Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,092,331	G→C	intergenic (‑32778/‑39772)	unknown ← / → unknown	tRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,092,331	0	G	C	100.0%	199.0 / NA	69	intergenic (‑32778/‑39772)	unknown/unknown	tRNA‑Ser‑GGA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (38/31);  total (38/31)

TTCGGAAATACGATTGGCGAGGCGGTTAAGTGCGGTCAGAACCTGCGGATTTTTTGCTGCAAAATCGGCTTTCATTAGTGGCGCACCTTGATAGGCAGGGAATAAATTAATGTCGTCTTTCAGTAAGTGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAAGTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAGGTATTTTGATATGCCATCGGCGGT‑AAAAATTCAAGCCGGAACTGTTCCGCCAGTAATTGTTTACTCAGCTGATAAGTGGTTTCAGGAG  >  1/1092087‑1092574                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                     ttCGGAAATACGATTGGCGAGGCGGTTAAGTGCGGTCAGAACCTGCGGATTTTTTGCTGCAAAATCGGCTTTCATTAGTGGCGCACCTTGATAGGCAGGGAATAAATTAATGTCGTCTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGc                                                                                                                                                                                                                                                <  1:727400/251‑1 (MQ=255) ttCGGAAATACGATTGGCGAGGCGGTTAAGTGCGGTCAGAACCTGCGGATTTTTTGCTGCAAAATCGGCTTTCATTAGTGGCGCACCTTGATAGGCAGGGAATAAATTAATGTCGTCTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGc                                                                                                                                                                                                                                                <  1:316814/251‑1 (MQ=255)     gAAATACGATTGGCGAGGCGGTTAAGTGCGGTCAGAACCTGCGGATTTTTTGCTGCAAAATCGGCTTTCATTAGTGGCGCACCTTGATAGGCAGGGAATAAATTAATGTCGTCTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGc                                                                                                                                                                                                                                                <  1:245905/247‑1 (MQ=255)                 gCGAGGCGGTTAAGTGCGGTCAGAACCTGCGGATTTTTTGCTGCAAAATCGGCTTTCATTAGTGGCGCACCTTGATAGGCAGGGAATAAATTAATGTCGTCTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTc                                                                                                                                                                                                                                 <  1:472300/250‑1 (MQ=255)                         gTTAAGTGCGGTCAGAACCTGCGGATTTTTTGCTGCATAATCGGCTTTCATTAGTGGCGCACCTTGATAGGCAGGGAATAAATTAATGTCGTCTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGcc                                                                                                                                                                                                                                               <  1:868065/228‑1 (MQ=255)                         gTTAAGTGCGGTCAGAACCTGCGGATTTTTTGCTGCAAAATCGGCTTTCATTAGTGGCGCACCTTGATAGGCAGGGAATAAATTAATGTCGTCTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAg                                                                                                                                                                                                                         <  1:423928/250‑1 (MQ=255)                          ttAAGTGCGGTCAGAACCTGCGGATTTTTTGCTGCAAAATCGGCTTTCATTAGTGGCGCACCTTGATAGGCAGGGAATAAATTAATGTCGTCTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGc                                                                                                                                                                                                                        <  1:857517/250‑1 (MQ=255)                          ttAAGTGCGGTCAGAACCTGCGGATTTTTTGCTGCAAAATCGGCTTTCATTAGTGGCGCACCTTGATAGGCAGGGAATAAATTAATGTCGTCTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGc                                                                                                                                                                                                                        <  1:207179/250‑1 (MQ=255)                                        aaCCTGCGGATTTTTTGCTGCAAAATCGGCTTTCATTAGTGGCGCACCTTGATAGGCAGGGAATAAATTAATGTCGTCTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACtcgatcga                                                                                                                                                                                                         >  1:696226/1‑251 (MQ=255)                                                    ttttGCTGCAAAATCGGCTTTCATTAGTGGCGCACCTTGATAGGCAGGGAATAAATTAATGTCGTCTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAgtg                                                                                                                                                                                             <  1:418443/251‑1 (MQ=255)                                                          tgcAAAATCGGCTTTCATTAGTGGCGCACCTTGATAGGCAGGGAATAAATTAATGTCGTCTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGc                                                                                                                                                                                       <  1:561356/251‑1 (MQ=255)                                                                         cATTAGTGGCGCACCTTGATAGGCAGGGAATAAATTAATGTCGTCTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCa                                                                                                                                                                         >  1:472017/1‑250 (MQ=255)                                                                          aTTAGTGGCGCACCTTGATAGGCAGGGAATAAATTAATGTCGTCTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCAcc                                                                                                                                                                       <  1:163211/251‑1 (MQ=255)                                                                           ttAGTGGCGCACCTTGATAGGCAGGGAATAAATTAATGTCGTCTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCt                                                                                                                                                                      <  1:736702/251‑1 (MQ=255)                                                                              gTGGCGCACCTTGATAGGCAGGGAATAAATTAATGTCGTCTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTGATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGc                                                                                                                                                                    >  1:440554/1‑250 (MQ=255)                                                                                      ccTTGATAGGCAGGGAATAAATTAATGTCGTCTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGc                                                                                                                                                                                                                                                <  1:411598/166‑1 (MQ=255)                                                                                      ccTTGATAGGCAGGGAATAAATTAATGTCGTCTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACatgatg                                                                                                                                                           >  1:818342/1‑251 (MQ=255)                                                                                      ccTTGATAGGCAGGGAATAAATTAATGTCGTCTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACatgatg                                                                                                                                                           >  1:70151/1‑251 (MQ=255)                                                                                        ttGATAGGCAGGGAATAAATTAATGTCGTCTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTa                                                                                                                                                         >  1:525730/1‑251 (MQ=255)                                                                                           aTAGGCAGGGAATAAATTAATGTCGTCTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAAt                                                                                                                                                      <  1:547176/251‑1 (MQ=255)                                                                                                    gAATAAATTAATGTCGTCTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGAttg                                                                                                                                             >  1:738203/1‑251 (MQ=255)                                                                                                     aaTAAATTAATGTCGTCTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGAttgt                                                                                                                                            <  1:85715/251‑1 (MQ=255)                                                                                                        aaaTTAATGTCGTCTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGAttgttg                                                                                                                                          >  1:24468/1‑250 (MQ=255)                                                                                                             aaTGTCGTCTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAAt                                                                                                                                                      <  1:231225/233‑1 (MQ=255)                                                                                                                   gtcTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCAtgtg                                                                                                                              >  1:827319/1‑251 (MQ=255)                                                                                                                    tcTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATgtgt                                                                                                                             <  1:583701/251‑1 (MQ=255)                                                                                                                    tcTTTCAGTAAGCGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATgtgt                                                                                                                             <  1:725171/251‑1 (MQ=255)                                                                                                                                  gAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATgtgt                                                                                                                             >  1:327730/1‑237 (MQ=255)                                                                                                                                  gAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGct                                                                                                                <  1:857663/250‑1 (MQ=255)                                                                                                                                      tGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCttt                                                                                                           <  1:420524/251‑1 (MQ=255)                                                                                                                                      tGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCttt                                                                                                           <  1:435523/251‑1 (MQ=255)                                                                                                                                       gATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGct                                                                                                                >  1:690143/1‑245 (MQ=255)                                                                                                                                       gATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCttt                                                                                                           >  1:416916/1‑250 (MQ=255)                                                                                                                                        aTGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGCGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGcc                                                                                                                                                                                                                       >  1:644468/1‑141 (MQ=255)                                                                                                                                            tgttTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGct                                                                                                                <  1:125474/240‑1 (MQ=255)                                                                                                                                                      cTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAg                                                                                           <  1:341463/251‑1 (MQ=255)                                                                                                                                                             aGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGcc                                                                                                                                    >  1:506139/1‑203 (MQ=255)                                                                                                                                                              gTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAgtgt                                                                                                                                                                                            >  1:388453/1‑146 (MQ=255)                                                                                                                                                              gTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAGGTATTTTg                                                                                   >  1:73718/1‑251 (MQ=255)                                                                                                                                                               tAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAGGTAtttt                                                                                    <  1:307257/249‑1 (MQ=255)                                                                                                                                                               tAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAGGTATTTTGa                                                                                  <  1:216417/251‑1 (MQ=255)                                                                                                                                                                                 aaTCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAGGTATTTTGat                                                                                 <  1:667260/234‑1 (MQ=255)                                                                                                                                                                                  aTCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATgtgt                                                                                                                             <  1:77953/189‑1 (MQ=255)                                                                                                                                                                                              gttgAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAg                                                                                                                                                                                                                         >  1:684418/1‑85 (MQ=255)                                                                                                                                                                                                 gAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATgtgt                                                                                                                             >  1:470296/1‑174 (MQ=255)                                                                                                                                                                                                 gAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCAt                                                                                             >  1:799594/1‑206 (MQ=255)                                                                                                                                                                                                 gAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAGGTATTTTGATATGCCATCGGCGGT‑AAAAATTCAAGCCGGAAc                                                <  1:468864/250‑1 (MQ=255)                                                                                                                                                                                                      aCGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAGGTATTTTGATATGCCATCGGCGGT‑AAAAATTCAAACCGGAACTGTTc                                           >  1:831791/1‑250 (MQ=255)                                                                                                                                                                                                         ccGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAGGTATTTTGATATGCCATCGGCGGT‑AAAAATTCAAGCCGGAACTGTTCCGcc                                       <  1:576540/251‑1 (MQ=255)                                                                                                                                                                                                           gTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTc                                                                                                                        >  1:850838/1‑169 (MQ=255)                                                                                                                                                                                                           gTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTc                                                                                                          >  1:123424/1‑183 (MQ=255)                                                                                                                                                                                                           gTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATg                                                                                                <  1:348862/193‑1 (MQ=255)                                                                                                                                                                                                           gTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAGGTATTTTg                                                                                   >  1:158850/1‑206 (MQ=255)                                                                                                                                                                                                           gTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAGGTATTTTGATATGCCATCGGCGGT‑AAAAATTCAAGCCGGGACTGTTCCGcccg                                     >  1:68268/1‑249 (MQ=255)                                                                                                                                                                                                           gTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAGGTATTTTGATATGCCATCGGCGGT‑AAAAAATTAAACCGGAACTGTTTCGcccg                                     >  1:175743/1‑249 (MQ=255)                                                                                                                                                                                                                aCGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAGGTATTTTGATATGCCATCGGCGGT‑AAAAAATTAAACCGGAACTGTTCCGCCCGTAAtt                                >  1:180647/1‑251 (MQ=255)                                                                                                                                                                                                                 cGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAGGTATTTTGATATGCCATCGGCGGT‑AAAAAATCAAACCCGAACTGTTTCCCCACTAAttt                               >  1:532941/1‑250 (MQ=255)                                                                                                                                                                                                                     aaGCAGGTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAGGTATTTTGATATGCCATCGGCGGTAAAAAATTC‑AGCCGGAACTGTTTCCCCAATAAttttttt                           >  1:635245/1‑250 (MQ=255)                                                                                                                                                                                                                          ggTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAGGTATTTTGa                                                                                  >  1:901726/1‑192 (MQ=255)                                                                                                                                                                                                                          ggTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAGGTATTTTGATATGCCATCGGCGGT‑AAAAATTCAAGCCGGGAATGTTTCGCCAGTAATTGTTTACTCAg                      >  1:460958/1‑251 (MQ=255)                                                                                                                                                                                                                           gTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCAcc                                                                                                                                                                       >  1:876138/1‑106 (MQ=255)                                                                                                                                                                                                                           gTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAGGTATTTTGATATGCCATCGGCGGT‑AAAAATTCAAGCCGGAACTGTTCCGCCAGTAATTGTTTACTc                        <  1:46748/248‑1 (MQ=255)                                                                                                                                                                                                                           gTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAGGTATTTTGATATGCCATCGGCGGT‑AAAAATTCAAACCGGAAATGTTCCGCCAGTAATTGTTTTCTCAg                      >  1:826530/1‑250 (MQ=255)                                                                                                                                                                                                                           gTTCAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAGGTATTTTGATATGCCATCGGCGGT‑AAAAAATCAAACCGGAACTGTTCCGCCAGTAAATGTTTATTCaa                      >  1:547161/1‑249 (MQ=255)                                                                                                                                                                                                                              cAAGGGTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACt                                                                                                       >  1:826319/1‑167 (MQ=255)                                                                                                                                                                                                                                 gggTGACAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCAt                                                                                             >  1:207543/1‑174 (MQ=255)                                                                                                                                                                                                                                       cAATATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAGGTATTTTGATATGCCATCGGCGGT‑AAAAAATTAAACCGGAACTGTTCCGCCAGGAATTGTTTTCTCAGCTGATAAATGGtt         >  1:490782/1‑251 (MQ=255)                                                                                                                                                                                                                                        aaTATGAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAGGTATTTTg                                                                                   >  1:27956/1‑177 (MQ=255)                                                                                                                                                                                                                                             gAACTAAACTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAGGTATTTTGATATGCCATCGGCGGT‑AAAAAATTAAACCGGAACTGTTTCGCCAGGAATTGTTTTTTCAACTGGTAAGGGGGTTCAggg   >  1:524181/1‑250 (MQ=255)                                                                                                                                                                                                                                              aactaaactaATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAGGTATTTTGATATGCCATCGGCGGT‑AAAAATTTAAACCGGAACTGTTTCGCCCGGAATTGTTTTCTCAGCTGATAAg              >  1:3881/1‑239 (MQ=255)                                                                                                                                                                                                                                              aactaaactaATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAGGTATTTTGATATGCCATCGGCGGT‑AAAAATTCAAGCCGGAACTGTTCCGCCAGTAATTGTTTACTCAGCTGATAAGTGGTTTCAGgag  <  1:262430/251‑1 (MQ=255)                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                     TTCGGAAATACGATTGGCGAGGCGGTTAAGTGCGGTCAGAACCTGCGGATTTTTTGCTGCAAAATCGGCTTTCATTAGTGGCGCACCTTGATAGGCAGGGAATAAATTAATGTCGTCTTTCAGTAAGTGGAGCTGATGTTGTTTGAGTTCTGCGTCAGTAGAAAATGCTTCGATTAAATCAATTTTATTGTTGAGTAACGCCGTATAACGCAAAGCAGGTTCAAGGGTGACAATATGAACTAAAGTAATGCCTTGTGATTTTATTCCTTTATAGCCATCGACTCGATCGAGAAATTCCAGTGTGAAGCCGGCGCGAATGTCACCTGCCACATGATGTAAATCGCTGATTGTTGCAAGCCCATGTGTTGCTCCATAGGCTTCTTTCACTGCTAATGCATAGGTATTTTGATATGCCATCGGCGGT‑AAAAATTCAAGCCGGAACTGTTCCGCCAGTAATTGTTTACTCAGCTGATAAGTGGTTTCAGGAG  >  1/1092087‑1092574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑