Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,130,948 T→C intergenic (‑71395/‑1155) unknown ← / → unknown tRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,130,9480TC100.0% 192.2 / NA 68intergenic (‑71395/‑1155)unknown/unknowntRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (38/30);  total (38/30)

CTTGGTGACGGCAAACCTTGGATCGAGGCTCGAACGCTCATTCCCCAGACGCTATTTGTCTATCACCAAGAACTGTCAATGTTAGGCAAAAAACCTATCGGCGAATGGCTATTTCAGCAAACACCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCTTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAACAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATG  >  1/1130705‑1131193
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                     
cTTGGTGACGGCAAACCTTGGATCGAGGCTCGAACGCTCATTCCCCAGACGCTATTTGTCTATCACCAAGAACTGTCAATGTTAGGCAAAAAACCTATCGGCGAATGGCTATTTCAGCAAACGCCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAg                                                                                                                                                                                                                                                <  1:846635/251‑1 (MQ=255)
cTTGGTGACGGCAAACCTTGGATCGAGGCTCGAACGCTCATTCCCCAGACGCTATTTGTCTATCACCAAGAACTGTCAATGTTAGGCAAAAAACCTATCGGCGAATGGCTATTTCAGCAAACGCCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAg                                                                                                                                                                                                                                                <  1:684280/251‑1 (MQ=255)
              aCCTTGGATCGAGGCTCGAACGCTCATTCCCCAGACGCTATTTGTCTATCACCAAGAACTGTCAATGTTAGGCAAAAAACCTATCGGCGAATGGCTATTTCAGCAAACGCCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACg                                                                                                                                                                                                                                  >  1:217461/1‑251 (MQ=255)
               ccTTGGATCGAGGCTCGAACGCTCATTCCCCAGACGCTATTTGTCTATCACCAAGAACTGTCAATGTTAGGCAAAAAACCTATCGGCGAATGGCTATTTCAGCAAACGCCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACg                                                                                                                                                                                                                                  >  1:574927/1‑250 (MQ=255)
                         aGGCTCGAACGCTCATTCCCCAGACGCTATTTGTCTATCACCAAGAACTGTCAATGTTAGGCAAAAAACCTATCGGCGAATGGCTATTTCAGCAAACGCCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTc                                                                                                                                                                                                                        >  1:843796/1‑250 (MQ=255)
                                   gCTCATTCCCCAGACGCTATTTGTCTATCACCAAGAACTGTCAATGTTAGGCAAAAAACCTATCGGCGAATGGCTATTTCAGCAAACGCCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGa                                                                                                                                                                                                             >  1:840179/1‑251 (MQ=255)
                                           cccAGACGCTATTTGTCTATCACCAAGAACTGTCAATGTTAGGCAAAAAACCTATCGGCGAATGGCTATTTCAGCAAACGCCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGAc                                                                                                                                                                                                     <  1:516228/251‑1 (MQ=255)
                                                 cGCTATTTGTCTATCACCAAGAACTGTCAATGTTAGGCAAAAAACCTATCGGCGAATGGCTATTTCAGCAAACGCCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAg                                                                                                                                                                                                                                                <  1:308785/202‑1 (MQ=255)
                                                   cTATTTGTCTATCACCAAGAACTGTCAATGTTAGGCAAAAAACCTATCGGCGAATGGCTATTTCAGCAAACGCCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAg                                                                                                                                                                                                                                                <  1:808033/200‑1 (MQ=255)
                                                   cTATTTGTCTATCACCAAGAACTGTCAATGTTAGGCAAAAAACCTATCGGCGAATGGCTATTTCAGCAAACGCCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTcaag                                                                                                                                                                                              >  1:638268/1‑249 (MQ=255)
                                                         gTCTATCACCAAGAACTGTCAATGTTAGGCAAAAAACCTATCGGCGAATGGCTATTTCAGCAAACGCCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTcaagc                                                                                                                                                                                             <  1:186476/245‑3 (MQ=255)
                                                                 ccAAGAACTGTCAATGTTAGGCAAAAAACCTATCGGCGAATGGCTATTTCAGCAAACGCCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGGCATTCAAGCAAAACCCACAATTc                                                                                                                                                                               <  1:665580/251‑1 (MQ=255)
                                                                        cTGTCAATGTTAGGCAAAAAACCTATCGGCGAATGGCTATTTCAGCAAACGCCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAg                                                                                                                                                                                                                                                >  1:888284/1‑179 (MQ=255)
                                                                        cTGTCAATGTTAGGCAAAAAACCTATCGGCGAATGGCTATTTCAGCAAACGCCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCttttttt                                                                                                                                                                        >  1:42610/1‑251 (MQ=255)
                                                                        cTGTCAATGTTAGGCAAAAAACCTATCGGCGAATGGCTATTTCAGCAAACGCCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCACCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGAc                                                                                                                                                                                                     >  1:426683/1‑222 (MQ=255)
                                                                          gTCAATGTTAGGCAAAAAACCTATCGGCGAATGGCTATTTCAGCAAACGCCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTg                                                                                                                                                                      >  1:717372/1‑251 (MQ=255)
                                                                                                          ggCTATTTCAGCAAACGCCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAg                                                                                                                                                                                                                                                <  1:134162/145‑1 (MQ=255)
                                                                                                          ggCTATTTCAGCAAACGCCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAg                                                                                                                                                                                                                                                <  1:712834/145‑1 (MQ=255)
                                                                                                               tttCAGCAAACGCCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTCGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGt                                                                                                                                 <  1:425147/251‑1 (MQ=255)
                                                                                                                           ccacAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAgtgt                                                                                                                                             >  1:144550/1‑227 (MQ=255)
                                                                                                                           ccacAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACtttt                                                                                                                     >  1:659743/1‑251 (MQ=255)
                                                                                                                           ccacAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACtttt                                                                                                                     >  1:394829/1‑251 (MQ=255)
                                                                                                                                    cGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAAc                                                                                                                                                                                                                >  1:7379/1‑151 (MQ=255)
                                                                                                                                     ggTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTAt                                                                                                           >  1:575804/1‑251 (MQ=255)
                                                                                                                                      gTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAACCATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTAt                                                                                                           >  1:839397/1‑250 (MQ=255)
                                                                                                                                      gTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGttcgccactttaaattcggtaatt                                                                                                          >  1:206958/1‑229 (MQ=255)
                                                                                                                                         aaTCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTtat                                                                                                                                                                                                                                                   <  1:893899/111‑1 (MQ=255)
                                                                                                                                         aaTCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCa                                                                                                                           >  1:145433/1‑231 (MQ=255)
                                                                                                                                         aaTCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCa                                                                                                         >  1:599258/1‑249 (MQ=255)
                                                                                                                                          aTCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCAt                                                                                                                                      <  1:821243/219‑1 (MQ=255)
                                                                                                                                            ccAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTAtt                                                                                                    <  1:213618/251‑1 (MQ=255)
                                                                                                                                                tGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTTTCACTATTTGTa                                                                                                <  1:513897/251‑1 (MQ=255)
                                                                                                                                                 gggCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTAt                                                                                               >  1:33411/1‑251 (MQ=255)
                                                                                                                                                  ggCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTAt                                                                                               <  1:100419/250‑1 (MQ=255)
                                                                                                                                                  ggCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTAt                                                                                               <  1:328083/250‑1 (MQ=255)
                                                                                                                                                   gcgcAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATc                                                                                                                                        >  1:733113/1‑208 (MQ=255)
                                                                                                                                                   gcgcAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTg                                                                                             >  1:888499/1‑251 (MQ=255)
                                                                                                                                                   gcgcAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTg                                                                                             >  1:192594/1‑251 (MQ=255)
                                                                                                                                                      cAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCtt                                                                                          <  1:297427/251‑1 (MQ=255)
                                                                                                                                                           tCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGAc                                                                                                                                                                                                     >  1:492681/1‑139 (MQ=255)
                                                                                                                                                                   gCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGAc                                                                                                                                                                                                     <  1:897811/131‑1 (MQ=255)
                                                                                                                                                                   gCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATc                                                                                                                                        >  1:640029/1‑192 (MQ=255)
                                                                                                                                                                      gATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAgtg                                                                                                                                              >  1:64270/1‑183 (MQ=255)
                                                                                                                                                                      gATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTAt                                                                                               <  1:778971/230‑1 (MQ=255)
                                                                                                                                                                      gATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACttt                                                                          >  1:39071/1‑251 (MQ=255)
                                                                                                                                                                      gATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACttt                                                                          >  1:665764/1‑251 (MQ=255)
                                                                                                                                                                      gATTATATGCCCATCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTa                                                                                                >  1:484360/1‑229 (MQ=255)
                                                                                                                                                                        ttATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCAc                                                                                                        >  1:741355/1‑219 (MQ=255)
                                                                                                                                                                        ttATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTAt                                                                                               <  1:799494/228‑1 (MQ=255)
                                                                                                                                                                        ttATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGc                                                                                 <  1:766352/242‑1 (MQ=255)
                                                                                                                                                                        ttATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTc                                                                         >  1:192761/1‑250 (MQ=255)
                                                                                                                                                                        ttATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTc                                                                         >  1:808881/1‑250 (MQ=255)
                                                                                                                                                                          atatGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTg                                                                                                                                                                                                              <  1:173726/115‑1 (MQ=255)
                                                                                                                                                                               cccGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTcc                                                                 <  1:370033/251‑1 (MQ=255)
                                                                                                                                                                                  gtcgtTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTAt                                                                                               <  1:127011/218‑1 (MQ=255)
                                                                                                                                                                                    cgtTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTa                                                                                                >  1:877529/1‑215 (MQ=255)
                                                                                                                                                                                                        aaaCATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCAc                                                                                                        <  1:638516/187‑1 (MQ=255)
                                                                                                                                                                                                            aTACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAacg                                    >  1:640790/1‑251 (MQ=255)
                                                                                                                                                                                                             tACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCAt                                                                                                                                      >  1:444307/1‑152 (MQ=255)
                                                                                                                                                                                                                  aTGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCAc                                                                                                        >  1:891200/1‑177 (MQ=255)
                                                                                                                                                                                                                  aTGTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGc                                                                                            <  1:489631/189‑1 (MQ=255)
                                                                                                                                                                                                                  aTGTAAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAAccc                                                                                                                                                                                      <  1:625848/99‑1 (MQ=255)
                                                                                                                                                                                                                    gTTAATCAGCGAGCTTTTCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTaa                            >  1:611071/1‑251 (MQ=255)
                                                                                                                                                                                                                                     tCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACtt                                                                           >  1:237582/1‑187 (MQ=255)
                                                                                                                                                                                                                                     tCCTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATa           >  1:419740/1‑251 (MQ=255)
                                                                                                                                                                                                                                       cTTGAGAACCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGa         <  1:648251/251‑1 (MQ=255)
                                                                                                                                                                                                                                              aCCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATg  <  1:687046/251‑1 (MQ=255)
                                                                                                                                                                                                                                              aCCGCCTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAGCAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATg  <  1:238542/251‑1 (MQ=255)
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                     
CTTGGTGACGGCAAACCTTGGATCGAGGCTCGAACGCTCATTCCCCAGACGCTATTTGTCTATCACCAAGAACTGTCAATGTTAGGCAAAAAACCTATCGGCGAATGGCTATTTCAGCAAACACCACAAAGGCGGTTAATCCAATGGGCGCAAGATCCTCAAAGCGGATTATATGCCCGTCGTTCCTTGTTTTGGGTCCAAAACATACCGATGTTAATCAGCGAGCTTTTCCTTGAGAACCGCTTTATAAGCGAATAAAATGACGCAAATTTTTCCATCAAACTGATTATGGACATTCAAACAAAACCCACAATTCTTTTTTTTGATTCCGGCGTCGGCGGCTTTAGTGTTTATCATGAGGTTAAGCAACTTTTGCCTGACTATCACTATTTGTATTGCTTTGATAACGCTTACTTTCCTTATTCCGAGAAGCCTGAAGAAAAGATCATCGAACGTACGTTAAAAATCTGCCAACGCATAGATCAAATG  >  1/1130705‑1131193

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑