| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,117,113 | G→A | intergenic (‑57560/‑14990) | unknown ← / → unknown | tRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,117,113 | 0 | G | A | 100.0% | 228.5 / NA | 84 | intergenic (‑57560/‑14990) | unknown/unknown | tRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (44/40); total (44/40) | |||||||||||
TGTCTTATTATTAACCGTTATAACGGAATTTGTATTGTATGAATATTCGTTTGAATATTATCTTAGCCGTGATTGCGCTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTGGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCTGTATCTGGATGGCAATGTCATCGCACAAAGCCTTTCCGCGCAATCTCGTTTGCAACGCATTGAAACCCAACGCGCGGTGGTTAATTTGACA > 1/1116893‑1117359 | tgtCTTATTATTAACCGTTATAACGGAATTTGTATTGTATGAATATTCGTTTGAATATTATCTTAGCCGTGATTGCGCTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATAcc < 1:811715/251‑1 (MQ=255)tgtCTTATTATTAACCGTTATAACGGAATTTGTATTGTATGAATATTCGTTTGAATATTATCTTAGCCGTGATTGCGCTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATAc < 1:123783/250‑1 (MQ=255)tgtCTTATTATTAACCGTTATAACGGAATTTGTATTGTATGAATATTCGTTTGAATATTATCTTAGCCGTGATTGCGCTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATAc < 1:577044/250‑1 (MQ=255) gtCTTATTATTAACCGTTATAACGGAATTTGTATTGTATGAATATTCGTTTGAATATTATCTTAGCCGTGATTGCGCTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATAc > 1:27572/1‑249 (MQ=255) tCTTATTATTAACCGTTATAACGGAATTTGTATTGTATGAATATTCGTTTGAATATTATCTTAGCCGTGATTGCGCTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCt < 1:878392/250‑1 (MQ=255) ttaACCGTTATAACGGAATTTGTATTGTATGAATATTCGTTTGAATATTATCTTAGCCGTGATTGCGCTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGAc < 1:234088/251‑1 (MQ=255) gAATTTGTATTGTATGAATATTCGTTTGAATATTATCTTAGCCGTGATTGCGCTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTcaa > 1:663757/1‑250 (MQ=255) gtattgtatGAATATTCGTTTGAATATTATCTTAGCCGTGATTGCGCTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCgg > 1:685856/1‑251 (MQ=255) gaattgtatGAATATTCGTTTGAATATTATCTTAGCCGTGATTGCGCTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTTGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATAGCTCGGATGGACATACGGATTTTCaacaac > 1:707772/3‑248 (MQ=255) tattgtatGAATATTCGTTTGAATATTATCTTAGCCGTGATTGCGCTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGt < 1:381973/251‑1 (MQ=255) gtatGAATATTCGTTTGAATATTATCTTAGCCGTGATTGCGCTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGAc < 1:635575/225‑1 (MQ=255) gtatGAATATTCGTTTGAATATTATCTTAGCCGTGATTGCGCTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACgg > 1:401369/1‑231 (MQ=255) gtatGAATATTCGTTTGAATATTATCTTAGCCGTGATTGCGCTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCgtg > 1:840388/1‑251 (MQ=255) atTCGTTTGAATATTATCTTAGCCGTGATTGCGCTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGtgttg < 1:892845/246‑1 (MQ=255) cGTTTGAATATTATCTTAGCCGTGATTGCGCTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGa < 1:891340/251‑1 (MQ=255) cGTTTGAATATTATCTTAGCCGTGATTGCGCTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGa < 1:206265/251‑1 (MQ=255) tttGAATATTATCTTAGCCGTGATTGCGCTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGata > 1:461039/1‑251 (MQ=255) gAATATTATCTTAGCCGTGATTGCGCTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCt < 1:327510/200‑1 (MQ=255) atatTATCTTAGCCGTGATTGCGCTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGa < 1:467947/244‑1 (MQ=255) tattatCTTAGCCGTGATTGCGCTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGaaa < 1:428584/251‑1 (MQ=255) atCTTAGCCGTGATTGCGCTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCa > 1:770870/1‑251 (MQ=255) gCCGTGATTGCGCTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACgg < 1:490752/202‑1 (MQ=255) ccGTGATTGCGCTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGtgttgttg > 1:311672/1‑227 (MQ=255) gcgcTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATaaaga > 1:106859/1‑251 (MQ=255) gggTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATaaagaaag > 1:651368/1‑249 (MQ=255) gTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTgg > 1:226475/1‑251 (MQ=255) gTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTgg > 1:623822/1‑251 (MQ=255) tGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTc < 1:631699/251‑1 (MQ=255) ggCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGC‑AAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATaaag < 1:320379/235‑1 (MQ=255) ggTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAgcg > 1:367262/1‑249 (MQ=255) ggTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAgcg > 1:210820/1‑249 (MQ=255) gTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGAtt < 1:284175/176‑1 (MQ=255) gTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGtgttgttg > 1:695675/1‑199 (MQ=255) gTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGa < 1:440905/204‑1 (MQ=255) tttATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATAc > 1:93001/1‑154 (MQ=255) tttATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGAt > 1:203456/1‑161 (MQ=255) ttATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGAc < 1:832208/164‑1 (MQ=255) tataGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACaa < 1:641017/251‑1 (MQ=255) aGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAg > 1:576214/1‑250 (MQ=255) ccTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCa < 1:297234/250‑1 (MQ=255) gAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATAc < 1:523668/144‑1 (MQ=255) gAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGtgttg > 1:722450/1‑184 (MQ=255) gAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGat < 1:735444/193‑1 (MQ=255) gAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGAt > 1:146709/1‑251 (MQ=255) gAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGAt > 1:329164/1‑251 (MQ=255) gAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGAt > 1:292162/1‑251 (MQ=255) gAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGAt > 1:41370/1‑251 (MQ=255) aaGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGAc > 1:525426/1‑250 (MQ=255) gagGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCa > 1:528164/1‑240 (MQ=255) tttGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGTAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGc < 1:451018/251‑1 (MQ=255) tttGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAatat < 1:441549/249‑1 (MQ=255) tttGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAatat < 1:139571/249‑1 (MQ=255) tttGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGc < 1:561910/251‑1 (MQ=255) tCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCTGTATCTgg < 1:870437/251‑1 (MQ=255) gATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGa > 1:35446/1‑162 (MQ=255) cGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCTGTATCTGGATGGCAATGTc < 1:415745/251‑1 (MQ=255) ggCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAGAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTc < 1:417815/108‑1 (MQ=255) ggCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCTGTATCTGGATGGCAATGTCa > 1:620838/1‑251 (MQ=255) gTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCTGTATCTGGATGGCAATGTCATCGCACaa > 1:810339/1‑251 (MQ=255) ggAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCTGTATCTGGATGGCAATGTCATCGCACAAAGc > 1:124736/1‑250 (MQ=255) ggAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCTGTATCTGGATGGCAATGTCATCGCACAAAGc > 1:698923/1‑250 (MQ=255) gAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCa > 1:174086/1‑195 (MQ=255) gTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCt < 1:15905/212‑1 (MQ=255) aaaaTGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATAc < 1:489860/77‑1 (MQ=255) aaTGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGc > 1:543913/1‑200 (MQ=255) cACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATCATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCTGTATCTGGATGGCAATGTCATCGCACAAAGCCTTTCCGCGCAATCTCGTTTGCaa < 1:769521/250‑1 (MQ=255) cTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCTGTAt > 1:115970/1‑197 (MQ=255) cTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCTGTATCTGGATGGCAATGTCATCGCACAAAGCCTTTCCGCGCAATCTCGTTTGCAACg > 1:616892/1‑250 (MQ=255) cTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCTGTATCTGGATGGCAATGTCATCGCACAAAGCCTTTCCGCGCAATCTCGTTTGCAACg > 1:99924/1‑250 (MQ=255) cTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCTGTATCTGGATGGCAATGTCATCGCACAAAGCCTTTCCGCGCAATCTCGTTTGCAACg > 1:179574/1‑250 (MQ=255) cTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCTGTATCTGGATGGCAATGTCATCGCACAAAGCCTTTCCGCGCAATCTCGTTTGCAACGc < 1:414800/251‑1 (MQ=255) aCCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAAc < 1:854897/151‑1 (MQ=255) aCCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCTGTATCTGGa > 1:591871/1‑200 (MQ=255) aCCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCTGTATCTGGATGGCaa > 1:257908/1‑206 (MQ=255) aCCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCTGTATCTGGATGGCAATGTCATCGCACAAAGcc < 1:369012/223‑1 (MQ=255) aCCGTGTATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCTGTATCTGGATGGCAATGTCATCGCACAAAGCCTTTCCGCGCAATCTCGTTTGCAACGCAt > 1:847956/1‑251 (MQ=255) gtgtATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGAc > 1:814097/1‑180 (MQ=255) gtATTCGCCCACCGGCAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCTGTATCTGGATGGCAATGTCATCGCACAAAGCCTTTCCGCGCAATCTCGTTTGCAACGCATTGaaa > 1:46666/1‑251 (MQ=255) cAAAAAACAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCTGTATCTGGATGGCAATGTCATCGCACAAAGCCTTTCCGCGCAATCTCGTTTGCAACGCATTGAAACCCAACGCGCggtgg < 1:316765/251‑1 (MQ=255) aaaCAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCTGTATCTGGATGGCAATGTCATCGCACAAAGCCTTTc < 1:649994/203‑1 (MQ=255) aaaCAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCTGTATCTGGATGGCAATGTCATCGCACAAAGCCTTTCCGCGCAATCTCGTTTGCAACGCATTGAAACCCAACGCGCGGTGGTTaa > 1:582722/1‑251 (MQ=255) cAATATTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGGTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCTGTATCTGGATGGCAATGTCATCGCACAAAGCCTTTCCGCGCAATCTCGTTTGCAACGCATTGAAACCCAACGCGCGGTGGTTAAttt < 1:446579/251‑1 (MQ=255) atTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCTGTATCTGGATGGCAATGTCATCGCACAAAGCCTTTc < 1:219392/196‑1 (MQ=255) atTTAGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCTGTATCTGGATGGCAATGTCATCGCACAAAGCCTTTCCGCGCAATCTCGTTTGCAACGCATTGAAACCCAACGCGCGGTGGTTAATTTGaca > 1:225476/1‑251 (MQ=255) | TGTCTTATTATTAACCGTTATAACGGAATTTGTATTGTATGAATATTCGTTTGAATATTATCTTAGCCGTGATTGCGCTGGGTTTATTGGCCTGGTTTTATAGCCTGAATAAAGAGGACGGAAGTTTGAAAGATCTGATTAAAACGGCAGATAGTCCGGAATATGTCGGGCAGAAAATGAGCACTACCGTGTATTCGCCCACCGGCAAAAAACAATATTTGGCGACCTCCGCAAAAGTGGAACATTATACCTCGGATGGACATACGGATTTTCAACAACCGGTCGTGTTGTTGTTAGATATTGAAATTCAAAATACGGATAAAGAAAGCTGGAAACTCAGCGCTGACAAAGCACGATTGACCAAAGACAATATGCTGTATCTGGATGGCAATGTCATCGCACAAAGCCTTTCCGCGCAATCTCGTTTGCAACGCATTGAAACCCAACGCGCGGTGGTTAATTTGACA > 1/1116893‑1117359 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |