| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,120,832 | C→T | intergenic (‑61279/‑11271) | unknown ← / → unknown | tRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,120,832 | 0 | C | T | 100.0% | 234.0 / NA | 87 | intergenic (‑61279/‑11271) | unknown/unknown | tRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (35/52); total (35/52) | |||||||||||
ACGTAAGAAAAGATGCTGTAATTGCCGTTTCTTCTCGATAAAAATGCGATCCAAAGCGATTTCAATGCGTTGTTGACGATATTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGCCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGATAAATAATGACTTTCAGACTCGGATCACGACGTTGTAGAATATGCAAAATATCCTGCAATGCCGCCCCGGTTTTAGAGGTAATAATGCCTAC > 1/1120590‑1121072 | aCGTAAGAAAAGATGCTGTAATTGCCGTTTCTTCTCGATAAAAATGCGATCCAAAGCGATTTCAATGCGTTGTTGACGATATTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAAt < 1:784228/249‑1 (MQ=255) tAAGAAAAGATGCTGTAATTGCCGTTTCTTCTCGATAAAAATGCGATCCAAAGCGATTTCAATGCGTTGTTGACGATATTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATttct < 1:212624/250‑1 (MQ=255) aTGCTGTAATTGCCGTTTCTTCTCGATAAAAATGCGATCCAAAGCGATTTCAATGCGTTGTTGACGATATTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGc < 1:802282/251‑1 (MQ=255) aTGCTGTAATTGCCGTTTCTTCTCGATAAAAATGCGATCCAAAGCGATTTCAATGCGTTGTTGACGATATTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGG‑AATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGca > 1:308455/1‑251 (MQ=255) gTAATTGCCGTTTCTTCTCGATAAAAATGCGATCCAAAGCGATTTCAATGCGTTGTTGACGATATTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGcacca > 1:717369/1‑250 (MQ=255) gCCGTTTCTTCTCGATAAAAATGCGATCCAAAGCGATTTCAATGCGTTGTTGACGATATTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAAt > 1:301214/1‑249 (MQ=255) aTAAAAATGCGATCCAAAGCGATTTCAATGCGTTGTTGACGATATTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAaccac > 1:499783/1‑250 (MQ=255) aTCCAAAGCGATTTCAATGCGTTGTTGACGATATTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCa > 1:175389/1‑251 (MQ=255) aaaGCGATTTCAATGCGTTGTTGACGATATTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGAt < 1:685716/251‑1 (MQ=255) ttttCAATGCGTTGTTGACGATATTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCGCCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATAc < 1:321508/250‑1 (MQ=255) aTTTCAATGCGTTGTTGACGATATTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATAc < 1:144104/251‑1 (MQ=255) aTTTCAATGCGTTGTTGACGATATTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCAAACCACCGCCGCGCCCCACGATTAATAc < 1:766617/251‑1 (MQ=255) cGTTGTTGACGATATTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCct > 1:720762/1‑250 (MQ=255) ttgttgACGATATTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAAt < 1:515441/180‑1 (MQ=255) ttgttgACGATATTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCtt > 1:524300/1‑251 (MQ=255) tgttgACGATATTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTg < 1:675714/251‑1 (MQ=255) gttgACGATATTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTg > 1:316975/1‑250 (MQ=255) cGATATTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATAc > 1:357379/1‑233 (MQ=255) atatTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAacc < 1:340513/207‑1 (MQ=255) atatTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATAc > 1:787328/1‑231 (MQ=255) atatTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGt > 1:525791/1‑251 (MQ=255) atatTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGt > 1:130844/1‑251 (MQ=255) tatTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATc > 1:671133/1‑194 (MQ=255) atTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTg > 1:328365/1‑251 (MQ=255) gctgTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCa > 1:358464/1‑251 (MQ=255) ctgTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCgcgc > 1:879836/1‑205 (MQ=255) ctgTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATc > 1:816967/1‑222 (MQ=255) gTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATAc < 1:385040/217‑1 (MQ=255) gTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAAt > 1:359361/1‑250 (MQ=255) aataatTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGCTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCAt > 1:32064/1‑251 (MQ=255) ataatTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGGGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCAtt < 1:409881/251‑1 (MQ=255) ccGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCg > 1:293943/1‑251 (MQ=255) cGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGa < 1:826893/251‑1 (MQ=255) gATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTaa < 1:358463/153‑1 (MQ=255) gATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCa > 1:647007/1‑251 (MQ=255) ccccAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATcc < 1:395717/194‑1 (MQ=255) cACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATc > 1:790860/1‑156 (MQ=255) cACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAgcc > 1:506026/1‑244 (MQ=255) cccAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATc < 1:423161/250‑1 (MQ=255) ctctGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTAc < 1:438882/251‑1 (MQ=255) ctctGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTAc < 1:471685/251‑1 (MQ=255) ctctGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTAc < 1:101448/251‑1 (MQ=255) ctGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCCCCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCt < 1:238098/251‑1 (MQ=255) cgGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCt < 1:247351/245‑1 (MQ=255) ggCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGCTTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATc > 1:446427/1‑237 (MQ=255) cAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACgg > 1:659117/1‑249 (MQ=255) gAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACgg > 1:78444/1‑247 (MQ=255) gggTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAGCATCGCGCGCGTCACAATTTCTTCATTAAAGCCCCACAAATCTTCCAGCAAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTAc < 1:100357/234‑1 (MQ=255) ggTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCCCCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGa < 1:151434/250‑1 (MQ=255) ggTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGa < 1:46036/250‑1 (MQ=255) ggTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGa < 1:264841/250‑1 (MQ=255) ggTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGa < 1:412810/250‑1 (MQ=255) ggTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGa < 1:631156/250‑1 (MQ=255) gTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGataaat < 1:217238/250‑1 (MQ=255) gTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGataaat < 1:191999/250‑1 (MQ=255) cgcgTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCGCGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGa < 1:265282/242‑1 (MQ=255) cgcgTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTgg < 1:788999/240‑1 (MQ=255) gcgTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATAc < 1:262879/159‑1 (MQ=255) tGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGa > 1:136960/1‑215 (MQ=255) tGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGATAAATAATGACTTTCAGACTCGGATCacgac > 1:160629/1‑246 (MQ=255) tGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGATAAATAATGACTTTCAGACTCGGATCACGACGTTGt > 1:444214/1‑251 (MQ=255) ggTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGATAAATAATGACTTTCAGAc > 1:530033/1‑233 (MQ=255) ggTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGATAAATAATGACTTTCAGACTCGGATCa < 1:370660/241‑1 (MQ=255) ggTAATATCGGTTTCATGACCGACAGCGCT‑ATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATAc < 1:816818/131‑1 (MQ=255) gTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCAttt > 1:219883/1‑169 (MQ=255) tAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGATAAATAATGACTTTCAGACTCGGATCACGACGTTGTAg < 1:69681/250‑1 (MQ=255) aaTATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCCCCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCGGCCGCCGCATCTTTACCTTGCACGGCTGTGGGATAAATAATGACTTTCAGACTCGGATCACGACGTTGTAGaa < 1:577755/251‑1 (MQ=255) aaTATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGATAAATAATGACTTTCAGACTCGGATCACGACGTTGTAGaa < 1:314149/251‑1 (MQ=255) atatCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGATAAATAATGACTTTCAGACTCGGATCACGACGTTGTAGAat < 1:235540/251‑1 (MQ=255) tatCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCg < 1:668822/142‑1 (MQ=255) tatCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGATAAATAATGACTTTCAGACTCGGATCacga > 1:728342/1‑239 (MQ=255) tatCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGATAAATAATGACTTTCAGACTCGGATCACGACGTTGTAGaa > 1:92197/1‑249 (MQ=255) aTGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGc > 1:269927/1‑192 (MQ=255) aTGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGATAAATAATGACTTTCAGACTCGGATCACGACGTTGTAGAATATGCAAAatat < 1:482102/251‑1 (MQ=255) gcgcTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATAAATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGa < 1:324923/189‑1 (MQ=255) cgcTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATAc < 1:252383/106‑1 (MQ=255) cgcTAATGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGATAAATAATGACTTTCAGACTCGGATCACGACGTTGTAGAATATGCAAAATATCCTGCaa < 1:748097/247‑1 (MQ=255) tGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGa < 1:792635/182‑1 (MQ=255) tGATTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGATAAATAATGAc < 1:616135/193‑1 (MQ=255) aTTGGAATGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGATAAATAATGACTTTCAGACTCGGATCACGACGTTGTAGaa < 1:599206/220‑1 (MQ=255) tGACGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCCCCACAAATCTTCCAGCGACCCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGATAAATAATGACTTTCAGACTCGGATCACGACGTTGTAGAATATGCAAAATATCCTGCAATGCCGCCCCGGTTTTagag < 1:474189/251‑1 (MQ=255) gACGGAATGAAACATCGCGCGCATCACAATTTCTTCATAAAAACACCACAAATCCTCCAGCGAACCACCGACGCGCCCCACGTTTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGATAAATAATGACTTTCAGACTCGGATCACGACGTTGTAGAATATGCAAAATATCCTGCAATGCCGCCCCGGTTTTagag < 1:561566/250‑1 (MQ=255) aCGGAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGATAAATAATGACTTTCAGACTCGGATCACGACGTTGTAGAATATGCAAAATATCCTGCAATGCCGCCCCGGTTTTAGAGGt < 1:719165/251‑1 (MQ=255) gAATGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTgg > 1:520226/1‑166 (MQ=255) aTGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCGCCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCAc < 1:168439/156‑1 (MQ=255) aTGAAACATCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGATAAATAATGACTTTCAGACTCGGATCACGACGTTGTAGAATATGCAAAATATCCTGc < 1:863525/223‑1 (MQ=255) aTCGCGCGCGTCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGATAAATAATGACTTTCAGACTCGGATCACGACGTTGTAGAATATGCAAAATATCCTGCAATGCCGCCCCGGTTTTAGAGGTAATAATGCCTAc < 1:811581/251‑1 (MQ=255) | ACGTAAGAAAAGATGCTGTAATTGCCGTTTCTTCTCGATAAAAATGCGATCCAAAGCGATTTCAATGCGTTGTTGACGATATTGTAACTGCTGTAATAATTCCGTTTGATCGCGGCTCACCAGCTCTGCCGCGGCAGAAGGGGTCGGTGCGCGTAAATCGGCGACAAAATCGGCAATGGTAATATCGGTTTCATGACCGACAGCGCTAATGATTGGAATGACGGAATGAAACATCGCGCGCGCCACAATTTCTTCATTAAAGCACCACAAATCTTCCAGCGAACCACCGCCGCGCCCCACGATTAATACATCCGCCTCTTGTCGCCGGTTGGCGATTTCAATCATTTGTGCGATTTCAGCCGCCGCATCTTTACCTTGCACGGCTGTGGGATAAATAATGACTTTCAGACTCGGATCACGACGTTGTAGAATATGCAAAATATCCTGCAATGCCGCCCCGGTTTTAGAGGTAATAATGCCTAC > 1/1120590‑1121072 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |