| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,129,460 | A→G | intergenic (‑69907/‑2643) | unknown ← / → unknown | tRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,129,460 | 0 | A | G | 98.7% | 220.1 / NA | 78 | intergenic (‑69907/‑2643) | unknown/unknown | tRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (34/43); total (34/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATATTGAACGGGATGTGGCGCAACCTTACCCGATGATGCGTCTGGTGCAGGGGGATGTCGGCTCCGGTAAAACCTTAGTGGCGGCGTTAGCGGCACTGCTCGCCATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGACAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCATGCTGCGGGAAAAAGGTAATCAGGCAGGCGTGTATCCTCATCAGTTAATCATGACCGCCACACCGATTCCACGTACGCTTGCCATGAC > 1/1129226‑1129703 | atatTGAACGGGATGTGGCGCAACCTTACCCGATGATGCGTCTGGTGCAGGGGGATGTCGGCTCCGGTAAAACCTTAGTGGCGGCGTTAGCGGCACTGCTCGCCATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGc > 1:148507/1‑250 (MQ=255)atatTGAACGGGATGTGGCGCAACCTTACCCGATGATGCGTCTGGTGCAGGGGGATGTCGGCTCCGGTAAAACCTTAGTGGCGGCGTTAGCGGCACTGCTCGCCATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGc > 1:77196/1‑250 (MQ=255) atTGAACGGGATGTGGCGCAACCTTACCCGATGATGCGTCTGGTGCAGGGGGATGTCGGCTCCGGTAAAACCTTAGTGGCGGCGTTAGCGGCACTGCTCGCCATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCgg > 1:366837/1‑250 (MQ=255) ggATGTGGCGCAACCTTACCCGATGATGCGTCTGGTGCAGGGGGATGTCGGCTCCGGTAAAACCTTAGTGGCGGCGTTAGCGGCACTGCTCGCCATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAgaga > 1:583699/1‑251 (MQ=255) aCCTTACCCGATGATGCGTCTGGTGCAGGGGGATGTCGGCTCCGGTAAAACCTTAGTGGCGGCGTTAGCGGCACTGCTCGCCATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCg < 1:763328/230‑1 (MQ=255) aCCTTACCCGATGATGCGTCTGGTGCAGGGGGATGTCGGCTCCGGTAAAACCTTAGTGGCGGCGTTAGCGGCACTGCTCGCCATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAgaga < 1:790370/239‑1 (MQ=255) atgatgCGTCTGGTGCAGGGGGATGTCGGCTCCGGTAAAACCTTAGTGGCGGCGTTAGCGGCACTGCTCGCCATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTAc < 1:583835/250‑1 (MQ=255) atgatgCGTCTGGTGCAGGGGGATGTCGGCTCCGGTAAAACCTTAGTGGCGGCGTTAGCGGCACTGCTCGCCATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTAc < 1:562099/250‑1 (MQ=255) tgatgCGTCTGGTGCAGGGGGATGTCGGCTCCGGTAAAGCCTTAGTGGCGGCGTTAGCGGCACTGCTCGCCATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACaa < 1:161973/251‑1 (MQ=255) gatgCGTCTGGTGCAGGGGGATGTCGGCTCCGGTAAAACCTTAGTGGCGGCGTTAGCGGCACTGCTCGCCATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACaaa > 1:271886/1‑251 (MQ=255) tgCGTCTGGTGCAGGGGGATGTCGGCTCCGGTAAAACCTTAGTGGCGGCATTAGCGGCACTGCTCGCCATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAAtg > 1:189907/1‑251 (MQ=255) cGTCTGGTGCAGGGGGATGTCGGCTCCGGTAAAACCTTAGTGGCGGCGTTAGCGGCACTGCTCGCCATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAAtgg < 1:391914/250‑1 (MQ=255) cGTCTGGTGCAGGGGGATGTCGGCTCCGGTAAAACCTTAGTGGCGGCGTTAGCGGCACTGCTCGCCATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAAtgg < 1:700574/250‑1 (MQ=255) gTCTGGTGCAGGGGGATGTCGGCTCCGGTAAAACCTTAGTGGCGGCGTTAGCGGCACTGCTCGCCATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGGACAAAtggtg > 1:254155/1‑251 (MQ=255) tGCAGGGGGATGTCGGCTCCGGTAAAACCTTAGTGGCGGCGTTAGCGGCACTGCTCGCCATTGATAACGGTAAACAGGTGGTATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGa < 1:432831/251‑1 (MQ=255) cAGGGGGATGTCGGCTCCGGTAAAACCTTAGTGGCGGCGTTAGCGGCACTGCTCGCCATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGaa < 1:48458/250‑1 (MQ=255) gggggATGTCGGCTCCGGTAAAACCTTAGTGGCGGCGTTAGCGGCACTGCTCGCCATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACaa > 1:125521/1‑235 (MQ=255) ggggATGTCGGCTCCGGTAAAACCTTAGTGGCGGCGTTAGCGGCACTGCTCGCCATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACaac < 1:801585/235‑2 (MQ=255) tGTCGGCTCCGGTAAAACCTTAGTGGCGGCGTTAGCGGCACTGCTCGCCATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGt < 1:592031/251‑1 (MQ=255) gCTCCGGTAAAACCTTAGTGGCGGCGTTAGCGGCACTGCTCGCCATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTAtt > 1:738645/1‑250 (MQ=255) ggTAAAACCTTAGTGGCGGCGTTAGCGGCACTGCTCGCCATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGa > 1:765686/1‑251 (MQ=255) cGGCACTGCTCGCCATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAg > 1:293822/1‑250 (MQ=255) gCACTGCTCGCCATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCt < 1:582439/250‑1 (MQ=255) gCACTGCTCGCCATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCt < 1:39375/250‑1 (MQ=255) ccATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACggg < 1:526185/144‑1 (MQ=255) aTTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAAtggtgg < 1:821683/187‑1 (MQ=255) aTTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGAttg > 1:642587/1‑247 (MQ=255) tGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACg > 1:203698/1‑251 (MQ=255) aCGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAAtgg > 1:838575/1‑177 (MQ=255) tAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCAc < 1:830028/250‑1 (MQ=255) tAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCAc < 1:711513/250‑1 (MQ=255) aaaCAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTcc > 1:251638/1‑196 (MQ=255) aaaCAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAAc > 1:695147/1‑244 (MQ=255) cgtaagtgcggtagaattttaCGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTc < 1:657668/231‑1 (MQ=255) ggTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGtt > 1:234839/1‑215 (MQ=255) ggTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTg < 1:505052/226‑1 (MQ=255) ggCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAAt < 1:756161/203‑1 (MQ=255) ggCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCCGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGa < 1:123189/192‑1 (MQ=255) gCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGCGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCg < 1:670523/250‑1 (MQ=255) cgcCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGa < 1:666353/251‑1 (MQ=255) cgcCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGa < 1:517311/251‑1 (MQ=255) gACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCg > 1:134717/1‑236 (MQ=255) aCGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCAt > 1:795299/1‑251 (MQ=255) aCGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCAt > 1:413452/1‑251 (MQ=255) aCGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCAt > 1:880440/1‑251 (MQ=255) gAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCAtgc < 1:762186/250‑1 (MQ=255) gAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCAtgc < 1:900907/250‑1 (MQ=255) aaaTCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCAtgctg < 1:574917/251‑1 (MQ=255) aTCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGGAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCATGCTGCg > 1:411969/1‑251 (MQ=255) tCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTcc > 1:436847/1‑165 (MQ=255) cGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCATGCTGCGGGaaaa < 1:43929/250‑1 (MQ=255) gAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGAttgt > 1:828482/1‑197 (MQ=255) gAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCATGCTGCGGGAAAAAgg > 1:342815/1‑251 (MQ=255) gAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCATGCTGCGGGAAAAAgg > 1:531004/1‑251 (MQ=255) gAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCATGCTGCGGGAAAAAgg > 1:96066/1‑251 (MQ=255) gAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCATGCTGCGGGAAAAAgg > 1:873725/1‑251 (MQ=255) gAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCATGCTGCGGGAAAAAgg > 1:473411/1‑251 (MQ=255) gCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCATGCTGCGGGAAAAAGGTAAt > 1:327397/1‑250 (MQ=255) ccGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCATGCTGCGGGAAAAAGGTAATcaggca > 1:772041/1‑251 (MQ=255) ccGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCATGCTGCGGGAAAAAGGTAATcaggca < 1:684413/251‑1 (MQ=255) ccGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCATGCTGCGGGAAAAAGGTAATcaggca > 1:653279/1‑251 (MQ=255) cgccgTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCATGCTGCGGGAAAAAGGTAATCAGGCAGGCGTGTATcc < 1:97913/251‑1 (MQ=255) ccgTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGc < 1:581024/163‑1 (MQ=255) ttGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCATGCTGCGGGAAAAAGGTAATCAGGCAGGCGTGTATCCtcatc < 1:351667/251‑1 (MQ=255) ggTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAac < 1:251961/115‑1 (MQ=255) ggTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCAc < 1:718279/182‑1 (MQ=255) ggTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAAc < 1:560512/201‑1 (MQ=255) ggTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCATGCTGCGGGAAAAAGGTAATCAGGCAGGCGTGTATCCtcatc < 1:113746/249‑1 (MQ=255) ttGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCATGCTGCGGGAAAAAGGTAATCAGGCAGGCGTGTATCCTCATCAGTTa < 1:636419/251‑1 (MQ=255) cGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCATGCTGCGGGAAAAAGGTAATCAGGCAGGCGTGTATCCTCATCAGTTAATCATg < 1:560901/251‑1 (MQ=255) ttGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCATGCTGCGGGAAAAAGGTAATCAGGCAGGCGTGTATCCTCATCAGTTAATCATGAcc < 1:239742/251‑1 (MQ=255) gCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCATGCTGCGGGAAAAAGGTAATCAGGCAGGCGTGTATCCTCATCAGTTAATCATGACCGc > 1:678743/1‑250 (MQ=255) cAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCgg > 1:253019/1‑170 (MQ=255) ggctggcAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCAtgc < 1:725469/180‑1 (MQ=255) gcAGAAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTAAAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGATTTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCCCCGTTTCGGCGTGCACCAACGACTCAGGCTGCGGGAAAAAGGTAATCAGGCAGGCGTGTATCCTCATCAGTTAATCATGACCGCCACACCGATTCCACGTACGc < 1:872762/250‑1 (MQ=255) cAGGAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGACCGCACGCTTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCCCCAACGACTCATGCTGCGGGAAAAAGGTAATCAGGCAGGCGTGTATCCTCATCAGTTAATCATGACCGCCACACCGATTCCACGTACGCt < 1:140131/250‑1 (MQ=255) gAAAAGTCAAAGGCAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCATGCTGCGGGAAAAAGGTAATCAGGCAGGCGTGTAt < 1:862695/203‑1 (MQ=255) tCAAAGACAAACAAGGGGTTGCCGAGCTAGAAAAAAAAAAAGGCGGTGGGGTACAAATGGGGGTGGGAACGCACGCTTTATTCCAGGAAGAGGTGAAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTGCGGCGTGCCCCAACGACTCATGCTGCGGAAAAAAGGTAATAAGGCGGGCGTGTATCCTCATCAGTTAATCATGACCGCCACACCGATTCCACGTACGCTTGCCATGAc < 1:232035/250‑1 (MQ=255) | ATATTGAACGGGATGTGGCGCAACCTTACCCGATGATGCGTCTGGTGCAGGGGGATGTCGGCTCCGGTAAAACCTTAGTGGCGGCGTTAGCGGCACTGCTCGCCATTGATAACGGTAAACAGGTGGCATTGATGGCGCCGACGGAAATCTTAGCGGAACAGCACGCCGTGAACTTCCGCCGTTGGTTTGAACCGCTTGGCATTCAAGTGGGCTGGCTGGCAGGAAAAGTCAAAGACAAACAACGGGTTGCCGAGCTAGAGAAAATAAAAAGCGGTGCGGTACAAATGGTGGTGGGAACGCACGCGTTATTCCAGGAAGAGGTGGAATTTCATCGTTTGAGCTTGGTGATTGTTGACGAACAGCACCGTTTCGGCGTGCACCAACGACTCATGCTGCGGGAAAAAGGTAATCAGGCAGGCGTGTATCCTCATCAGTTAATCATGACCGCCACACCGATTCCACGTACGCTTGCCATGAC > 1/1129226‑1129703 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |