGTGGGTGAGATCGTTGACTTCTTGCg < 1:16503/250‑1 (MQ=255) gccgGAAAGAAGAAGTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCACGCATGATGACACAAGAGCAAATCAAAACAACATTTGCCGATGTGGCGGGGTTTGATGAAGCAAAAAAAGAAAGGGGGGAGATCGTTGACTTCTTGCGTGGAACGaaaaaaa > 1:726746/1‑250 (MQ=255) gaagaagTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCACGCatgatg < 1:318222/140‑1 (MQ=255) aagTTTGTTATCCCAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCACGCATGATGACACAAGAGCAAATCAAAACAACATTTGCCGATGTGGCGGGTTGTGATGAAGCAAAAGAAGAAGTGGGGGAGATCGTTGACTTCTTGCGTGAACCGAAAAAAATCCAAAATTTAg > 1:715371/1‑251 (MQ=255) cAAATCTTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCACGCATGATGACACAAGAGCAAATCAAAACAACATTTGcc < 1:177389/153‑1 (MQ=255) | AAAGTTTTAATACCACTTCCGGCGGAGGGATAACGGATTATACGACATTCATTTCGGATGTTGAAAATAATCAGGTACGTCAGGCTAAATTTGAAGATAATGAAATTTTAGTCACTAAAACCGACGGCACTAAATATACAACAGTTATTCCATTGGAAGACAAAGATCTTTTGAATGATTTGTTGAAGAAAAAAGTGAAAGTTGAAGGCACGCCGCCGGAAAGAAGAAGTTTGTTATCCCAAATCCTGATTTCTTGGTTCCCGATGCTGTTATTAATCGGCGTTTGGGTTTTCTTCATGCGACAAATGCAAGGCGGTGGCGGCAAAGCGATGAGCTTTGGTAAAAGCCGTGCACGCATGATGACACAAGAGCAAATCAAAACAACATTTGCCGATGTGGCGGGTTGTGATGAAGCAAAAGAAGAAGTGGGTGAGATCGTTGACTTCTTGCGTGAACCGAAAAAATTCCAAAATTTAG > 1/1141874‑1142350 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |