| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,138,697 | G→A | intergenic (+1648/‑20807) | unknown → / → unknown | LSU rRNA ## 23S rRNA, large subunit ribosomal RNA/tRNA‑Val‑GAC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,138,697 | 0 | G | A | 100.0% | 186.2 / NA | 66 | intergenic (+1648/‑20807) | unknown/unknown | LSU rRNA ## 23S rRNA, large subunit ribosomal RNA/tRNA‑Val‑GAC |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (35/31); total (35/31) | |||||||||||
TGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCTTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTGGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATCTGTTTTTGTGACCATTCTGCAAAGGCGCGGTTACTGCCGGACATACTTAAAAGGGCGGTCAAAATTCCGAGTAATAATAAGAAAAG > 1/1138457‑1138942 | tGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGaa < 1:429141/251‑1 (MQ=255) tCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTagag < 1:862202/240‑1 (MQ=255) ccTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTgg > 1:528510/1‑251 (MQ=255) ggACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAAttt > 1:725844/1‑251 (MQ=255) tAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAAt < 1:749266/251‑1 (MQ=255) gCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAg > 1:666533/1‑250 (MQ=255) gaagaaCACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTa > 1:181227/1‑251 (MQ=255) aagaaCACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAat > 1:91953/1‑188 (MQ=255) ccATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATTGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGc > 1:123647/1‑247 (MQ=255) cATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAAc < 1:618542/251‑1 (MQ=255) ttAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACtg < 1:323322/251‑1 (MQ=255) agagAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAAt < 1:370966/202‑1 (MQ=255) aaaaTAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAg < 1:441230/249‑1 (MQ=255) aaaTAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAg > 1:164789/1‑222 (MQ=255) aTAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATCCCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATc < 1:456778/251‑1 (MQ=255) gCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCAc > 1:489013/1‑220 (MQ=255) aGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATa < 1:69527/235‑1 (MQ=255) gTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCt > 1:199632/1‑160 (MQ=255) gTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGa > 1:640022/1‑251 (MQ=255) gTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGa > 1:735558/1‑251 (MQ=255) tCATAGCACTTATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACg > 1:583217/1‑251 (MQ=255) tCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCAc > 1:31345/1‑210 (MQ=255) cACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGAc < 1:666178/250‑1 (MQ=255) aTTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGa < 1:755646/251‑1 (MQ=255) aTAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCgg > 1:267433/1‑250 (MQ=255) tAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAAc < 1:654523/204‑1 (MQ=255) tAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCa > 1:141334/1‑251 (MQ=255) gTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCa > 1:828270/1‑251 (MQ=255) gcctgtgATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGc < 1:378072/174‑1 (MQ=255) ctgtgATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCt < 1:603197/250‑1 (MQ=255) gtgATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGccc > 1:592070/1‑238 (MQ=255) tgATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCttt < 1:854208/250‑1 (MQ=255) tGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATc < 1:297932/251‑1 (MQ=255) ggAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATc < 1:846372/250‑1 (MQ=255) gAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAAt > 1:331134/1‑248 (MQ=255) gCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGaaa > 1:700542/1‑171 (MQ=255) cTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATCTGTTTTtgacca > 1:122335/1‑247 (MQ=255) gCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGc < 1:62265/213‑1 (MQ=255) gACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATCTGTTTTTGTGACCATTCTGCAAAgg > 1:629853/1‑251 (MQ=255) ggTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATc < 1:515239/213‑1 (MQ=255) ggTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATCTGTTTTTGTGACCATTCTGCAAAGGCGCGGt > 1:126930/1‑251 (MQ=255) aTGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAg > 1:456306/1‑150 (MQ=255) tGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATc < 1:232581/215‑1 (MQ=255) tGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATCTGTTTTTGTGACCATTCTGCAAAGGCGCGGTTa > 1:523750/1‑248 (MQ=255) tGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATCTGTTTTTGTGACCATTCTGCAAAGGCGCGGTTa > 1:407423/1‑248 (MQ=255) atGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATCTGTTTTTGTGACCATTCTGCAAAGGCGCGGTTACTGCCGGAc < 1:252489/251‑1 (MQ=255) cgcCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAAttt > 1:321625/1‑184 (MQ=255) aCTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATc > 1:62995/1‑199 (MQ=255) cTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATCTGTTTTTGTGACCATTCTGCAAAGGCGCGGTTACTGCCGGACATACTTAAAAg < 1:303787/251‑1 (MQ=255) aGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCttt > 1:600736/1‑192 (MQ=255) aTACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATCTGTTTTTGTGACCATTCTGCAAAGGCGCGGTTACTGCCGGAc < 1:818398/236‑1 (MQ=255) aTACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATCTGTTTTTGTGACCATTCTGCAAAGGCGCGGTTACTGCCGGACATACTTAAAAggg < 1:705611/249‑1 (MQ=255) cGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGt < 1:360701/138‑1 (MQ=255) tGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTa < 1:354294/99‑1 (MQ=255) tGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATCTGTTTTTGTGACCATTCTGCAAAGGCGCGGTTACTGCCGGACATACTTAAAAGGGCGGTCAAAAtt > 1:81701/1‑251 (MQ=255) tGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATCTGTTTTTGTGACCATTCTGCAAAGGCGCGGTTACTGCCGGACATACTTAAAAGGGCGGTCAAAAtt > 1:118393/1‑251 (MQ=255) gAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCttt < 1:141335/180‑1 (MQ=255) gAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATCTGTTTTTGTGACCATTCTGCAAAGGCGCGGTTACTGCCGGACATACTTAAAAGGGCGGTCAAAAtt > 1:600104/1‑250 (MQ=255) aGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATCTGTTTTTGTGACCATTCTGCAAAGGCGCGGTTACTGCCGGACATACTTAAAAggg < 1:194475/238‑1 (MQ=255) aGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATCTGTTTTTGTGACCATTCTGCAAAGGCGCGGTTACTGCCGGACATACTTAAAAGGGCGGTCAAAATTc > 1:708065/1‑250 (MQ=255) caTCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATCTGTTTTTGTGACCATTCTGCAAAGGCGCGGTTACTGCCGGACATACTTaaaa < 1:780688/227‑1 (MQ=255) tCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATCTGTTTTTGTGACCATTCTGCAAAGGCGCGGTTACTGCCGGACATACtt > 1:878053/1‑221 (MQ=255) tCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATCTGTTTTTGTGACCATTCTGCAAAGGCGCGGTTACTGCCGGACATACTTAAAAGGGCGGTCAAAATTc < 1:469996/240‑1 (MQ=255) gCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAg > 1:258371/1‑111 (MQ=255) gCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATCTGTTTTTGTGACCATTCTGCAAAGGCGCGGTTACTGCCGGACATACt < 1:26580/212‑1 (MQ=255) gCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATCTGTTTTTGTGACCATTCTGCAAAGGCGCGGTTACTGCCGGACATACTTAAAAg < 1:205005/218‑1 (MQ=255) gCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATCTGTTTTTGTGACCATTCTGCAAAGGCGCGGTTACTGCCGGACATACTTAAAAGGGCGGTCAAAATTCCGAGTAATAATaagaaaag > 1:660862/1‑251 (MQ=255) | TGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCTTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTGGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCACGGCGATCTTTAATCTGTTTTTGTGACCATTCTGCAAAGGCGCGGTTACTGCCGGACATACTTAAAAGGGCGGTCAAAATTCCGAGTAATAATAAGAAAAG > 1/1138457‑1138942 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |