| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,139,779 | C→A | intergenic (+2730/‑19725) | unknown → / → unknown | LSU rRNA ## 23S rRNA, large subunit ribosomal RNA/tRNA‑Val‑GAC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,139,779 | 0 | C | A | 100.0% | 153.3 / NA | 55 | intergenic (+2730/‑19725) | unknown/unknown | LSU rRNA ## 23S rRNA, large subunit ribosomal RNA/tRNA‑Val‑GAC |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (28/27); total (28/27) | |||||||||||
ATGGTATTTACCTATGTGGGTAATTTGTTTATGATAGCCTAGCTTCGTGTATATTAATTTAATTGTGTCTAGAGGAGAAAATTTAATGTCCGATGTATTAAAAATATTAACGAATATTCGTAGCTTGCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGATATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGACAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTAATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTTGATGAAAAGGGCGTAACGAAAACTTGGACAGGTCAAGGCAGAACACCGAAAGCAATCCAAGCACAATTAGATAAAGGTAAGTCTTTATC > 1/1139532‑1139999 | aTGGTATTTACCTATGTGGGTAATTTGTTTATGATAGCCTAGCTTCGTGTATATTAATTTAATTGTGTCTAGAGGAGAAAATTTAATGTCCGATGTATTAAAAATATTAACGAATATTCGTAGCTTGCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAg > 1:278018/1‑251 (MQ=255) gTATTTACCTATGTGGGTAATTTGTTTATGATAGCCTAGCTTCGTGTATATTAATTTAATTGTGTCTAGAGGAGAAAATTTAATGTCCGATGTATTAAAAATATTAACGAATATTCGTAGCTTGCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGaa > 1:559548/1‑250 (MQ=255) ttACCTATGTGGGTAATTTGTTTATGATAGCCTAGCTTCGTGTATATTAATTTAATTGTGTCTAGAGGAGAAAATTTAATGTCCGATGTATTAAAAATATTAACGAATATTCGTAGCTTGCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTAt > 1:880271/1‑251 (MQ=255) gtgGGTAATTTGTTTATGATAGCCTAGCTTCGTGTATATTAATTTAATTGTGTCTAGAGGAGAAAATTTAATGTCCGATGTATTAAAAATATTAACGAATATTCGTAGCTTGCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAat > 1:251114/1‑251 (MQ=255) aTTTGTTTATGATAGCCTAGCTTCGTGTATATTAATTTAATTGTGTCTAGAGGAGAAAATTTAATGTCCGATGTATTAAAAATATTAACGAATATTCGTAGCTTGCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGa < 1:458312/251‑1 (MQ=255) aTTTGTTTATGATAGCCTAGCTTCGTGTATATTAATTTAATTGTGTCTAGAGGAGAAAATTTAATGTCCGATGTATTAAAAATATTAACGAATATTCGTAGCTTGCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGa < 1:499051/251‑1 (MQ=255) gtgtATATTAATTTAATTGTGTCTAGAGGAGAAAATTTAATGTCCGATGTATTAAAAATATTAACGAATATTCGTAGCTTGCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGaa > 1:194416/1‑228 (MQ=255) gtgtATATTAATTTAATTGTGTCTAGAGGAGAAAATTTAATGTCCGATGTATTAAAAATATTAACGAATATTAGTAGCTTGCGAATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCa > 1:95386/1‑250 (MQ=255) gtCTAGAGGAGAAAATTTAATGTCCGATGTATTAAAAATATTAACGAATATTCGTAGCTTGCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAgaga > 1:779775/1‑251 (MQ=255) aaaaTTTAATGTCCGATGTATTAAAAATATTAACGAATATTCGTAGCTTGCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGtt < 1:712476/249‑1 (MQ=255) aaTTTAATGTCCGATGTATTAAAAATATTAACGAATATTCGTAGCTTGCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCaagaag > 1:91434/1‑211 (MQ=255) ccGATGTATTAAAAATATTAACGAATATTCGTAGCTTGCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCaagaag < 1:533626/201‑1 (MQ=255) aTTAAAAATATTAACGAATATTCGTAGCTTGCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGa > 1:424277/1‑177 (MQ=255) aTTAAAAATATTAACGAATATTCGTAGCTTGCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGaaaa > 1:898522/1‑251 (MQ=255) atatTCGTAGCTTGCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCACATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCa > 1:381271/1‑251 (MQ=255) atatTCGTAGCTTGCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCa > 1:584667/1‑251 (MQ=255) tatTCGTAGCTTGCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCaagaa > 1:851415/1‑175 (MQ=255) atTCGTAGCTTGCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGa < 1:305204/158‑1 (MQ=255) atTCGTAGCTTGCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCag < 1:849545/199‑1 (MQ=255) atTCGTAGCTTGCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAag > 1:825230/1‑233 (MQ=255) atTCGTAGCTTGCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCaaa < 1:122299/251‑1 (MQ=255) ttCGTAGCTTGCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCaaaa > 1:23556/1‑251 (MQ=255) gCTTGCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACg > 1:563925/1‑183 (MQ=255) gCTTGCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTc > 1:192498/1‑234 (MQ=255) gCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATg > 1:648568/1‑251 (MQ=255) gTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTtgatga > 1:1513/1‑251 (MQ=255) cgcgTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGACGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCTAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAgaga > 1:123706/1‑214 (MQ=255) aTTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTTGATGAAAAGGGCGTa > 1:647923/1‑251 (MQ=255) gCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGaa > 1:172322/1‑159 (MQ=255) gCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTTGATGAAAAg > 1:564640/1‑240 (MQ=255) cATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAg < 1:541802/194‑1 (MQ=255) ttAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTTGATGAAAAGGGCGTAACGaaaa > 1:718659/1‑250 (MQ=255) gCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAAttatta < 1:175535/121‑1 (MQ=255) gCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTCAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTTGATGAAAAg < 1:429968/229‑1 (MQ=255) cTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTTGATGAAAAGGGCGTAACGAAAACTTGGAc < 1:830501/248‑1 (MQ=255) cTTGAAAGTAGTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTTGATGAAAAGGGCGTAACGAAAACTTGGAc < 1:94386/248‑1 (MQ=255) aaaGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGt < 1:865028/161‑1 (MQ=255) tATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTTGATGAAAAGGGCGTAACGAAAACTTGGACAGGTCAAGGcc < 1:868500/251‑2 (MQ=255) tATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTTGATGAAAAGGGCGTAACGAAAACTTGGACAGGTCAAGGc < 1:710179/250‑1 (MQ=255) tATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTTGATGAAAAGGGCGTAACGAAAACTTGGACAGGTCAAGGc < 1:223834/250‑1 (MQ=255) tATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTTGATGAAAAGGGCGTAACGAAAACTTGGACAGGTCAAGGc < 1:528744/250‑1 (MQ=255) cGTTACGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTTGATGAAAAGGGCGTAACGAAAACTTGGACAGGTCAAGGCAGAACACCGAAAGCAATCCAAGcac < 1:206792/251‑1 (MQ=255) aCGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTTGATGAAAAGGGCGTAACGAAAACTTGGACAGGTCAAGGCAGAACACCGAAAGCAATCCAAGCACAAtt < 1:866547/251‑1 (MQ=255) aCGGAAAAGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTTGATGAAAAGGGCGTAACGAAAACTTGGACAGGTCAAGGCAGAACACCGAAAGCAATCCAAGCACAAtt < 1:476179/251‑1 (MQ=255) aaaaGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTTGATGAAAAGGGCGTAACGAAAACTTGGACAGGTCAAGGCAGAACACCGAAAGCAATCCAAGCACAATTAGAt < 1:864991/251‑1 (MQ=255) aaaaGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTTGATGAAAAGGGCGTAACGAAAACTTGGACAGGTCAAGGCAGAACACCGAAAGCAATCCAAGCACAATTAGAt < 1:325581/251‑1 (MQ=255) aaaaGAAAGAAGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTTGATGAAAAGGGCGTAACGAAAACTTGGACAGGTCAAGGCAGAACACCGAAAGCAATCCAAGCACAATTAGAt < 1:112820/251‑1 (MQ=255) aaagaaGAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTTGATGAAAAGGGCGTAACGAAAACTTGGACAGGTCAAGGCAGAACACCGAAAGCAATCCAAGCACAATTAGATAAAgg < 1:250281/251‑1 (MQ=255) aagaagAGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTTGATGAAAAGGGCGTAACGAAAACTTGGACAGGTCAAGGCAGAACACCGAAAGCAATCCAAGCACAATTAGATAAAGGt < 1:526310/251‑1 (MQ=255) gaagaGATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTTGATGAAAAGGGCGTAACGAAAACTTGGACAGGTCAAGGCAGAACACCGAAAGCAATCCAAGCACAATTAGATAAAGGTaa > 1:362263/1‑251 (MQ=255) atTTTAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTTGATGAAAAGGGCGTAACGAAAACTTGGACAGGTCAAGGc > 1:140416/1‑204 (MQ=255) ttttAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTTGATGAAAAGGGCGTAACGAAAACTTGGACAGGTCAAGGc < 1:608902/203‑1 (MQ=255) ttAAAGGCTCAGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTTGATGAAAAGGGCGTAACGAAAACTTGGACAGGTCAAGGCAGAACACCGAAAGCAATCCAAGCACAATTAGATAAAGGTAAGTCTTTAtc < 1:808591/251‑1 (MQ=255) aGCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTGATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTTGATGAAAAGGGCGTAACGAAAACTTGGACAGGTCAAGGc > 1:839475/1‑191 (MQ=255) gCAAGAAGAAAACGAGCGAAAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACg > 1:600029/1‑77 (MQ=255) | ATGGTATTTACCTATGTGGGTAATTTGTTTATGATAGCCTAGCTTCGTGTATATTAATTTAATTGTGTCTAGAGGAGAAAATTTAATGTCCGATGTATTAAAAATATTAACGAATATTCGTAGCTTGCGTATGGTCGCGCGTGATTTAGCATTAGAACAGCTTGAAAGTATTTTGGAAAAATTGCAATTAGTCGTTACGGAAAAGAAAGAAGATATTTTAAAGGCTCAGCAAGAAGAAAACGAGCGACAAGAACGTATTGCCAAATATAAAGAATTATTAAAGCAAGAAGGTATCACTGCAGACGAATTAGCAGAGATTTTAGGTTCTAATGCGGTTCGTAAGAAAAGAGATACTCGTCCTGCAAAATATCAATATGTTGATGAAAAGGGCGTAACGAAAACTTGGACAGGTCAAGGCAGAACACCGAAAGCAATCCAAGCACAATTAGATAAAGGTAAGTCTTTATC > 1/1139532‑1139999 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |