| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,138,600 | T→C | intergenic (+1551/‑20904) | unknown → / → unknown | LSU rRNA ## 23S rRNA, large subunit ribosomal RNA/tRNA‑Val‑GAC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,138,600 | 0 | T | C | 100.0% | 173.4 / NA | 61 | intergenic (+1551/‑20904) | unknown/unknown | LSU rRNA ## 23S rRNA, large subunit ribosomal RNA/tRNA‑Val‑GAC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (34/27); total (34/27) | |||||||||||
CATGGCAGAAATTGTTATGATAATAAGGGTGATAATTGGTAATACTAAATTGCGTACATGACCGTTTATGCCTGAAAGCGCTTCTCCTTGCGTATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCTTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTGGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCA > 1/1138358‑1138841 | cATGGCAGAAATTGTTATGATAATAAGGGTGATAATTGGTAATACTAAATTGCGTACATGACCGTTTATGCCTGAAAGCGCTTCTCCTTGCGTATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGAt < 1:792228/249‑1 (MQ=255) aaaTTGTTATGATAATAAGGGTGATAATTGGTAATACTAAATTGCGTACATGACCGTTTATGCCTGAAAGCGCTTCTCCTTGCGTATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTg < 1:710569/251‑1 (MQ=255) ataataAGGGTGATAATTGGTAATACTAAATTGCGTACATGACCGTTTATGCCTGAAAGCGCTTCTCCTTGCGTATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGc > 1:303463/1‑250 (MQ=255) taataaGGGTGATAATTGGTAATACTAAATTGCGTACATGACCGTTTATGCCTGAAAGCGCTTCTCCTTGCGTATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGAt > 1:201101/1‑229 (MQ=255) taataaGGGTGATAATTGGTAATACTAAATTGCGTACATGACCGTTTATGCCTGAAAGCGCTTCTCCTTGCGTATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGAt < 1:522616/229‑1 (MQ=255) taataaGGGTGATAATTGGTAATACTAAATTGCGTACATGACCGTTTATGCCTGAAAGCGCTTCTCCTTGCGTATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCa > 1:67786/1‑251 (MQ=255) taataaGGGTGATAATTGGTAATACTAAATTGCGTACATGACCGTTTATGCCTGAAAGCGCTTCTCCTTGCGTATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCa > 1:50109/1‑251 (MQ=255) taataaGGGTGATAATTGGTAATACTAAATTGCGTACATGACCGTTTATGCCTGAAAGCGCTTCTCCTTGCGTATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCa > 1:308010/1‑251 (MQ=255) taataaGGGTGATAATTGGTAATACTAAATTGCGTACATGACCGTTTATGCCTGAAAGCGCTTCTCCTTGCGTATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCa > 1:813313/1‑251 (MQ=255) ggTAATACTAAATTGCGTACATGACCGTTTATGCCTGAAAGCGCTTCTCCTTGCGTATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTg < 1:76254/222‑1 (MQ=255) ggTAATACTAAATTGCGTACATGACCGTTTATGCCTGAAAGCGCTTCTCCTTGCGTATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGat > 1:653594/1‑251 (MQ=255) tACTAAATTGCGTTCATGACCGTTTATGCCTGAAAGCGCTTCTCCTTGCGTATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATg < 1:84073/251‑1 (MQ=255) tACTAAATTGCGTACATGACCGTTTATGCCTGAAAGCGCTTCTCCTTGCGTATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATg < 1:487495/251‑1 (MQ=255) aCTAAATTGCGTACATGACCGTTTATGCCTGAAAGCGCTTCTCCTTGCGTATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGaa < 1:868621/210‑1 (MQ=255) aCTAAATTGCGTACATGACCGTTTATGCCTGAAAGCGCTTCTCCTTGCGTATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAg < 1:612588/225‑1 (MQ=255) aaaTTGCGTACATGACCGTTTATGCCTGAAAGCGCTTCTCCTTGCGTATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATgcgc > 1:512771/1‑250 (MQ=255) gTACATGACCGTTTATGCCTGAAAGCGCTTCTCCTTGCGTATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGata < 1:217805/236‑1 (MQ=255) gTACATGACCGTTTATGCCTGAAAGCGCTTCTCCTTGCGTATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGat > 1:77836/1‑235 (MQ=255) gTACATGACCGTTTATGCCTGAAAGCGCTTCTCCTTGCGTATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTa > 1:154786/1‑251 (MQ=255) tGACCGTTTATGCCTGAAAGCGCTTCTCCTTGCGTATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATAc < 1:683470/251‑1 (MQ=255) gTTTATGCCTGAAAGCGCTTCTCCTTGCGTATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCa > 1:731108/1‑251 (MQ=255) aaaGCGCTTCTCCTTGCGTATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGca < 1:686997/250‑1 (MQ=255) tcCTTGCGTATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATg > 1:804638/1‑209 (MQ=255) tATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCgcagctttaccaag < 1:728449/250‑14 (MQ=255) tGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGaa < 1:429141/251‑1 (MQ=255) ttCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGaa < 1:89192/151‑1 (MQ=255) tCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTagag < 1:862202/240‑1 (MQ=255) ccTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTgg > 1:528510/1‑251 (MQ=255) ggACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAAttt > 1:725844/1‑251 (MQ=255) tAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAAt < 1:749266/251‑1 (MQ=255) gCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGAc > 1:827779/1‑119 (MQ=255) gCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAg > 1:666533/1‑250 (MQ=255) gaagaaCACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTa > 1:181227/1‑251 (MQ=255) aagaaCACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAat > 1:91953/1‑188 (MQ=255) ccATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATTGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGc > 1:123647/1‑247 (MQ=255) cATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAAc < 1:618542/251‑1 (MQ=255) ttAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACtg < 1:323322/251‑1 (MQ=255) agagAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAAt < 1:370966/202‑1 (MQ=255) gagaAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGt > 1:260194/1‑77 (MQ=255) aaaaTAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAg < 1:441230/249‑1 (MQ=255) aaaTAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAg > 1:164789/1‑222 (MQ=255) aTAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATCCCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATc < 1:456778/251‑1 (MQ=255) tAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGc > 1:848092/1‑135 (MQ=255) tAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGc < 1:348856/145‑1 (MQ=255) gCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCAc > 1:489013/1‑220 (MQ=255) aGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATa < 1:69527/235‑1 (MQ=255) gTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTg > 1:24164/1‑61 (MQ=255) gTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACAt < 1:279181/129‑1 (MQ=255) gTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCt > 1:199632/1‑160 (MQ=255) gTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGa > 1:735558/1‑251 (MQ=255) gTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGa > 1:640022/1‑251 (MQ=255) tCATAGCACTTATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACg > 1:583217/1‑251 (MQ=255) tCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCAc > 1:31345/1‑210 (MQ=255) cACTCATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGAc < 1:666178/250‑1 (MQ=255) cATTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGata > 1:423250/1‑79 (MQ=255) aTTGCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGa < 1:755646/251‑1 (MQ=255) gCCATAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTa > 1:862232/1‑106 (MQ=255) aTAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCgg > 1:267433/1‑250 (MQ=255) tAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAAc < 1:654523/204‑1 (MQ=255) tAAATGCACCGATTGGTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCa > 1:141334/1‑251 (MQ=255) gTGAGTAGCCTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTAGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCa > 1:828270/1‑251 (MQ=255) | CATGGCAGAAATTGTTATGATAATAAGGGTGATAATTGGTAATACTAAATTGCGTACATGACCGTTTATGCCTGAAAGCGCTTCTCCTTGCGTATTTTCTGTTTCCAATGCCAGCCTTTCATGTCTTGCCATGGGACCGATGTCAAAGCTGAAATAGGCTACGAAGAACACCATTAAAATAGAGAAAATAGCGTAATAGTTCATAGCACTCATTGCCATAAATGCACCGATTGGTGAGTAGCTTGTGATGGAATAAGTGGCTAATAAGCCAGCGACTAAGGTAATGATATATGCGCCCCAACTAGATACCGGCATGAGTACGCACATCGGTGCAGCGGTGGAGTCAAGAATATAAGCTAATTTGGCGCGGGAGACTTTGAATTTATCGGTAATCGGGCGGGCAATAGCACCTACGGCTAAACTGTGGAAATAGTCATCGATGAAGGTGACGAAGACTAACGAAGCGGCAACCAATTTTGCCCCA > 1/1138358‑1138841 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |