| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,126,975 | G→A | intergenic (‑67422/‑5128) | unknown ← / → unknown | tRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,126,975 | 0 | G | A | 100.0% | 207.4 / NA | 74 | intergenic (‑67422/‑5128) | unknown/unknown | tRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (28/46); total (28/46) | |||||||||||
CCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTTGGGGATTGAGCACATCAAAAACGAACTGGAAAATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTGAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCGTGTGCTTGGACAAATGCACAGCCTTTATAAACCGCGCCCGGGTCGGGTAAAAGATTATATTGCCGTGCCGAAAGCCAATGGCTATCAGTCCTTACATACGTCGATGATTGGTCCGCAC > 1/1126731‑1127208 | ccGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTTGGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAg > 1:559403/1‑250 (MQ=255) tcgtATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTTGGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCAtt > 1:371695/1‑251 (MQ=255) aTCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTTGGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTa < 1:524674/251‑1 (MQ=255) ccAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTTGGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGc < 1:732024/250‑1 (MQ=255) ccAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTTGGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGc < 1:224220/250‑1 (MQ=255) tttATGCACCGTTGGCGCATCGCTTGGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAGGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATgcg > 1:451715/1‑250 (MQ=255) cgccGTTGGCGCATCGCTTGGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTaaa < 1:901830/248‑1 (MQ=255) ccGTTGGCGCATCGCTTGGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGa > 1:409065/1‑251 (MQ=255) gTTGGCGCATCGCTTGGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGAt > 1:416900/1‑250 (MQ=255) gCTTGGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCAt > 1:322139/1‑251 (MQ=255) cTTGGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCaaaa > 1:222740/1‑222 (MQ=255) cTTGGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCAtt > 1:306005/1‑251 (MQ=255) cTTGGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCAtt > 1:48880/1‑251 (MQ=255) cTTGGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCAt < 1:251912/250‑1 (MQ=255) ttGGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTc < 1:357349/251‑1 (MQ=255) ttGGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTc < 1:674996/251‑1 (MQ=255) tGGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTcc < 1:257088/251‑1 (MQ=255) ggATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCAt < 1:706129/250‑1 (MQ=255) caTCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTAt > 1:636516/1‑193 (MQ=255) caTCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCG‑TTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTc < 1:336593/236‑1 (MQ=255) aTCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTa < 1:466963/251‑1 (MQ=255) aaaaaCGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTAcgc < 1:856662/251‑1 (MQ=255) aaaaaCGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTAcgc < 1:80084/251‑1 (MQ=255) aaCTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTAcg < 1:398731/243‑1 (MQ=255) cTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTa < 1:215444/229‑1 (MQ=255) cTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCAc < 1:400510/251‑1 (MQ=255) cTGGAAGATCTTGGTTTTGAAGCCATGCATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCa > 1:741625/1‑250 (MQ=255) ggAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCg > 1:253913/1‑251 (MQ=255) gaTCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTAcgc < 1:110513/235‑1 (MQ=255) tCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGa < 1:16496/251‑1 (MQ=255) ttGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGaac < 1:62591/251‑1 (MQ=255) ttttGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTAt > 1:726862/1‑166 (MQ=255) ccATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATAcc < 1:129726/251‑1 (MQ=255) ccATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATAc > 1:43460/1‑250 (MQ=255) tGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTAcg < 1:56064/216‑1 (MQ=255) tCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCAc < 1:471004/222‑1 (MQ=255) ccGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCg < 1:795504/251‑1 (MQ=255) cAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCgtg < 1:156753/250‑1 (MQ=255) cAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCgtg < 1:55834/250‑1 (MQ=255) aCGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATgg > 1:853690/1‑197 (MQ=255) gTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCGTGTGc > 1:332959/1‑249 (MQ=255) gTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCGTGTGCTTGGACAAAt > 1:565457/1‑251 (MQ=255) tttgccaaaaggcggtcAGATTGCGGGGGGTAATCGCAAAGACATGATTGAAAGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTGCCAAGAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCGTGTGCTTGGACAAATGc < 1:685426/235‑1 (MQ=255) tttGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCGTGTGCTTGGACAAATGc < 1:81370/251‑1 (MQ=255) aaaaGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCGTGTGCTTGGACAAATGCACAGcc < 1:574226/251‑1 (MQ=255) aaGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCGTGTGCTTGGACAAATGc < 1:600424/243‑1 (MQ=255) gTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTa < 1:830507/182‑1 (MQ=255) cGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCGTGTGCTTGGACAAATGCACAGCCTTtata < 1:597052/251‑1 (MQ=255) tACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATgg > 1:662275/1‑171 (MQ=255) tACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCg > 1:328831/1‑220 (MQ=255) gATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATAc > 1:830558/1‑207 (MQ=255) gATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGAATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGat > 1:118447/1‑169 (MQ=255) cgGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCGTGTGCTTGGACAAATGCACAGCCTTTATAAACCGCGCCcgggt < 1:550091/250‑1 (MQ=255) gTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGaac > 1:20843/1‑185 (MQ=255) gTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCg > 1:597928/1‑205 (MQ=255) gTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCGTGTGCTTGGACAAATGCACAGc > 1:566737/1‑227 (MQ=255) aTCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGa < 1:415989/190‑1 (MQ=255) gACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTAcgcg < 1:846325/156‑1 (MQ=255) gACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCGTGTGCTTGGACAAATGCACAGc < 1:518560/216‑1 (MQ=255) gACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCGTGTGCTTGGACAAATGCACAGCCTTTATAAACCGCGCCcgggt > 1:176756/1‑237 (MQ=255) aTGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGTATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCGTGTGCTTGGACAAATGCACAGCCTTTATAAACCGCGCCCGGGTCGGGTAAAAGATTatat < 1:435034/251‑1 (MQ=255) ccGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCGTGTGCTTGGACAAATGCACAGCCTTTATAAACCGCGCCCGGGTCGGGTAAAAGATTATATTGCCGTGCCGAAAGcc < 1:850191/251‑1 (MQ=255) aTCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCGTGTGCTTGGACAAATGCACAGCCTTTATAAACCGCGCCCGGGTCGGGTAAAAGATTATATTGCCGTGCCGAAAGCCAATGGCTa > 1:885516/1‑251 (MQ=255) ggCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCGTGTGCTTGGACAAATGCACAGCCTTTATAAACCGCGCCCGGGTCGGGTAAAAGATTATATTGCCGTGCCGAAAGCCAATGGCTATCAGt < 1:99793/249‑1 (MQ=255) ttGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCGTGTGCTTGGACAAATGCACAGCCTTTATAAACCGCGCCCGGGTCGGGTAAAAGATTATATTGCCGTGCCGAAAGCCAATGGCTATCAGTCCTTACa < 1:462924/251‑1 (MQ=255) tGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCgtgt < 1:610913/157‑1 (MQ=255) tGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCGTGTGCTTGGACAAATGCACAGCCTTTATAAACCGCGCCCGGGTCGGGTAAAAGATTATATTGCCGTGCCGAAAGCCAATGGCTATCAg > 1:704302/1‑242 (MQ=255) tGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCGTGTGCTTGGACAAATGCACAGCCTTTATAAACCGCGCCCGGGTCGGGTAAAAGATTATATTGCCGTGCCGAAAGCCAATGGCTATCAGTCCTTACAt < 1:476598/251‑1 (MQ=255) ggATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCgtg < 1:731225/152‑1 (MQ=255) aTGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCGTGTGCTTGGACAAATGCACAGCCTTTATAAACCGCGCCCGGGTCGGGTAAAAGATTATATtgc < 1:346955/211‑1 (MQ=255) aTGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCGTGTGCTTGGACAAATGCACAGCCTTTATAAACCGCGCCCGGGTCGGGTAAAAGATTATATTGCCGTGCCGAAAGCCAATGGCTATCAGTCCTTACa > 1:700758/1‑244 (MQ=255) gTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGaac < 1:292577/122‑1 (MQ=255) gTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCGTGTGCTTGGACAAATGCACAGCCTTTATAAACCGCGCCCGGGTCGGGTAAAAGATTATATtgc < 1:121963/205‑1 (MQ=255) cgcgGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCGTGTGCTTGGACAAATGCACAGCCTTTATAAACCGCGCCCGGGTCGGGTAAAAGATTATATTGCCGTGCCGAAAGCCAATGGCTATCAGTCCTTACATACGTCGATGATTGGTCCGCAc < 1:719484/251‑1 (MQ=255) | CCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTTGGGGATTGAGCACATCAAAAACGAACTGGAAAATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTGAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCATTATGGATATTTACGCGTTCCGCACCGTGGTGAACAACGTGGATACCTGCTATCGTGTGCTTGGACAAATGCACAGCCTTTATAAACCGCGCCCGGGTCGGGTAAAAGATTATATTGCCGTGCCGAAAGCCAATGGCTATCAGTCCTTACATACGTCGATGATTGGTCCGCAC > 1/1126731‑1127208 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |