| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,126,791 | T→C | intergenic (‑67238/‑5312) | unknown ← / → unknown | tRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,126,791 | 0 | T | C | 100.0% | 224.1 / NA | 82 | intergenic (‑67238/‑5312) | unknown/unknown | tRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (39/43); total (39/43) | |||||||||||
CGGAAATCGTAGAAGGCGTTTCAAAACTCGACAAACTCAAATTCAGAACCCGTCAAGAAGCGGAAGTGGCAAATTTCCGTAAAATGATCCTTGCCATGACCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATTGAGCACATCAAAAACGAACTGGAAAATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTGAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCAT > 1/1126547‑1127036 | cgGAAATCGTAGAAGGCGTTTCAAAACTCGACAAACTCAAATTCAGAACCCGTCAAGAAGCGGAAGTGGCAAATTTCCGTAAAATGATCCTTGCCATGACCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGcac < 1:307500/251‑1 (MQ=255)cgGAAATCGTAGAAGGCGTTTCAAAACTCGACAAACTCAAATTCAGAACCCGTCAAGAAGCGGAAGTGGCAAATTTCCGTAAAATGATCCTTGCCATGACCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGcac < 1:296770/251‑1 (MQ=255) aTCGTAGAAGGCGTTTCAAAACTCGACAAACTCAAATTCAGAACCCGTCAAGAAGCGGAAGTGGCAAATTTCCGTAAAATGATCCTTGCCATGACCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCaa > 1:376772/1‑251 (MQ=255) tCGTAGAAGGCGTTTCAAAACTCGACAAACTCAAATTCAGAACCCGTCAAGAAGCGGAAGTGGCAAATTTCCGTAAAATGATCCTTGCCATGACCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCaaa > 1:367380/1‑251 (MQ=255) gTAGAAGGCGTTTCAAAACTCGACAAACTCAAATTCAGAACCCGTCAAGAAGCGGAAGTGGCAAATTTCCGTAAAATGATCCTTGCCATGACCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCaaaaa > 1:833940/1‑251 (MQ=255) aCAAACTCAAATTCAGAACCCGTCAAGAAGCGGAAGTGGCAAATTTCCGTAAAATGATCCTTGCCATGACCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGttt < 1:381451/250‑1 (MQ=255) cTCAAATTCAGAACCCGTCAAGAAGCGGAAGTGGCAAATTTCCGTAAAATGATCCTTGCCATGACCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAg > 1:779682/1‑250 (MQ=255) cTCAAATTCAGAACCCGTCAAGAAGCGGAAGTGGCAAATTTCCGTAAAATGATCCTTGCCATGACCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGc < 1:774581/251‑1 (MQ=255) tCAGAACCCGTCAAGAAGCGGAAGTGGCAAATTTCCGTAAAATGATCCTTGCCATGACCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTAt < 1:139844/251‑1 (MQ=255) tCAGAACCCGTCAAGAAGCGGAAGTGGCAAATTTCCGTAAAATGATCCTTGCCATGACCAGGGATATTCGTGTGGTTCTCAGCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTAt < 1:452390/251‑1 (MQ=255) aaCCCGTCAAGAAGCGGAAGTGGCAAATTTCCGTAAAATGATCCTTGCCATGACCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGc < 1:491281/251‑1 (MQ=255) cGTCAAGAAGCGGAAGTGGCAAATTTCCGTAAAATGATCCTTGCCATGACCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACg < 1:485713/251‑1 (MQ=255) gTCAAGAAGCGGAAGTGGCAAATTTCCGTAAAATGATCCTTGCCATGACCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAACCGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGt > 1:158773/1‑251 (MQ=255) gTCAAGAAGCGGAAGTGGCAAATTTCCGTAAAATGATCCTTGCCATGACCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGt > 1:653611/1‑251 (MQ=255) tCAAGAAGCGGAAGTGGCAAATTTCCGTAAAATGATCCTTGCCATGACCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTTGGGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGt < 1:282246/251‑1 (MQ=255) aagCGGAAGTGGCAAATTTCCGTAAAATGATCCTTGCCATGACCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCg > 1:706218/1‑251 (MQ=255) cGGAAGTGGCAAATTTCCGTAAAATGATCCTTGCCATGACCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCgg < 1:58698/249‑1 (MQ=255) gTGGCAAATTTCCGTAAAATGATCCTTGCCATGACCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCa > 1:412999/1‑251 (MQ=255) aaTTTCCGTAAAATGATCCTTGCCATGACCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGt < 1:299806/251‑1 (MQ=255) aTCCTTGCCATGACCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTgcgcg < 1:665490/251‑1 (MQ=255) tCCTTGCCATGACCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAACAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTgcgcg > 1:454076/1‑250 (MQ=255) tGCCATGACCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTa > 1:171315/1‑251 (MQ=255) aTGACCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCg < 1:514421/251‑1 (MQ=255) gACCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCTTGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCa > 1:58477/1‑251 (MQ=255) aCCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCaa > 1:364200/1‑251 (MQ=255) atatTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACAt < 1:682822/250‑1 (MQ=255) gtgtGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCaa < 1:118276/206‑1 (MQ=255) tgtgGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAAc < 1:223615/251‑1 (MQ=255) gTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCaa < 1:848951/201‑1 (MQ=255) tcaAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCcgac < 1:416070/251‑1 (MQ=255) cTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAAt > 1:236755/1‑251 (MQ=255) cgaccgaACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAg < 1:762166/251‑1 (MQ=255) accgaACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAggg < 1:473330/251‑1 (MQ=255) aaCCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGtt > 1:873461/1‑251 (MQ=255) aaCCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGtt > 1:263162/1‑251 (MQ=255) aCCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGttt > 1:902122/1‑251 (MQ=255) aTGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGAt > 1:253584/1‑209 (MQ=255) aTGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAggg < 1:878689/237‑1 (MQ=255) tGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGAtgtg > 1:717617/1‑251 (MQ=255) cgcACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAGAGAAACCCTGGAGATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAGGCCATGTAGCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTGATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTggg < 1:497371/251‑1 (MQ=255) cgcACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTa > 1:727438/1‑152 (MQ=255) cgcACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTggg < 1:660520/251‑1 (MQ=255) cgcACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTggg < 1:495507/251‑1 (MQ=255) cgcACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTggg < 1:501206/251‑1 (MQ=255) cccTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTGTGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTAtt > 1:117099/1‑251 (MQ=255) cccTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCa < 1:119845/142‑1 (MQ=255) cccTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGc > 1:775415/1‑151 (MQ=255) cccTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTAtt > 1:402600/1‑251 (MQ=255) cccTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTAtt < 1:153790/251‑1 (MQ=255) cTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCa < 1:219628/251‑1 (MQ=255) cTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCa > 1:718935/1‑251 (MQ=255) gcgcATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAgcg > 1:393125/1‑251 (MQ=255) cgcATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAg < 1:164219/248‑1 (MQ=255) cATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCgg > 1:41916/1‑251 (MQ=255) tCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTc < 1:710691/250‑1 (MQ=255) ccGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAg > 1:559403/1‑250 (MQ=255) tcgtATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCAtt > 1:371695/1‑251 (MQ=255) aTCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTa < 1:524674/251‑1 (MQ=255) ccAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGc < 1:224220/250‑1 (MQ=255) ccAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGc < 1:732024/250‑1 (MQ=255) aaaGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTc < 1:62814/225‑1 (MQ=255) aaGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCa < 1:219115/211‑1 (MQ=255) ggAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCaaaaa > 1:762653/1‑51 (MQ=255) tttATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGc > 1:560318/1‑94 (MQ=255) tttATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAGGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATgcg > 1:451715/1‑250 (MQ=255) tttATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAg > 1:118622/1‑198 (MQ=255) tttATGCACCGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCggg > 1:259763/1‑212 (MQ=255) cgccGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTaaa < 1:901830/248‑1 (MQ=255) ccGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAg < 1:827587/190‑1 (MQ=255) ccGTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGa > 1:409065/1‑251 (MQ=255) gTTGGCGCATCGCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGAt > 1:416900/1‑250 (MQ=255) gCTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCAt > 1:322139/1‑251 (MQ=255) cTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTc < 1:325304/187‑1 (MQ=255) cTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCggg > 1:588722/1‑190 (MQ=255) cTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCaaaa > 1:222740/1‑222 (MQ=255) cTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCAtt > 1:306005/1‑251 (MQ=255) cTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCAtt > 1:48880/1‑251 (MQ=255) cTT‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCAt < 1:251912/250‑1 (MQ=255) tt‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTc < 1:674996/251‑1 (MQ=255) tt‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTc < 1:357349/251‑1 (MQ=255) t‑GGGGATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTcc < 1:257088/251‑1 (MQ=255) ggATCGAGCACATCAAAAACGAACTGGAAGATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTAAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCAt < 1:706129/250‑1 (MQ=255) | CGGAAATCGTAGAAGGCGTTTCAAAACTCGACAAACTCAAATTCAGAACCCGTCAAGAAGCGGAAGTGGCAAATTTCCGTAAAATGATCCTTGCCATGACCAGGGATATTCGTGTGGTTCTCATCAAACTTGCCGACCGAACCCACAACATGCGCACCCTCAGCGCATTACGTCCCGATAAACGCCGTCGTATCGCCAAAGAAACCCTGGAAATTTATGCACCGTTGGCGCATCGCTT‑GGGGATTGAGCACATCAAAAACGAACTGGAAAATCTTGGTTTTGAAGCCATGTATCCGCAACGTTATGCGGTTTTGCAAAAAGTCGTACAGATTGCGCGCGGTAATCGCAAAGACATGATTGAACGAATTTCCGACGAAATCAAAGGGCGTTTGCAGGATGTGGGTATTCAAGCGCGGGTATTCGGGCGTGAAAAGCATTTGTATGCCATCTACCAAAAAATGCGCTTAAAAGATCAGCAGTTTCATTCCAT > 1/1126547‑1127036 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |