| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,131,005 | A→G | intergenic (‑71452/‑1098) | unknown ← / → unknown | tRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,131,005 | 0 | A | G | 100.0% | 214.5 / NA | 75 | intergenic (‑71452/‑1098) | unknown/unknown | tRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (37/38); total (37/38) | |||||||||||
CCAAGAACTGTCAATGTTAGGCAAAAAACCTATCGGCGAATGGCTATTTCAGCAAACACCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCTTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAACAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATGTATCCGTTGGATCTTATTGTCATCGCCTGTAATACGGCAAGCACCGTTGTGT > 1/1130770‑1131245 | ccAAGAACTGTCAATGTTAGGCAAAAAACCTATCGGCGAATGGCTATTTCAGCAAACGCCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGGCATTCAAGCAAAACCCACAATTc < 1:665580/251‑1 (MQ=255) cTGTCAATGTTAGGCAAAAAACCTATCGGCGAATGGCTATTTCAGCAAACGCCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCttttttt > 1:42610/1‑251 (MQ=255) gTCAATGTTAGGCAAAAAACCTATCGGCGAATGGCTATTTCAGCAAACGCCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTg > 1:717372/1‑251 (MQ=255) tttCAGCAAACGCCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTCGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGt < 1:425147/251‑1 (MQ=255) ccacAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAgtgt > 1:144550/1‑227 (MQ=255) ccacAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACtttt > 1:659743/1‑251 (MQ=255) ccacAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACtttt > 1:394829/1‑251 (MQ=255) ggTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTAt > 1:575804/1‑251 (MQ=255) gTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAACCATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTAt > 1:839397/1‑250 (MQ=255) gTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGttcgccactttaaattcggtaatt > 1:206958/1‑229 (MQ=255) aaTCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCa > 1:145433/1‑231 (MQ=255) aaTCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCa > 1:599258/1‑249 (MQ=255) aTCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCAt < 1:821243/219‑1 (MQ=255) ccAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTAtt < 1:213618/251‑1 (MQ=255) tGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTTTCACTATTTGTa < 1:513897/251‑1 (MQ=255) gggCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTAt > 1:33411/1‑251 (MQ=255) ggCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTAt < 1:100419/250‑1 (MQ=255) ggCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTAt < 1:328083/250‑1 (MQ=255) gcgcAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATc > 1:733113/1‑208 (MQ=255) gcgcAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTg > 1:192594/1‑251 (MQ=255) gcgcAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTg > 1:888499/1‑251 (MQ=255) cAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCtt < 1:297427/251‑1 (MQ=255) gCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATc > 1:640029/1‑192 (MQ=255) gATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAgtg > 1:64270/1‑183 (MQ=255) gATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTAt < 1:778971/230‑1 (MQ=255) gATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACttt > 1:665764/1‑251 (MQ=255) gATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACttt > 1:39071/1‑251 (MQ=255) gATTATATGCCCATCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTa > 1:484360/1‑229 (MQ=255) ttATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCAc > 1:741355/1‑219 (MQ=255) ttATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTAt < 1:799494/228‑1 (MQ=255) ttATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGc < 1:766352/242‑1 (MQ=255) ttATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTc > 1:808881/1‑250 (MQ=255) ttATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTc > 1:192761/1‑250 (MQ=255) cccGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTcc < 1:370033/251‑1 (MQ=255) gtcgtTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTAt < 1:127011/218‑1 (MQ=255) cgtTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTa > 1:877529/1‑215 (MQ=255) aaaCATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCAc < 1:638516/187‑1 (MQ=255) aTACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAacg > 1:640790/1‑251 (MQ=255) tACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCAt > 1:444307/1‑152 (MQ=255) aTGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCAc > 1:891200/1‑177 (MQ=255) aTGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGc < 1:489631/189‑1 (MQ=255) aTGTAAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAAccc < 1:625848/99‑1 (MQ=255) gTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTaa > 1:611071/1‑251 (MQ=255) tCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACtt > 1:237582/1‑187 (MQ=255) tCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATa > 1:419740/1‑251 (MQ=255) cTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGa < 1:648251/251‑1 (MQ=255) aCCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATg < 1:238542/251‑1 (MQ=255) aCCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATg < 1:687046/251‑1 (MQ=255) ccttATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCtt < 1:12937/177‑1 (MQ=255) cttATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATGTATcc < 1:594735/250‑1 (MQ=255) aaGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATGTATCCGTTgg < 1:655608/251‑1 (MQ=255) gCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCg > 1:554470/1‑177 (MQ=255) cGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATGTATCCGTTGGAt > 1:730638/1‑250 (MQ=255) gAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAg < 1:141608/229‑1 (MQ=255) aaaTGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATGTATCCGTTGGATCTTATTg < 1:751023/251‑1 (MQ=255) gACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATGTATCCGTTGGATCTTATTGTCAt > 1:185899/1‑251 (MQ=255) tttttCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATGTATCCGTTGGATCTTATTGTCATCGCCTGTa > 1:677729/1‑251 (MQ=255) tttttCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATGTATCCGTTGGATCTTATTGTCATCGCCTGTa > 1:279800/1‑251 (MQ=255) ttttCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATGTATCCGTTGGATCTTATTGTCATCGCCTGTaa < 1:712687/251‑1 (MQ=255) ttCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATGTATCCGTTGGATCTTATTGTCATCGCCTGTAATa < 1:842242/251‑1 (MQ=255) ttCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATGTATCCGTTGGATCTTATTGTCATCGCCTGTAATa < 1:759227/251‑1 (MQ=255) tCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATGTATCCGTTGGATCTTATTGTCATCGCCTGTAATAc < 1:95803/251‑1 (MQ=255) cATCAATCTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATGTATCCGTTGGATCTTATTGTCATCGCCTGTAATACgg < 1:294661/251‑1 (MQ=255) cATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATGTATCCGTTGGATCTTATTGTCATCGCCTGTAATACgg < 1:56239/251‑1 (MQ=255) aTCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATGTATCCGTTGGATCTTATTGTCATCGCCTGTAATACgg > 1:235011/1‑250 (MQ=255) aaaCTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATGTATcc < 1:94463/215‑1 (MQ=255) aCTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCtt < 1:434553/140‑1 (MQ=255) cTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATGTATCCGTTGGATCTTATTGTCATCGCCTGTAATACGGCAAGCAc < 1:865985/251‑1 (MQ=255) gATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGaa < 1:464854/169‑1 (MQ=255) gATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATGTATCCGTTGGATCTTATTGTCATCGCCTGTAATACgg < 1:681398/242‑1 (MQ=255) aTTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATc > 1:20193/1‑199 (MQ=255) aTTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATg < 1:587159/204‑1 (MQ=255) tATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATGTATCCGTTGGATCTTATTGTCATCGCCTGTAATACGGCAAGCACCGTtg > 1:752723/1‑251 (MQ=255) aTGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATa < 1:712900/118‑1 (MQ=255) gACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATGTATCCGTTGGATCTTATTGTCATCGCCTGTAATACGGCAAGCACCGTTgtgt < 1:566333/250‑1 (MQ=255) | CCAAGAACTGTCAATGTTAGGCAAAAAACCTATCGGCGAATGGCTATTTCAGCAAACACCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCTTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAACAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATGTATCCGTTGGATCTTATTGTCATCGCCTGTAATACGGCAAGCACCGTTGTGT > 1/1130770‑1131245 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |